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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 10626.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
10626 8125341 NM_001136 AGER link to infopage advanced glycosylation end product-specific receptor

Fetching correlation data, please wait...
Getting list of correlations for id 10626.
Getting list of p-values for id 10626.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.099 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8125341 8178771 NM_001136 AGER link to infopage 0.985587 2.615196e-81 4.531350e-77 4.531350e-77
2 8125341 8179967 NM_001136 AGER link to infopage 0.968577 4.622993e-64 8.010260e-60 4.005130e-60
3 8125341 7949124 NM_005609 PYGM link to infopage 0.671899 4.285278e-15 7.425100e-11 2.475033e-11
4 8125341 7965048 NM_004537 NAP1L1 link to infopage -0.658321 2.317546e-14 4.015612e-10 1.003903e-10
5 8125341 8030980 NR_003699 ZNF525 link to infopage -0.656370 2.932853e-14 5.081754e-10 1.016351e-10
6 8125341 8156604 BC022957 C9orf102 link to infopage -0.654842 3.522712e-14 6.103803e-10 1.017300e-10
7 8125341 hsa-miR-340-3p link to infopage -0.639600 2.071110e-13 3.588613e-9 5.126589e-10
8 8125341 8047097 NM_014905 GLS link to infopage -0.636735 2.857857e-13 4.951809e-9 6.189762e-10
9 8125341 8054135 NM_012214 MGAT4A link to infopage -0.636512 2.929976e-13 5.076769e-9 5.640855e-10
10 8125341 8051882 NM_133259 LRPPRC link to infopage -0.635373 3.326785e-13 5.764320e-9 5.764320e-10
11 8125341 8047518 NM_015934 NOP58 link to infopage -0.634368 3.719478e-13 6.444740e-9 5.858854e-10
12 8125341 8036813 NM_001005851 ZNF780B link to infopage -0.634314 3.741943e-13 6.483664e-9 5.403054e-10
13 8125341 7943620 NM_000051 ATM link to infopage -0.634161 3.805739e-13 6.594204e-9 5.072465e-10
14 8125341 7961964 NM_018164 C12orf11 link to infopage -0.631963 4.849942e-13 8.403494e-9 6.002496e-10
15 8125341 8105545 NM_016338 IPO11 link to infopage -0.631848 4.911691e-13 8.510488e-9 5.673658e-10
16 8125341 8113010 NM_001239 CCNH link to infopage -0.631135 5.311335e-13 9.202951e-9 5.751844e-10
17 8125341 8131539 NM_018374 TMEM106B link to infopage -0.628488 7.088795e-13 1.228276e-8 7.225150e-10
18 8125341 7992302 NM_020825 CRAMP1L link to infopage 0.626107 9.167809e-13 1.588506e-8 8.825035e-10
19 8125341 8035842 NM_003430 ZNF91 link to infopage -0.624207 1.124052e-12 1.947645e-8 1.025076e-9
20 8125341 8171747 NM_001412 EIF1AX link to infopage -0.623840 1.168958e-12 2.025454e-8 1.012727e-9
21 8125341 7954419 NM_018638 ETNK1 link to infopage -0.622704 1.319242e-12 2.285851e-8 1.088500e-9
22 8125341 8068510 ENST00000362936 link to infopage 0.622300 1.377092e-12 2.386087e-8 1.084585e-9
23 8125341 7956658 NM_004731 SLC16A7 link to infopage -0.620926 1.592830e-12 2.759897e-8 1.199955e-9
24 8125341 7968835 NM_016248 AKAP11 link to infopage -0.619809 1.791875e-12 3.104782e-8 1.293659e-9
25 8125341 8028227 NM_152604 ZNF383 link to infopage -0.618345 2.089350e-12 3.620217e-8 1.448087e-9
26 8125341 7968761 NM_024561 NAA16 link to infopage -0.616813 2.451520e-12 4.247748e-8 1.633749e-9
27 8125341 8027439 NM_001136156 ZNF507 link to infopage -0.616427 2.551920e-12 4.421712e-8 1.637671e-9
28 8125341 8030946 NM_001039886 ZNF808 link to infopage -0.615999 2.667992e-12 4.622829e-8 1.651010e-9
29 8125341 8035773 NM_001099269 ZNF506 link to infopage -0.615938 2.684921e-12 4.652163e-8 1.604194e-9
30 8125341 8144812 NM_006197 PCM1 link to infopage -0.615471 2.818325e-12 4.883312e-8 1.627771e-9
31 8125341 8027352 link to infopage -0.615353 2.852815e-12 4.943072e-8 1.594539e-9
32 8125341 7971513 NM_001984 ESD link to infopage -0.614079 3.254165e-12 5.638492e-8 1.762029e-9
33 8125341 8097480 NM_057175 NAA15 link to infopage -0.612710 3.746395e-12 6.491378e-8 1.967084e-9
34 8125341 8101043 NM_203505 G3BP2 link to infopage -0.612227 3.936256e-12 6.820350e-8 2.005985e-9
35 8125341 8155946 NM_033305 VPS13A link to infopage -0.612135 3.973727e-12 6.885277e-8 1.967222e-9
36 8125341 8038962 NM_001102657 ZNF836 link to infopage -0.610142 4.869705e-12 8.437738e-8 2.343816e-9
37 8125341 8046759 NM_018981 DNAJC10 link to infopage -0.607042 6.662756e-12 1.154456e-7 3.120150e-9
38 8125341 7901299 NM_016308 CMPK1 link to infopage -0.606842 6.798220e-12 1.177928e-7 3.099809e-9
39 8125341 7943297 NM_014679 CEP57 link to infopage -0.606676 6.912050e-12 1.197651e-7 3.070900e-9
40 8125341 7951036 NR_003033 SNORD5 link to infopage -0.606569 6.987058e-12 1.210648e-7 3.026619e-9
41 8125341 8105353 NM_015360 SKIV2L2 link to infopage -0.606092 7.329898e-12 1.270051e-7 3.097686e-9
42 8125341 8162449 NM_031486 ZNF484 link to infopage -0.605418 7.841018e-12 1.358613e-7 3.234793e-9
43 8125341 8047174 NM_001127257 SLC39A10 link to infopage -0.604790 8.349242e-12 1.446673e-7 3.364356e-9
44 8125341 7957737 NM_001032283 TMPO link to infopage -0.604636 8.478542e-12 1.469077e-7 3.338811e-9
45 8125341 8149475 NM_013354 CNOT7 link to infopage -0.604564 8.539408e-12 1.479623e-7 3.288052e-9
46 8125341 7901804 NM_176877 INADL link to infopage -0.604218 8.839124e-12 1.531555e-7 3.329468e-9
47 8125341 8078360 NM_178862 STT3B link to infopage -0.604049 8.989256e-12 1.557568e-7 3.313975e-9
48 8125341 8089299 NM_001777 CD47 link to infopage -0.603029 9.948018e-12 1.723693e-7 3.591027e-9
49 8125341 8043697 NM_025190 ANKRD36B link to infopage -0.602744 1.023285e-11 1.773046e-7 3.618461e-9
50 8125341 7962537 NM_018976 SLC38A2 link to infopage -0.602640 1.033910e-11 1.791457e-7 3.582913e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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