[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 1.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
1 28S rRNA link to infopage

Fetching correlation data, please wait...
Getting list of correlations for id 1.
Getting list of p-values for id 1.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.091 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 28S rRNA hsa-miR-15b-3p link to infopage -0.657727 2.490474e-14 4.315244e-10 4.315244e-10
2 28S rRNA hsa-miR-661 MI0003669 link to infopage 0.641235 1.720730e-13 2.981508e-9 1.490754e-9
3 28S rRNA hsa-miR-148b-5p link to infopage -0.606206 7.246177e-12 1.255545e-7 4.185150e-8
4 28S rRNA hsa-miR-124 link to infopage 0.605964 7.424127e-12 1.286378e-7 3.215946e-8
5 28S rRNA RNU11 link to infopage 0.589849 3.570574e-11 6.186733e-7 1.237347e-7
6 28S rRNA SNORD43 link to infopage 0.589709 3.618156e-11 6.269179e-7 1.044863e-7
7 28S rRNA 7997904 AK295122 ZNF778 link to infopage -0.566810 2.917158e-10 5.054559e-6 7.220799e-7
8 28S rRNA hsa-miR-454-5p link to infopage -0.563415 3.922242e-10 6.796069e-6 8.495087e-7
9 28S rRNA hsa-miR-331-3p link to infopage -0.550984 1.127313e-9 1.953295e-5 2.170328e-6
10 28S rRNA 7897801 NR_002754 RNU5E link to infopage 0.519898 1.318664e-8 2.284849e-4 2.284849e-5
11 28S rRNA 8141445 BC015722 C7orf43 link to infopage 0.518523 1.461964e-8 2.533146e-4 2.302860e-5
12 28S rRNA 8039316 NM_017607 PPP1R12C link to infopage 0.514759 1.934509e-8 3.351923e-4 2.793269e-5
13 28S rRNA 8127423 ENST00000408661 link to infopage 0.507477 3.294046e-8 5.707594e-4 4.390457e-5
14 28S rRNA RNU6-2 link to infopage 0.501271 5.134372e-8 8.896326e-4 6.354519e-5
15 28S rRNA 7951030 NR_003036 SNORD6 link to infopage -0.499395 5.861676e-8 1.015653e-3 6.771018e-5
16 28S rRNA hsa-miR-192 MI0000234 link to infopage -0.493113 9.081687e-8 1.573584e-3 9.834899e-5
17 28S rRNA 8043697 NM_025190 ANKRD36B link to infopage -0.490517 1.085518e-7 1.880876e-3 1.106398e-4
18 28S rRNA 8038962 NM_001102657 ZNF836 link to infopage -0.488595 1.237585e-7 2.144364e-3 1.191313e-4
19 28S rRNA hsa-miR-22 MI0000078 link to infopage 0.485674 1.508143e-7 2.613159e-3 1.375347e-4
20 28S rRNA 8014574 NM_007010 DDX52 link to infopage -0.485133 1.564096e-7 2.710110e-3 1.355055e-4
21 28S rRNA 8052956 NM_015189 EXOC6B link to infopage -0.484445 1.638179e-7 2.838473e-3 1.351654e-4
22 28S rRNA 8030946 NM_001039886 ZNF808 link to infopage -0.482565 1.857702e-7 3.218840e-3 1.463109e-4
23 28S rRNA hsa-miR-135a-3p link to infopage 0.481595 1.981705e-7 3.433701e-3 1.492914e-4
24 28S rRNA 8030980 NR_003699 ZNF525 link to infopage -0.477898 2.530563e-7 4.384706e-3 1.826961e-4
25 28S rRNA 7984620 ENST00000364003 link to infopage 0.473530 3.365543e-7 5.831476e-3 2.332590e-4
26 28S rRNA 7953383 NR_004387 SCARNA10 link to infopage 0.466937 5.137421e-7 8.901610e-3 3.423696e-4
27 28S rRNA 7929719 NM_014472 C10orf28 link to infopage -0.459817 8.032482e-7 1.391788e-2 5.154771e-4
28 28S rRNA 7937314 NM_025092 ATHL1 link to infopage 0.458912 8.495386e-7 1.471996e-2 5.257127e-4
29 28S rRNA 8027352 link to infopage -0.458727 8.593492e-7 1.488994e-2 5.134464e-4
30 28S rRNA hsa-miR-21-3p link to infopage 0.457153 9.470007e-7 1.640868e-2 5.469560e-4
31 28S rRNA 8116494 NM_152283 ZFP62 link to infopage -0.456006 1.016125e-6 1.760639e-2 5.679482e-4
32 28S rRNA hsa-miR-760 MI0005567 link to infopage 0.454723 1.099110e-6 1.904427e-2 5.951335e-4
33 28S rRNA 8178771 NM_001136 AGER link to infopage 0.454531 1.112058e-6 1.926863e-2 5.838977e-4
34 28S rRNA 7900192 NM_198446 C1orf122 link to infopage 0.453759 1.165673e-6 2.019762e-2 5.940477e-4
35 28S rRNA 8019709 link to infopage 0.452616 1.249475e-6 2.164965e-2 6.185616e-4
36 28S rRNA 8019802 link to infopage 0.452391 1.266706e-6 2.194821e-2 6.096725e-4
37 28S rRNA 7920873 NR_002974 SNORA42 link to infopage 0.450976 1.379857e-6 2.390878e-2 6.461832e-4
38 28S rRNA 8024120 NM_019112 ABCA7 link to infopage 0.450301 1.437169e-6 2.490183e-2 6.553114e-4
39 28S rRNA 7936891 NM_212554 METTL10 link to infopage -0.449952 1.467713e-6 2.543106e-2 6.520784e-4
40 28S rRNA 8000692 NM_001031827 BOLA2 link to infopage -0.449623 1.496985e-6 2.593826e-2 6.484565e-4
41 28S rRNA 8053801 NM_025190 ANKRD36B link to infopage -0.449400 1.517143e-6 2.628754e-2 6.411596e-4
42 28S rRNA 8082523 NM_052985 IFT122 link to infopage 0.449068 1.547706e-6 2.681710e-2 6.385023e-4
43 28S rRNA 8054054 NM_025190 ANKRD36B link to infopage -0.447529 1.697024e-6 2.940433e-2 6.838217e-4
44 28S rRNA hsa-miR-744-3p link to infopage -0.446572 1.796579e-6 3.112933e-2 7.074847e-4
45 28S rRNA 7941272 NR_002819 MALAT1 link to infopage -0.446335 1.822091e-6 3.157137e-2 7.015860e-4
46 28S rRNA 8141535 NM_002319 LRCH4 link to infopage 0.445840 1.876563e-6 3.251521e-2 7.068524e-4
47 28S rRNA hsa-miR-18a-3p link to infopage -0.445549 1.909220e-6 3.308105e-2 7.038521e-4
48 28S rRNA tRNA fragment link to infopage 0.445463 1.918978e-6 3.325014e-2 6.927112e-4
49 28S rRNA 8043687 AK304740 ANKRD36 link to infopage -0.444126 2.076980e-6 3.598782e-2 7.344454e-4
50 28S rRNA 8019705 link to infopage 0.443745 2.124252e-6 3.680691e-2 7.361382e-4

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!