[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
7365 8033064 NM_002034 FUT5 link to infopage fucosyltransferase 5 (alpha (1,3) fucosyltransferase)

Fetching correlation data, please wait...
Getting list of correlations for id 7365.
Getting list of p-values for id 7365.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.141 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8033064 7959402 NM_030765 B3GNT4 link to infopage 0.717489 7.247154e-18 1.255714e-13 1.255714e-13
2 8033064 8159036 NM_139025 ADAMTS13 link to infopage 0.713026 1.429602e-17 2.477072e-13 1.238536e-13
3 8033064 8115691 NM_003062 SLIT3 link to infopage 0.712448 1.559525e-17 2.702188e-13 9.007294e-14
4 8033064 8131096 NM_001128636 ELFN1 link to infopage 0.707812 3.110408e-17 5.389404e-13 1.347351e-13
5 8033064 7949843 NM_016366 CABP2 link to infopage 0.705801 4.178731e-17 7.240487e-13 1.448097e-13
6 8033064 7992758 NM_172229 KREMEN2 link to infopage 0.704686 4.917187e-17 8.520009e-13 1.420002e-13
7 8033064 7995340 link to infopage 0.703731 5.648341e-17 9.786881e-13 1.398126e-13
8 8033064 8032770 NM_016539 SIRT6 link to infopage 0.701183 8.156350e-17 1.413251e-12 1.766563e-13
9 8033064 8131056 NM_017781 CYP2W1 link to infopage 0.698752 1.154048e-16 1.999619e-12 2.221799e-13
10 8033064 7977418 NM_001134875 C14orf80 link to infopage 0.698440 1.206292e-16 2.090142e-12 2.090142e-13
11 8033064 8089714 NM_002338 LSAMP link to infopage 0.697560 1.366301e-16 2.367389e-12 2.152172e-13
12 8033064 8034151 NM_020812 DOCK6 link to infopage 0.695354 1.863450e-16 3.228800e-12 2.690667e-13
13 8033064 8031499 AF086519 SSC5D link to infopage 0.693694 2.349239e-16 4.070527e-12 3.131174e-13
14 8033064 8086985 NM_000094 COL7A1 link to infopage 0.690871 3.471897e-16 6.015755e-12 4.296968e-13
15 8033064 8028407 NM_000540 RYR1 link to infopage 0.690790 3.510751e-16 6.083079e-12 4.055386e-13
16 8033064 8027556 NM_002333 LRP3 link to infopage 0.688044 5.110292e-16 8.854602e-12 5.534127e-13
17 8033064 7911114 NM_018012 KIF26B link to infopage 0.687429 5.555574e-16 9.626144e-12 5.662437e-13
18 8033064 7995088 NM_001008274 TRIM72 link to infopage 0.686844 6.013516e-16 1.041962e-11 5.788677e-13
19 8033064 8035408 NM_000923 PDE4C link to infopage 0.686705 6.127613e-16 1.061732e-11 5.588061e-13
20 8033064 8026861 NM_014256 B3GNT3 link to infopage 0.684832 7.887044e-16 1.366588e-11 6.832941e-13
21 8033064 8007259 ENST00000225928 link to infopage 0.683752 9.115068e-16 1.579368e-11 7.520799e-13
22 8033064 7994260 NM_006040 HS3ST4 link to infopage 0.682758 1.040670e-15 1.803168e-11 8.196220e-13
23 8033064 7929932 NM_030929 KAZALD1 link to infopage 0.681012 1.311937e-15 2.273193e-11 9.883448e-13
24 8033064 8087145 NM_001407 CELSR3 link to infopage 0.680271 1.446921e-15 2.507079e-11 1.044616e-12
25 8033064 7896761 NM_152486 SAMD11 link to infopage 0.676974 2.228313e-15 3.860998e-11 1.544399e-12
26 8033064 8137133 NM_032534 KRBA1 link to infopage 0.676813 2.275590e-15 3.942914e-11 1.516505e-12
27 8033064 7937228 NM_001012508 SPRN link to infopage 0.676102 2.495512e-15 4.323974e-11 1.601472e-12
28 8033064 8043114 NM_031283 TCF7L1 link to infopage 0.673073 3.688000e-15 6.390198e-11 2.282213e-12
29 8033064 7911435 NM_001014980 FAM132A link to infopage 0.672952 3.745451e-15 6.489742e-11 2.237842e-12
30 8033064 8005328 NM_016239 MYO15A link to infopage 0.672236 4.104851e-15 7.112476e-11 2.370825e-12
31 8033064 7897860 NM_001243 TNFRSF8 link to infopage 0.671364 4.587523e-15 7.948801e-11 2.564129e-12
32 8033064 8064242 NR_027686 NCRNA00176 link to infopage 0.671250 4.654621e-15 8.065061e-11 2.520332e-12
33 8033064 7962703 NM_001844 COL2A1 link to infopage 0.670790 4.935020e-15 8.550909e-11 2.591185e-12
34 8033064 7985418 ENST00000342039 link to infopage 0.670540 5.094430e-15 8.827119e-11 2.596211e-12
35 8033064 7985459 ENST00000342039 link to infopage 0.670540 5.094430e-15 8.827119e-11 2.522034e-12
36 8033064 7990928 ENST00000342039 link to infopage 0.670540 5.094430e-15 8.827119e-11 2.451977e-12
37 8033064 7921773 NM_030916 PVRL4 link to infopage 0.669978 5.470768e-15 9.479200e-11 2.561946e-12
38 8033064 7967641 NM_133448 TMEM132D link to infopage 0.669823 5.578928e-15 9.666609e-11 2.543844e-12
39 8033064 7939158 NM_001076786 QSER1 link to infopage -0.669803 5.593209e-15 9.691353e-11 2.484962e-12
40 8033064 8038109 NM_017708 FAM83E link to infopage 0.668584 6.524024e-15 1.130418e-10 2.826044e-12
41 8033064 7935983 NM_005029 PITX3 link to infopage 0.668490 6.601644e-15 1.143867e-10 2.789919e-12
42 8033064 7938090 NM_176875 CCKBR link to infopage 0.667097 7.863595e-15 1.362525e-10 3.244107e-12
43 8033064 7897416 NM_001080397 SLC45A1 link to infopage 0.666716 8.247259e-15 1.429003e-10 3.323262e-12
44 8033064 8076497 NM_017436 A4GALT link to infopage 0.665935 9.092445e-15 1.575448e-10 3.580564e-12
45 8033064 8010237 ENST00000340363 link to infopage 0.665546 9.543650e-15 1.653628e-10 3.674729e-12
46 8033064 7952893 BC024764 IQSEC3 link to infopage 0.665418 9.696686e-15 1.680145e-10 3.652489e-12
47 8033064 8159670 NM_006647 NOXA1 link to infopage 0.665386 9.736257e-15 1.687001e-10 3.589364e-12
48 8033064 7973709 NM_004554 NFATC4 link to infopage 0.665368 9.757634e-15 1.690705e-10 3.522302e-12
49 8033064 8006321 hsa-mir-193a link to infopage 0.665221 9.937801e-15 1.721923e-10 3.514128e-12
50 8033064 8037651 NM_175875 SIX5 link to infopage 0.664932 1.030115e-14 1.784880e-10 3.569760e-12

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!