[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
User requested variable id 9483.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
9483	8110606	NM_024850	BTNL8		butyrophilin-like 8

Fetching correlation data, please wait...
Getting list of correlations for id 9483.
Getting list of p-values for id 9483.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.124 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8110606	8116537	NM_024850	BTNL8	0.986187	2.970992e-82	5.147838e-78	5.147838e-78
2	8110606	8103975	NR_003542	SLED1	0.734089	5.144134e-19	8.913242e-15	4.456621e-15
3	8110606	7940191	NM_004177	STX3	0.710780	2.002214e-17	3.469236e-13	1.156412e-13
4	8110606	8064766	NM_001134338	RNF24	0.700356	9.182305e-17	1.591018e-12	3.977545e-13
5	8110606	8052872	NM_003236	TGFA	0.695383	1.856042e-16	3.215963e-12	6.431927e-13
6	8110606	8149264	NM_024607	PPP1R3B	0.693210	2.512702e-16	4.353759e-12	7.256266e-13
7	8110606	7940582	NM_004183	BEST1	0.691849	3.033806e-16	5.256675e-12	7.509536e-13
8	8110606	7996100	NM_170776	GPR97	0.691432	3.213448e-16	5.567942e-12	6.959928e-13
9	8110606	8064464	NM_178460	SIRPD	0.684040	8.770032e-16	1.519583e-11	1.688426e-12
10	8110606	7953943	NM_031412	GABARAPL1	0.671790	4.345044e-15	7.528658e-11	7.528658e-12
11	8110606	8115490	NM_033274	ADAM19	0.670713	4.983733e-15	8.635314e-11	7.850286e-12
12	8110606	7946559	NM_001017998	GNG10	0.670514	5.111389e-15	8.856504e-11	7.380420e-12
13	8110606	8166243	NM_004726	REPS2	0.670211	5.311674e-15	9.203537e-11	7.079644e-12
14	8110606	8104492	NM_031916	ROPN1L	0.670137	5.361428e-15	9.289747e-11	6.635533e-12
15	8110606	8037045	NM_001817	CEACAM4	0.668524	6.573219e-15	1.138942e-10	7.592944e-12
16	8110606	8095986	NM_005139	ANXA3	0.662738	1.351186e-14	2.341199e-10	1.463250e-11
17	8110606	8048283	NM_000578	SLC11A1	0.662007	1.478315e-14	2.561476e-10	1.506751e-11
18	8110606	8039096	NM_144687	NLRP12	0.660334	1.814413e-14	3.143833e-10	1.746574e-11
19	8110606	8092691	NM_001706	BCL6	0.660125	1.861317e-14	3.225104e-10	1.697423e-11
20	8110606	8042637	NM_001130978	DYSF	0.655273	3.345771e-14	5.797217e-10	2.898608e-11
21	8110606	8029107	NM_001815	CEACAM3	0.654719	3.574690e-14	6.193865e-10	2.949459e-11
22	8110606	8072461	NM_016733	LIMK2	0.652950	4.413127e-14	7.646625e-10	3.475738e-11
23	8110606	7926037	NM_004566	PFKFB3	0.647262	8.607885e-14	1.491488e-9	6.484732e-11
24	8110606	8103951	NM_001995	ACSL1	0.645278	1.083072e-13	1.876638e-9	7.819327e-11
25	8110606	8043981	NM_004633	IL1R2	0.643732	1.293893e-13	2.241928e-9	8.967711e-11
26	8110606	7999468	NR_024320	LITAF	0.641409	1.686991e-13	2.923049e-9	1.124250e-10
27	8110606	7983910	NM_020980	AQP9	0.639406	2.116885e-13	3.667927e-9	1.358492e-10
28	8110606	8029914	NM_018485	GPR77	0.639253	2.153919e-13	3.732095e-9	1.332891e-10
29	8110606	8029907	NM_001736	C5AR1	0.639040	2.206108e-13	3.822523e-9	1.318111e-10
30	8110606	7932796	NM_021738	SVIL	0.636363	2.979018e-13	5.161744e-9	1.720581e-10
31	8110606	8104601	NM_006317	BASP1	0.635525	3.270861e-13	5.667422e-9	1.828201e-10
32	8110606	7989596	NM_014326	DAPK2	0.633594	4.052088e-13	7.021052e-9	2.194079e-10
33	8110606	8018761	NM_006456	ST6GALNAC2	0.631059	5.355961e-13	9.280274e-9	2.812204e-10
34	8110606	8086961	NM_004567	PFKFB4	0.630882	5.460380e-13	9.461201e-9	2.782706e-10
35	8110606	8101511	NM_014991	WDFY3	0.630158	5.910158e-13	1.024053e-8	2.925866e-10
36	8110606	7918552	NM_019099	C1orf183	0.629712	6.204972e-13	1.075135e-8	2.986487e-10
37	8110606	8151756	NM_018710	TMEM55A	0.628735	6.900563e-13	1.195660e-8	3.231515e-10
38	8110606	8180144	NM_004761	RGL2	0.627894	7.560190e-13	1.309954e-8	3.447248e-10
39	8110606	8178955	NM_004761	RGL2	0.627894	7.560190e-13	1.309954e-8	3.358857e-10
40	8110606	8016847	NM_005082	TRIM25	0.627852	7.594165e-13	1.315841e-8	3.289602e-10
41	8110606	8123181	NM_000876	IGF2R	0.627010	8.318480e-13	1.441343e-8	3.515471e-10
42	8110606	8043993	AY358263	LOC100131131	0.626867	8.447673e-13	1.463728e-8	3.485067e-10
43	8110606	8143367	NM_207113	SLC37A3	0.625000	1.032514e-12	1.789038e-8	4.160553e-10
44	8110606	7965156	NM_004664	LIN7A	0.624703	1.065909e-12	1.846901e-8	4.197503e-10
45	8110606	7965606	NM_002108	HAL	0.624589	1.078977e-12	1.869543e-8	4.154539e-10
46	8110606	8148476	NM_014957	DENND3	0.623346	1.232172e-12	2.134985e-8	4.641272e-10
47	8110606	7927215	NM_000698	ALOX5	0.623337	1.233330e-12	2.136991e-8	4.546788e-10
48	8110606	8136662	NM_004668	MGAM	0.623050	1.271611e-12	2.203320e-8	4.590250e-10
49	8110606	8072744	NM_013416	NCF4	0.622858	1.297882e-12	2.248840e-8	4.589469e-10
50	8110606	8031374	NM_002000	FCAR	0.622789	1.307384e-12	2.265304e-8	4.530607e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
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