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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 17169.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
17169 8019639 link to infopage

Fetching correlation data, please wait...
Getting list of correlations for id 17169.
Getting list of p-values for id 17169.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.099 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8019639 8019631 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 8019639 8019705 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
3 8019639 8019635 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
4 8019639 8019707 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
5 8019639 8019637 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
6 8019639 8019633 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
7 8019639 8019703 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
8 8019639 8019641 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
9 8019639 8019802 link to infopage 0.968272 7.552095e-64 1.308552e-59 1.453946e-60
10 8019639 8019709 link to infopage 0.967333 3.313294e-63 5.740945e-59 5.740945e-60
11 8019639 7948894 NR_002716 RNU2-1 link to infopage 0.817490 1.990708e-26 3.449299e-22 3.135726e-23
12 8019639 7920873 NR_002974 SNORA42 link to infopage 0.673736 3.387089e-15 5.868808e-11 4.890674e-12
13 8019639 8044961 NR_023343 RNU4ATAC link to infopage 0.652059 4.904889e-14 8.498701e-10 6.537463e-11
14 8019639 8152041 NM_183419 RNF19A link to infopage -0.615399 2.839386e-12 4.919805e-8 3.514146e-9
15 8019639 8062490 NR_002986 SNORA60 link to infopage 0.607906 6.107468e-12 1.058241e-7 7.054940e-9
16 8019639 8170326 NM_002024 FMR1 link to infopage -0.606862 6.784212e-12 1.175500e-7 7.346878e-9
17 8019639 8052307 NM_001122964 SMEK2 link to infopage -0.602405 1.058183e-11 1.833514e-7 1.078537e-8
18 8019639 RNU11 link to infopage 0.602215 1.078240e-11 1.868267e-7 1.037926e-8
19 8019639 8113305 NM_001270 CHD1 link to infopage -0.601988 1.102757e-11 1.910746e-7 1.005656e-8
20 8019639 8162833 NM_015051 ERP44 link to infopage -0.596074 1.966597e-11 3.407523e-7 1.703762e-8
21 8019639 7902166 NM_020948 MIER1 link to infopage -0.595947 1.991081e-11 3.449945e-7 1.642831e-8
22 8019639 7965723 NM_015054 UHRF1BP1L link to infopage -0.595665 2.046095e-11 3.545270e-7 1.611486e-8
23 8019639 7903703 NM_006496 GNAI3 link to infopage -0.593491 2.522669e-11 4.371028e-7 1.900447e-8
24 8019639 8088700 NM_007114 TMF1 link to infopage -0.593096 2.620169e-11 4.539967e-7 1.891653e-8
25 8019639 7907171 NM_003666 BLZF1 link to infopage -0.592644 2.735942e-11 4.740567e-7 1.896227e-8
26 8019639 8034401 NM_144976 ZNF564 link to infopage -0.588972 3.879414e-11 6.721861e-7 2.585331e-8
27 8019639 8052024 NM_025133 FBXO11 link to infopage -0.586492 4.898862e-11 8.488258e-7 3.143799e-8
28 8019639 7930276 NM_014720 SLK link to infopage -0.586297 4.989235e-11 8.644847e-7 3.087445e-8
29 8019639 8118632 hsa-mir-219-1 link to infopage 0.585322 5.465406e-11 9.469908e-7 3.265486e-8
30 8019639 8047401 AK125394 link to infopage -0.584306 6.007882e-11 1.040986e-6 3.469953e-8
31 8019639 7954810 NM_198578 LRRK2 link to infopage -0.582631 7.017792e-11 1.215973e-6 3.922493e-8
32 8019639 8105463 NM_022913 GPBP1 link to infopage -0.581883 7.519869e-11 1.302968e-6 4.071774e-8
33 8019639 8102751 NM_144643 SCLT1 link to infopage -0.580556 8.496983e-11 1.472272e-6 4.461431e-8
34 8019639 8161575 ENST00000377395 link to infopage -0.579637 9.243937e-11 1.601697e-6 4.710873e-8
35 8019639 8169750 NM_001042750 STAG2 link to infopage -0.577382 1.135373e-10 1.967261e-6 5.620747e-8
36 8019639 8161747 NM_001102420 ZFAND5 link to infopage -0.576012 1.285567e-10 2.227502e-6 6.187507e-8
37 8019639 8092933 NM_012287 ACAP2 link to infopage -0.575190 1.384583e-10 2.399067e-6 6.483965e-8
38 8019639 hsa-miR-768-3p link to infopage 0.574787 1.435801e-10 2.487812e-6 6.546875e-8
39 8019639 8023672 NM_004869 VPS4B link to infopage -0.573651 1.590233e-10 2.755396e-6 7.065118e-8
40 8019639 7956670 NM_006313 USP15 link to infopage -0.573229 1.651501e-10 2.861556e-6 7.153890e-8
41 8019639 7976322 NM_001275 CHGA link to infopage 0.572542 1.756259e-10 3.043070e-6 7.422123e-8
42 8019639 7978776 NM_018353 C14orf106 link to infopage -0.572272 1.799120e-10 3.117334e-6 7.422225e-8
43 8019639 8140967 NM_017654 SAMD9 link to infopage -0.571704 1.892536e-10 3.279197e-6 7.626040e-8
44 8019639 8071516 NM_004327 BCR link to infopage 0.571573 1.914869e-10 3.317894e-6 7.540668e-8
45 8019639 8090277 NM_022776 OSBPL11 link to infopage -0.571145 1.989260e-10 3.446790e-6 7.659534e-8
46 8019639 7925201 NM_016374 ARID4B link to infopage -0.570532 2.100539e-10 3.639605e-6 7.912184e-8
47 8019639 8055672 NM_015702 MMADHC link to infopage -0.570420 2.121552e-10 3.676013e-6 7.821305e-8
48 8019639 7957177 NM_014999 RAB21 link to infopage -0.569723 2.256710e-10 3.910201e-6 8.146252e-8
49 8019639 7918157 NM_006113 VAV3 link to infopage -0.569412 2.319678e-10 4.019306e-6 8.202665e-8
50 8019639 7957277 NM_015336 ZDHHC17 link to infopage -0.569140 2.376136e-10 4.117131e-6 8.234262e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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