[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
1598 7955855 NM_014212 HOXC11 link to infopage homeobox C11

Fetching correlation data, please wait...
Getting list of correlations for id 1598.
Getting list of p-values for id 1598.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.125 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7955855 8077490 NM_014583 LMCD1 link to infopage 0.748326 4.522569e-20 7.836255e-16 7.836255e-16
2 7955855 7930956 NM_007190 SEC23IP link to infopage -0.735043 4.392335e-19 7.610599e-15 3.805300e-15
3 7955855 8171762 NM_004586 RPS6KA3 link to infopage -0.734432 4.860521e-19 8.421824e-15 2.807275e-15
4 7955855 8100714 NM_001031732 YTHDC1 link to infopage -0.731116 8.382075e-19 1.452362e-14 3.630905e-15
5 7955855 8093826 NM_000683 ADRA2C link to infopage 0.729375 1.112191e-18 1.927094e-14 3.854188e-15
6 7955855 7914791 NM_005066 SFPQ link to infopage -0.728571 1.266493e-18 2.194452e-14 3.657421e-15
7 7955855 7944850 NM_032811 TBRG1 link to infopage -0.727558 1.490737e-18 2.583001e-14 3.690001e-15
8 7955855 8126018 NM_007271 STK38 link to infopage -0.724183 2.552723e-18 4.423103e-14 5.528879e-15
9 7955855 8150928 NM_003580 NSMAF link to infopage -0.723562 2.815824e-18 4.878978e-14 5.421087e-15
10 7955855 7972069 NM_015057 MYCBP2 link to infopage -0.722978 3.086856e-18 5.348595e-14 5.348595e-15
11 7955855 8116664 NM_003913 PRPF4B link to infopage -0.722503 3.326155e-18 5.763229e-14 5.239299e-15
12 7955855 8103106 NM_006726 LRBA link to infopage -0.722317 3.425071e-18 5.934621e-14 4.945517e-15
13 7955855 8098512 NM_021942 C4orf41 link to infopage -0.719503 5.311144e-18 9.202620e-14 7.078938e-15
14 7955855 7930380 NM_016824 ADD3 link to infopage -0.718541 6.163832e-18 1.068007e-13 7.628622e-15
15 7955855 7937433 NM_000797 DRD4 link to infopage 0.716266 8.741360e-18 1.514616e-13 1.009744e-14
16 7955855 7925565 NM_031844 HNRNPU link to infopage -0.711831 1.710772e-17 2.964254e-13 1.852659e-14
17 7955855 7974066 NM_002687 PNN link to infopage -0.711620 1.765837e-17 3.059666e-13 1.799803e-14
18 7955855 8152148 NM_015902 UBR5 link to infopage -0.710210 2.179891e-17 3.777096e-13 2.098387e-14
19 7955855 8062492 NM_020336 RALGAPB link to infopage -0.710054 2.231125e-17 3.865869e-13 2.034668e-14
20 7955855 7977693 NM_020920 CHD8 link to infopage -0.709690 2.355330e-17 4.081081e-13 2.040541e-14
21 7955855 8163275 NM_001080398 KIAA0368 link to infopage -0.709424 2.450174e-17 4.245416e-13 2.021627e-14
22 7955855 7925531 NM_181690 AKT3 link to infopage -0.708816 2.681491e-17 4.646220e-13 2.111918e-14
23 7955855 7989253 NM_024755 SLTM link to infopage -0.708660 2.743868e-17 4.754299e-13 2.067087e-14
24 7955855 8006638 NM_024835 GGNBP2 link to infopage -0.708306 2.891721e-17 5.010486e-13 2.087702e-14
25 7955855 7916185 NM_001009881 ZCCHC11 link to infopage -0.708024 3.014287e-17 5.222855e-13 2.089142e-14
26 7955855 7926283 NM_003675 PRPF18 link to infopage -0.707550 3.232843e-17 5.601547e-13 2.154441e-14
27 7955855 8068289 NM_138927 SON link to infopage -0.706797 3.611223e-17 6.257167e-13 2.317469e-14
28 7955855 7929201 NM_003972 BTAF1 link to infopage -0.706387 3.835025e-17 6.644947e-13 2.373195e-14
29 7955855 8066009 NM_184234 RBM39 link to infopage -0.705984 4.068074e-17 7.048751e-13 2.430604e-14
30 7955855 8095163 NM_001024924 EXOC1 link to infopage -0.705677 4.254999e-17 7.372636e-13 2.457545e-14
31 7955855 8062880 NM_003404 YWHAB link to infopage -0.705644 4.275696e-17 7.408498e-13 2.389838e-14
32 7955855 7920766 NM_018489 ASH1L link to infopage -0.705554 4.332199e-17 7.506401e-13 2.345750e-14
33 7955855 8050565 NM_015317 PUM2 link to infopage -0.705550 4.335059e-17 7.511357e-13 2.276169e-14
34 7955855 7907790 NM_014810 CEP350 link to infopage -0.705415 4.420905e-17 7.660102e-13 2.252971e-14
35 7955855 8052443 NM_014709 USP34 link to infopage -0.703496 5.843761e-17 1.012548e-12 2.892995e-14
36 7955855 7916443 NM_015306 USP24 link to infopage -0.703263 6.044575e-17 1.047344e-12 2.909288e-14
37 7955855 8139165 NM_014396 VPS41 link to infopage -0.703136 6.156686e-17 1.066769e-12 2.883159e-14
38 7955855 7960221 NM_005056 KDM5A link to infopage -0.702393 6.853516e-17 1.187509e-12 3.125023e-14
39 7955855 8085815 NM_001068 TOP2B link to infopage -0.701744 7.524925e-17 1.303844e-12 3.343189e-14
40 7955855 7898377 NM_014675 CROCC link to infopage 0.701623 7.657096e-17 1.326745e-12 3.316863e-14
41 7955855 8003758 NM_000430 PAFAH1B1 link to infopage -0.701160 8.183205e-17 1.417904e-12 3.458302e-14
42 7955855 8067011 NM_015339 ADNP link to infopage -0.700724 8.710663e-17 1.509297e-12 3.593563e-14
43 7955855 8100251 NM_015030 FRYL link to infopage -0.700494 9.003278e-17 1.559998e-12 3.627902e-14
44 7955855 8141643 NM_001015072 UFSP1 link to infopage 0.700121 9.496200e-17 1.645407e-12 3.739560e-14
45 7955855 8138670 NM_031243 HNRNPA2B1 link to infopage -0.700058 9.580999e-17 1.660100e-12 3.689110e-14
46 7955855 8089930 NM_004487 GOLGB1 link to infopage -0.700045 9.599531e-17 1.663311e-12 3.615893e-14
47 7955855 7910520 NM_014236 GNPAT link to infopage -0.698648 1.171111e-16 2.029185e-12 4.317414e-14
48 7955855 8048146 NM_021141 XRCC5 link to infopage -0.698568 1.184525e-16 2.052426e-12 4.275888e-14
49 7955855 8105714 NM_139168 SFRS12 link to infopage -0.698125 1.261282e-16 2.185423e-12 4.460047e-14
50 7955855 7902269 NM_004768 SRSF11 link to infopage -0.698080 1.269388e-16 2.199469e-12 4.398937e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!