[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
7109	7925531	NM_181690	AKT3		v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)

Fetching correlation data, please wait...
Getting list of correlations for id 7109.
Getting list of p-values for id 7109.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.112 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7925531	8103106	NM_006726	LRBA	0.870785	1.567275e-33	2.715617e-29	2.715617e-29
2	7925531	8154531	NM_017925	DENND4C	0.857465	1.722401e-31	2.984404e-27	1.492202e-27
3	7925531	8113157	NM_014639	TTC37	0.856103	2.710990e-31	4.697332e-27	1.565777e-27
4	7925531	7989128	NM_144571	CNOT6L	0.851754	1.118767e-30	1.938487e-26	4.846217e-27
5	7925531	7903239	NM_000028	AGL	0.850488	1.675846e-30	2.903739e-26	5.807478e-27
6	7925531	8027416	NM_003796	C19orf2	0.849667	2.174087e-30	3.767041e-26	6.278402e-27
7	7925531	8177560	NM_018429	BDP1	0.847873	3.816975e-30	6.613673e-26	9.448105e-27
8	7925531	8051882	NM_133259	LRPPRC	0.847835	3.863377e-30	6.694074e-26	8.367592e-27
9	7925531	8105778	NM_181523	PIK3R1	0.847743	3.975273e-30	6.887955e-26	7.653283e-27
10	7925531	8106025	NM_018429	BDP1	0.846431	5.970582e-30	1.034523e-25	1.034523e-26
11	7925531	7916562	NM_002136	HNRNPA1	0.843226	1.587508e-29	2.750676e-25	2.500614e-26
12	7925531	8070341	NM_033656	BRWD1	0.840858	3.224821e-29	5.587648e-25	4.656373e-26
13	7925531	7990092	NM_006901	MYO9A	0.840807	3.274316e-29	5.673407e-25	4.364159e-26
14	7925531	8053801	NM_025190	ANKRD36B	0.838172	7.105424e-29	1.231157e-24	8.793977e-26
15	7925531	7988713	NM_017672	TRPM7	0.837410	8.866554e-29	1.536308e-24	1.024205e-25
16	7925531	7969881	NM_003291	TPP2	0.836526	1.144806e-28	1.983605e-24	1.239753e-25
17	7925531	7916443	NM_015306	USP24	0.836475	1.161540e-28	2.012601e-24	1.183883e-25
18	7925531	7953878	NM_001004419	CLEC2D	0.835621	1.484661e-28	2.572472e-24	1.429151e-25
19	7925531	8147483	NM_178812	MTDH	0.834837	1.856995e-28	3.217615e-24	1.693482e-25
20	7925531	7930380	NM_016824	ADD3	0.834284	2.173613e-28	3.766218e-24	1.883109e-25
21	7925531	8019807	NM_005151	USP14	0.833861	2.450724e-28	4.246369e-24	2.022081e-25
22	7925531	7915882	NM_014774	KIAA0494	0.833626	2.618994e-28	4.537930e-24	2.062696e-25
23	7925531	8136401	NM_015135	NUP205	0.833230	2.928868e-28	5.074850e-24	2.206457e-25
24	7925531	8117140	NM_017774	CDKAL1	0.833228	2.930144e-28	5.077060e-24	2.115442e-25
25	7925531	7972003	NM_007249	KLF12	0.833209	2.945556e-28	5.103765e-24	2.041506e-25
26	7925531	8043697	NM_025190	ANKRD36B	0.832151	3.965646e-28	6.871275e-24	2.642798e-25
27	7925531	8093191	NM_001098424	DLG1	0.831322	4.996898e-28	8.658125e-24	3.206713e-25
28	7925531	8107375	NM_022828	YTHDC2	0.830501	6.277105e-28	1.087634e-23	3.884407e-25
29	7925531	7902594	NM_182948	PRKACB	0.830286	6.660758e-28	1.154110e-23	3.979688e-25
30	7925531	8147156	NM_007013	WWP1	0.829494	8.288357e-28	1.436124e-23	4.787079e-25
31	7925531	8073799	NM_013236	ATXN10	0.828770	1.010825e-27	1.751456e-23	5.649858e-25
32	7925531	8023561	NM_005570	LMAN1	0.827337	1.493960e-27	2.588584e-23	8.089325e-25
33	7925531	7938313	NM_006391	IPO7	0.826727	1.762105e-27	3.053199e-23	9.252119e-25
34	7925531	8128956	NM_002037	FYN	0.826370	1.940196e-27	3.361778e-23	9.887584e-25
35	7925531	8081564	NM_198196	CD96	0.825584	2.397090e-27	4.153438e-23	1.186697e-24
36	7925531	8129193	NM_001042475	C6orf204	0.825286	2.596426e-27	4.498828e-23	1.249674e-24
37	7925531	8145136	NM_005605	PPP3CC	0.824854	2.913880e-27	5.048881e-23	1.364562e-24
38	7925531	8000192	ENST00000198767		0.824600	3.118819e-27	5.403977e-23	1.422099e-24
39	7925531	7931081	NM_021622	PLEKHA1	0.823482	4.196459e-27	7.271204e-23	1.864411e-24
40	7925531	8054135	NM_012214	MGAT4A	0.822858	4.949692e-27	8.576331e-23	2.144083e-24
41	7925531	8059689	NM_005381	NCL	0.822207	5.873197e-27	1.017649e-22	2.482070e-24
42	7925531	8083092	NM_001080412	ZBTB38	0.821984	6.227709e-27	1.079075e-22	2.569227e-24
43	7925531	7926609	NM_005180	BMI1	0.821916	6.338978e-27	1.098355e-22	2.554313e-24
44	7925531	8140037	NM_032408	BAZ1B	0.821774	6.580795e-27	1.140254e-22	2.591487e-24
45	7925531	7982957	NM_001080541	MGA	0.821154	7.736622e-27	1.340524e-22	2.978943e-24
46	7925531	7924351	NM_004446	EPRS	0.820867	8.338924e-27	1.444885e-22	3.141055e-24
47	7925531	8020630	NM_153211	TTC39C	0.820744	8.609312e-27	1.491735e-22	3.173905e-24
48	7925531	8114861	NM_020117	LARS	0.820377	9.472442e-27	1.641290e-22	3.419354e-24
49	7925531	8134180	NM_019004	ANKIB1	0.820314	9.628420e-27	1.668316e-22	3.404727e-24
50	7925531	8107066	NM_005575	LNPEP	0.820036	1.034755e-26	1.792920e-22	3.585841e-24

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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