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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
4702 8018236 NM_024417 FDXR link to infopage ferredoxin reductase

Fetching correlation data, please wait...
Getting list of correlations for id 4702.
Getting list of p-values for id 4702.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.160 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8018236 8021199 NM_002747 MAPK4 link to infopage 0.815087 3.657610e-26 6.337541e-22 6.337541e-22
2 8018236 7945536 NM_016564 CEND1 link to infopage 0.798211 2.072604e-24 3.591200e-20 1.795600e-20
3 8018236 8075118 NM_001887 CRYBB1 link to infopage 0.794736 4.539666e-24 7.865879e-20 2.621960e-20
4 8018236 8060094 NM_148961 OTOS link to infopage 0.793704 5.713132e-24 9.899143e-20 2.474786e-20
5 8018236 7949344 NM_005468 NAALADL1 link to infopage 0.792275 7.837469e-24 1.357998e-19 2.715996e-20
6 8018236 7977216 NM_015656 KIF26A link to infopage 0.789318 1.496166e-23 2.592407e-19 4.320678e-20
7 8018236 7996448 NM_003946 NOL3 link to infopage 0.781613 7.690038e-23 1.332453e-18 1.903504e-19
8 8018236 8098512 NM_021942 C4orf41 link to infopage -0.775332 2.783420e-22 4.822832e-18 6.028539e-19
9 8018236 8032312 NM_138813 ATP8B3 link to infopage 0.773110 4.343471e-22 7.525933e-18 8.362147e-19
10 8018236 8070482 NR_027272 C21orf129 link to infopage 0.772047 5.365035e-22 9.295995e-18 9.295995e-19
11 8018236 8007259 ENST00000225928 link to infopage 0.771133 6.427060e-22 1.113617e-17 1.012379e-18
12 8018236 7976669 NM_001127258 HHIPL1 link to infopage 0.770710 6.985905e-22 1.210448e-17 1.008707e-18
13 8018236 7960894 NR_024420 LOC389634 link to infopage 0.769743 8.446030e-22 1.463444e-17 1.125726e-18
14 8018236 8038109 NM_017708 FAM83E link to infopage 0.768702 1.035098e-21 1.793515e-17 1.281082e-18
15 8018236 7991939 NM_145294 WDR90 link to infopage 0.766637 1.544347e-21 2.675889e-17 1.783926e-18
16 8018236 7945688 NR_003512 INS-IGF2 link to infopage 0.766112 1.708734e-21 2.960723e-17 1.850452e-18
17 8018236 7919582 XR_039086 LOC100133075 link to infopage 0.763924 2.596498e-21 4.498952e-17 2.646442e-18
18 8018236 7966690 NM_016569 TBX3 link to infopage 0.761962 3.764390e-21 6.522558e-17 3.623643e-18
19 8018236 7937498 NM_173584 EFCAB4A link to infopage 0.758545 7.127677e-21 1.235013e-16 6.500066e-18
20 8018236 8076747 AK123383 LOC642648 link to infopage 0.758097 7.744296e-21 1.341854e-16 6.709271e-18
21 8018236 8136080 NM_005631 SMO link to infopage 0.758044 7.819491e-21 1.354883e-16 6.451825e-18
22 8018236 7992302 NM_020825 CRAMP1L link to infopage 0.757681 8.362872e-21 1.449035e-16 6.586522e-18
23 8018236 8032699 NM_015174 ZFR2 link to infopage 0.757258 9.040336e-21 1.566419e-16 6.810517e-18
24 8018236 7935983 NM_005029 PITX3 link to infopage 0.756730 9.961703e-21 1.726064e-16 7.191934e-18
25 8018236 7937560 NM_002457 MUC2 link to infopage 0.756466 1.045774e-20 1.812013e-16 7.248053e-18
26 8018236 8069037 NM_000383 AIRE link to infopage 0.756174 1.103281e-20 1.911654e-16 7.352516e-18
27 8018236 8032051 NM_182577 ODF3L2 link to infopage 0.755955 1.148244e-20 1.989563e-16 7.368751e-18
28 8018236 8159670 NM_006647 NOXA1 link to infopage 0.755673 1.209123e-20 2.095047e-16 7.482312e-18
29 8018236 8112121 NM_173514 SLC38A9 link to infopage -0.754935 1.383362e-20 2.396952e-16 8.265351e-18
30 8018236 7914361 NM_001856 COL16A1 link to infopage 0.753456 1.809020e-20 3.134489e-16 1.044830e-17
31 8018236 8065327 NM_033176 NKX2-4 link to infopage 0.753195 1.896495e-20 3.286057e-16 1.060019e-17
32 8018236 8026735 NM_133644 GTPBP3 link to infopage 0.752949 1.982475e-20 3.435035e-16 1.073449e-17
33 8018236 7911435 NM_001014980 FAM132A link to infopage 0.751907 2.391542e-20 4.143825e-16 1.255705e-17
34 8018236 7933310 ENST00000319426 link to infopage 0.751868 2.407967e-20 4.172284e-16 1.227142e-17
35 8018236 8027213 NM_198537 YJEFN3 link to infopage 0.751755 2.457605e-20 4.258292e-16 1.216655e-17
36 8018236 7995340 link to infopage 0.751233 2.698427e-20 4.675565e-16 1.298768e-17
37 8018236 8031441 NM_032430 BRSK1 link to infopage 0.751014 2.806030e-20 4.862009e-16 1.314056e-17
38 8018236 8153101 NM_152888 COL22A1 link to infopage 0.750259 3.210830e-20 5.563404e-16 1.464054e-17
39 8018236 7935528 NM_003015 SFRP5 link to infopage 0.750186 3.252798e-20 5.636123e-16 1.445160e-17
40 8018236 7918955 NM_001135589 GDAP2 link to infopage -0.749470 3.693856e-20 6.400343e-16 1.600086e-17
41 8018236 8125383 NM_004557 NOTCH4 link to infopage 0.749085 3.954816e-20 6.852510e-16 1.671344e-17
42 8018236 8118804 NM_020804 PACSIN1 link to infopage 0.748531 4.362252e-20 7.558473e-16 1.799637e-17
43 8018236 8147172 NM_003909 CPNE3 link to infopage -0.748076 4.726719e-20 8.189986e-16 1.904648e-17
44 8018236 8049942 NM_080741 NEU4 link to infopage 0.747644 5.100484e-20 8.837609e-16 2.008548e-17
45 8018236 8137228 NM_173680 ZNF775 link to infopage 0.747485 5.244800e-20 9.087665e-16 2.019481e-17
46 8018236 7913226 NM_012400 PLA2G2D link to infopage 0.747424 5.301505e-20 9.185918e-16 1.996939e-17
47 8018236 7952011 NM_004588 SCN2B link to infopage 0.747407 5.317294e-20 9.213275e-16 1.960271e-17
48 8018236 7931571 NM_145202 PRAP1 link to infopage 0.747235 5.480621e-20 9.496272e-16 1.978390e-17
49 8018236 7912031 NM_019089 HES2 link to infopage 0.747014 5.696635e-20 9.870559e-16 2.014400e-17
50 8018236 8064108 BC000912 C20orf195 link to infopage 0.746036 6.760849e-20 1.171452e-15 2.342905e-17

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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