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Info page for variable 8180034 (#13905)

Internal ID: 13905
Label in dataset: 8180034
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Accession Number: NM_000544
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Gene Information: Entrez ID 6891
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Gene Symbol TAP2, transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
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miRBase: Accession -na-
Chromosome location:
Chromosome Location
6 -32,793,187 (antisense)
6 -32,789,609 (antisense)
6_apd_hap1 -4,080,359 (antisense)
6_apd_hap1 -4,076,762 (antisense)
6_cox_hap2 -4,237,716 (antisense)
6_cox_hap2 -4,234,139 (antisense)
6_dbb_hap3 -4,074,733 (antisense)
6_dbb_hap3 -4,071,135 (antisense)
6_mann_hap4 -4,250,382 (antisense)
6_mann_hap4 -4,246,805 (antisense)
6_mcf_hap5 -4,130,075 (antisense)
6_mcf_hap5 -4,126,505 (antisense)
6_qbl_hap6 -4,025,293 (antisense)
6_qbl_hap6 -4,021,716 (antisense)
6_ssto_hap7 -4,224,129 (antisense)
6_ssto_hap7 -4,220,532 (antisense)
KEGG Pathways:
Pathway Description
02010 ABC transporters
04145 Phagosome
05340 Primary immunodeficiency
04612 Antigen processing and presentation
Gene Ontology:
GOID Evidence Ontology Description(GO Term)
GO:0002489 IMPInferred from Mutant Phenotype BPBiological Process antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent
GO:0015031 IEAInferred from Electronic Annotation BPBiological Process protein transport
GO:0019060 IMPInferred from Mutant Phenotype BPBiological Process intracellular transport of viral proteins in host cell
GO:0019885 IDAInferred from Direct Assay BPBiological Process antigen processing and presentation of endogenous peptide antigen via MHC class I
GO:0019885 IMPInferred from Mutant Phenotype BPBiological Process antigen processing and presentation of endogenous peptide antigen via MHC class I
GO:0044419 IEAInferred from Electronic Annotation BPBiological Process interspecies interaction between organisms
GO:0046967 IMPInferred from Mutant Phenotype BPBiological Process cytosol to ER transport
GO:0046968 IDAInferred from Direct Assay BPBiological Process peptide antigen transport
GO:0046968 IMPInferred from Mutant Phenotype BPBiological Process peptide antigen transport
GO:0055085 IEAInferred from Electronic Annotation BPBiological Process transmembrane transport
GO:0016020 IEAInferred from Electronic Annotation CCCellular Component membrane
GO:0016021 IDAInferred from Direct Assay CCCellular Component integral to membrane
GO:0005783 IDAInferred from Direct Assay CCCellular Component endoplasmic reticulum
GO:0005634 IDAInferred from Direct Assay CCCellular Component nucleus
GO:0005789 IEAInferred from Electronic Annotation CCCellular Component endoplasmic reticulum membrane
GO:0030176 IDAInferred from Direct Assay CCCellular Component integral to endoplasmic reticulum membrane
GO:0042825 IDAInferred from Direct Assay CCCellular Component TAP complex
GO:0000166 IEAInferred from Electronic Annotation MFMolecular Function nucleotide binding
GO:0005515 IPIInferred from Physical Interaction MFMolecular Function protein binding
GO:0042626 IEAInferred from Electronic Annotation MFMolecular Function ATPase activity, coupled to transmembrane movement of substances
GO:0005215 IDAInferred from Direct Assay MFMolecular Function transporter activity
GO:0005524 IDAInferred from Direct Assay MFMolecular Function ATP binding
GO:0016887 IEAInferred from Electronic Annotation MFMolecular Function ATPase activity
GO:0015197 IGIInferred from Genetic Interaction MFMolecular Function peptide transporter activity
GO:0015433 IMPInferred from Mutant Phenotype MFMolecular Function peptide antigen-transporting ATPase activity
GO:0046978 IPIInferred from Physical Interaction MFMolecular Function TAP1 binding
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Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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