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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
2566 7902074 NM_002303 LEPR link to infopage leptin receptor

Fetching correlation data, please wait...
Getting list of correlations for id 2566.
Getting list of p-values for id 2566.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.127 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7902074 8041197 NM_001127401 YPEL5 link to infopage 0.699448 1.045291e-16 1.811176e-12 1.811176e-12
2 7902074 8129458 NM_033515 ARHGAP18 link to infopage 0.696183 1.658905e-16 2.874384e-12 1.437192e-12
3 7902074 8112967 NM_174909 TMEM167A link to infopage 0.695727 1.768494e-16 3.064270e-12 1.021423e-12
4 7902074 8053562 NM_016079 VPS24 link to infopage 0.690425 3.691296e-16 6.395909e-12 1.598977e-12
5 7902074 7935707 NM_001278 CHUK link to infopage 0.687930 5.189940e-16 8.992609e-12 1.798522e-12
6 7902074 8058552 NM_005896 IDH1 link to infopage 0.686712 6.122158e-16 1.060786e-11 1.767977e-12
7 7902074 8020903 NM_020474 GALNT1 link to infopage 0.685589 7.123598e-16 1.234306e-11 1.763294e-12
8 7902074 8146000 NM_003816 ADAM9 link to infopage 0.684001 8.815739e-16 1.527503e-11 1.909379e-12
9 7902074 8083656 NM_022736 MFSD1 link to infopage 0.683721 9.151947e-16 1.585758e-11 1.761953e-12
10 7902074 8117372 NM_003512 HIST1H2AC link to infopage 0.681369 1.251526e-15 2.168519e-11 2.168519e-12
11 7902074 8167006 NM_006915 RP2 link to infopage 0.678851 1.743770e-15 3.021430e-11 2.746754e-12
12 7902074 8151401 NM_001001481 UBE2W link to infopage 0.677575 2.060436e-15 3.570118e-11 2.975098e-12
13 7902074 8135464 NM_000108 DLD link to infopage 0.676682 2.314602e-15 4.010511e-11 3.085009e-12
14 7902074 8055890 NM_005843 STAM2 link to infopage 0.669511 5.803466e-15 1.005567e-10 7.182619e-12
15 7902074 8135625 NM_006136 CAPZA2 link to infopage 0.667432 7.539813e-15 1.306423e-10 8.709489e-12
16 7902074 7932616 NM_005470 ABI1 link to infopage 0.667185 7.777184e-15 1.347553e-10 8.422204e-12
17 7902074 8124273 NM_030939 C6orf62 link to infopage 0.667005 7.954342e-15 1.378249e-10 8.107346e-12
18 7902074 7927786 NM_001001330 REEP3 link to infopage 0.666430 8.547310e-15 1.480992e-10 8.227735e-12
19 7902074 7917455 NM_004261 SEP15 link to infopage 0.665296 9.844826e-15 1.705813e-10 8.977963e-12
20 7902074 8041122 NM_002709 PPP1CB link to infopage 0.665102 1.008616e-14 1.747629e-10 8.738145e-12
21 7902074 8016562 NM_001007230 SPOP link to infopage 0.663813 1.183397e-14 2.050473e-10 9.764156e-12
22 7902074 8171896 BC020611 CXorf21 link to infopage 0.662857 1.331608e-14 2.307277e-10 1.048762e-11
23 7902074 8160346 NM_001010915 PTPLAD2 link to infopage 0.656695 2.820442e-14 4.886981e-10 2.124774e-11
24 7902074 7918902 NR_026665 CD58 link to infopage 0.656352 2.939417e-14 5.093128e-10 2.122137e-11
25 7902074 8063345 NR_002433 SNORD12C link to infopage 0.655999 3.066492e-14 5.313310e-10 2.125324e-11
26 7902074 8081055 NM_014043 CHMP2B link to infopage 0.655327 3.324006e-14 5.759505e-10 2.215194e-11
27 7902074 7908376 NM_130782 RGS18 link to infopage 0.655150 3.395117e-14 5.882720e-10 2.178785e-11
28 7902074 8129317 NM_020755 SERINC1 link to infopage 0.654861 3.514443e-14 6.089475e-10 2.174813e-11
29 7902074 8046726 NM_001130445 SSFA2 link to infopage 0.654569 3.639403e-14 6.305994e-10 2.174481e-11
30 7902074 8054771 NM_025181 SLC35F5 link to infopage 0.654561 3.642919e-14 6.312085e-10 2.104028e-11
31 7902074 7980580 NM_000153 GALC link to infopage 0.654256 3.778025e-14 6.546183e-10 2.111672e-11
32 7902074 7936706 NM_024834 C10orf119 link to infopage 0.654008 3.891434e-14 6.742687e-10 2.107090e-11
33 7902074 8089527 NM_022488 ATG3 link to infopage 0.652824 4.479605e-14 7.761811e-10 2.352064e-11
34 7902074 8067017 NM_003859 DPM1 link to infopage 0.651172 5.446340e-14 9.436874e-10 2.775551e-11
35 7902074 8132055 NM_152793 C7orf41 link to infopage 0.651092 5.498242e-14 9.526804e-10 2.721944e-11
36 7902074 8143132 NM_001128619 LUZP6 link to infopage 0.651039 5.532412e-14 9.586010e-10 2.662781e-11
37 7902074 7983502 NM_012388 PLDN link to infopage 0.650925 5.607039e-14 9.715317e-10 2.625761e-11
38 7902074 7943424 NM_001166 BIRC2 link to infopage 0.650319 6.021854e-14 1.043407e-9 2.745807e-11
39 7902074 7959597 NM_006815 TMED2 link to infopage 0.650207 6.101342e-14 1.057180e-9 2.710717e-11
40 7902074 7979671 NM_145113 MAX link to infopage 0.647011 8.862470e-14 1.535600e-9 3.839000e-11
41 7902074 8152222 NM_015878 AZIN1 link to infopage 0.646873 9.005529e-14 1.560388e-9 3.805824e-11
42 7902074 7969979 NM_032859 ABHD13 link to infopage 0.646662 9.228297e-14 1.598987e-9 3.807112e-11
43 7902074 8110022 NM_003945 ATP6V0E1 link to infopage 0.646343 9.576176e-14 1.659264e-9 3.858754e-11
44 7902074 7900413 NM_005857 ZMPSTE24 link to infopage 0.645848 1.014034e-13 1.757016e-9 3.993218e-11
45 7902074 8146216 NM_001135694 VDAC3 link to infopage 0.645722 1.028987e-13 1.782926e-9 3.962057e-11
46 7902074 7920839 NM_006912 RIT1 link to infopage 0.645146 1.099685e-13 1.905425e-9 4.142228e-11
47 7902074 8127637 NM_018247 TMEM30A link to infopage 0.644871 1.135110e-13 1.966805e-9 4.184692e-11
48 7902074 8112728 NM_001089704 RAP1BL link to infopage 0.642171 1.546917e-13 2.680342e-9 5.584047e-11
49 7902074 7938592 NM_032228 FAR1 link to infopage 0.642132 1.553781e-13 2.692237e-9 5.494360e-11
50 7902074 8131975 NM_006024 TAX1BP1 link to infopage 0.642079 1.563188e-13 2.708537e-9 5.417073e-11

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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