[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
6511	8005305	NM_024052	C17orf39		chromosome 17 open reading frame 39

Fetching correlation data, please wait...
Getting list of correlations for id 6511.
Getting list of p-values for id 6511.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.125 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8005305	8023466	NM_001012515	FECH	0.805986	3.389505e-25	5.872995e-21	5.872995e-21
2	8005305	8043413	NM_144563	RPIA	0.798978	1.739619e-24	3.014237e-20	1.507119e-20
3	8005305	7930398	NM_005962	MXI1	0.790653	1.118794e-23	1.938534e-19	6.461781e-20
4	8005305	8013307	NR_026718	FOXO3B	0.775199	2.858517e-22	4.952952e-18	1.238238e-18
5	8005305	7932530	NM_005028	PIP4K2A	0.773617	3.926271e-22	6.803050e-18	1.360610e-18
6	8005305	8144953	NM_001100161	XPO7	0.771922	5.499688e-22	9.529309e-18	1.588218e-18
7	8005305	8030470	NM_014203	AP2A1	0.771476	6.006366e-22	1.040723e-17	1.486747e-18
8	8005305	8175177	NM_018388	MBNL3	0.769219	9.358375e-22	1.621526e-17	2.026907e-18
9	8005305	7970317	NR_026580	TFDP1	0.766022	1.738602e-21	3.012476e-17	3.347195e-18
10	8005305	8164464	NM_006336	ZER1	0.761221	4.327074e-21	7.497522e-17	7.497522e-18
11	8005305	8156706	NM_003275	TMOD1	0.760479	4.972833e-21	8.616428e-17	7.833116e-18
12	8005305	8119926	NM_018426	TMEM63B	0.759865	5.577425e-21	9.664004e-17	8.053337e-18
13	8005305	8138789	NM_175061	JAZF1	0.755676	1.208516e-20	2.093995e-16	1.610765e-17
14	8005305	7901376	NM_014372	RNF11	0.754365	1.534308e-20	2.658495e-16	1.898925e-17
15	8005305	8168205	NM_005938	FOXO4	0.753937	1.658331e-20	2.873390e-16	1.915593e-17
16	8005305	7921133	NM_004494	HDGF	0.752030	2.339095e-20	4.052949e-16	2.533093e-17
17	8005305	8022941	NM_015476	C18orf10	0.750543	3.052125e-20	5.288417e-16	3.110834e-17
18	8005305	7929061	NM_001010987	IFIT1B	0.748876	4.104278e-20	7.111483e-16	3.950824e-17
19	8005305	7923503	NM_015999	ADIPOR1	0.748597	4.311201e-20	7.470018e-16	3.931588e-17
20	8005305	7904361	NM_017709	FAM46C	0.745289	7.700935e-20	1.334341e-15	6.671705e-17
21	8005305	7933228	NM_001002265	MARCH8	0.740013	1.906793e-19	3.303900e-15	1.573286e-16
22	8005305	8079796	NM_022064	RNF123	0.738541	2.446309e-19	4.238719e-15	1.926690e-16
23	8005305	8136341	NM_199186	BPGM	0.738500	2.463291e-19	4.268145e-15	1.855715e-16
24	8005305	8018708	NM_022066	UBE2O	0.737577	2.877019e-19	4.985012e-15	2.077088e-16
25	8005305	8072113	NM_001013694	SRRD	0.735215	4.269051e-19	7.396985e-15	2.958794e-16
26	8005305	8166723	NM_021083	XK	0.734650	4.688182e-19	8.123212e-15	3.124312e-16
27	8005305	8101762	NM_000345	SNCA	0.734556	4.762261e-19	8.251569e-15	3.056137e-16
28	8005305	8075009	NM_031444	C22orf13	0.734486	4.817387e-19	8.347087e-15	2.981103e-16
29	8005305	7959173	NM_014868	RNF10	0.731938	7.328067e-19	1.269734e-14	4.378394e-16
30	8005305	8035494	NM_012181	FKBP8	0.728709	1.238597e-18	2.146118e-14	7.153725e-16
31	8005305	8058221	NM_015049	TRAK2	0.728436	1.294382e-18	2.242775e-14	7.234759e-16
32	8005305	8092552	NM_006548	IGF2BP2	0.726095	1.883890e-18	3.264216e-14	1.020068e-15
33	8005305	8063583	NM_017495	RBM38	0.724755	2.331435e-18	4.039678e-14	1.224145e-15
34	8005305	7919193	NR_002212	NUDT4P1	0.724463	2.441684e-18	4.230706e-14	1.244325e-15
35	8005305	7944560	NM_015313	ARHGEF12	0.724372	2.477216e-18	4.292273e-14	1.226364e-15
36	8005305	8145005	NM_001978	EPB49	0.723383	2.896096e-18	5.018065e-14	1.393907e-15
37	8005305	8018097	NM_001098832	FAM104A	0.721751	3.742273e-18	6.484236e-14	1.752496e-15
38	8005305	8142886	NM_003344	UBE2H	0.718778	5.942315e-18	1.029625e-13	2.709539e-15
39	8005305	8002087	NM_020850	RANBP10	0.716754	8.112461e-18	1.405646e-13	3.604221e-15
40	8005305	8119169	NM_017772	TBC1D22B	0.716678	8.207863e-18	1.422176e-13	3.555441e-15
41	8005305	8032815	NM_025241	UBXN6	0.715562	9.733466e-18	1.686518e-13	4.113458e-15
42	8005305	8063478	NM_080821	C20orf108	0.715386	9.997386e-18	1.732247e-13	4.124398e-15
43	8005305	8075285	NM_032204	ASCC2	0.715044	1.053146e-17	1.824785e-13	4.243687e-15
44	8005305	8065569	NM_138578	BCL2L1	0.714254	1.187268e-17	2.057178e-13	4.675406e-15
45	8005305	8005707	NM_002756	MAP2K3	0.713274	1.377096e-17	2.386094e-13	5.302431e-15
46	8005305	8143387	NM_013446	MKRN1	0.712501	1.547046e-17	2.680567e-13	5.827321e-15
47	8005305	7923967	NM_018566	YOD1	0.712135	1.634658e-17	2.832371e-13	6.026322e-15
48	8005305	8078227	NM_003884	KAT2B	0.709744	2.336623e-17	4.048667e-13	8.434723e-15
49	8005305	8034299	NM_032377	ELOF1	0.709077	2.579628e-17	4.469721e-13	9.121880e-15
50	8005305	7911218	NM_015431	TRIM58	0.706659	3.685443e-17	6.385767e-13	1.277153e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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