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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
5248 8015681 NM_016602 CCR10 link to infopage chemokine (C-C motif) receptor 10

Fetching correlation data, please wait...
Getting list of correlations for id 5248.
Getting list of p-values for id 5248.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.112 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8015681 7960512 link to infopage 0.702164 7.083900e-17 1.227427e-12 1.227427e-12
2 8015681 7995336 link to infopage 0.671450 4.537699e-15 7.862471e-11 3.931235e-11
3 8015681 8157383 NM_032888 COL27A1 link to infopage 0.669367 5.910423e-15 1.024099e-10 3.413663e-11
4 8015681 8040290 ENST00000364740 link to infopage 0.666326 8.659343e-15 1.500404e-10 3.751011e-11
5 8015681 7995322 link to infopage 0.661494 1.574456e-14 2.728060e-10 5.456121e-11
6 8015681 7959249 ENST00000365075 link to infopage 0.660768 1.720885e-14 2.981778e-10 4.969630e-11
7 8015681 7976844 hsa-mir-134 link to infopage 0.658952 2.147024e-14 3.720149e-10 5.314498e-11
8 8015681 7932860 link to infopage 0.654595 3.628179e-14 6.286546e-10 7.858183e-11
9 8015681 8064188 AK000832 link to infopage 0.651096 5.495521e-14 9.522089e-10 1.058010e-10
10 8015681 7963410 NM_173086 KRT6C link to infopage 0.650705 5.754285e-14 9.970450e-10 9.970450e-11
11 8015681 8085370 NR_003112 GSTM5P1 link to infopage 0.639364 2.126957e-13 3.685378e-9 3.350343e-10
12 8015681 7899101 NM_006314 CNKSR1 link to infopage 0.639037 2.206962e-13 3.824003e-9 3.186669e-10
13 8015681 8030582 NM_001145809 MYH14 link to infopage 0.633988 3.879549e-13 6.722095e-9 5.170842e-10
14 8015681 7917737 ENST00000410931 link to infopage 0.632942 4.354787e-13 7.545539e-9 5.389671e-10
15 8015681 8071168 NR_024593 POM121L10P link to infopage 0.628587 7.012611e-13 1.215075e-8 8.100500e-10
16 8015681 7976724 ENST00000362966 link to infopage 0.627123 8.217192e-13 1.423793e-8 8.898706e-10
17 8015681 7995342 link to infopage 0.622824 1.302553e-12 2.256934e-8 1.327608e-9
18 8015681 8034744 NM_001145028 PALM3 link to infopage 0.621471 1.503630e-12 2.605340e-8 1.447411e-9
19 8015681 8007259 ENST00000225928 link to infopage 0.620880 1.600561e-12 2.773291e-8 1.459627e-9
20 8015681 8019010 NM_020649 CBX8 link to infopage 0.620740 1.624300e-12 2.814425e-8 1.407212e-9
21 8015681 7981872 ENST00000459232 link to infopage 0.620524 1.661815e-12 2.879426e-8 1.371155e-9
22 8015681 8067506 BC137326 C20orf151 link to infopage 0.618994 1.952062e-12 3.382338e-8 1.537426e-9
23 8015681 8107644 ENST00000410133 link to infopage 0.617908 2.186924e-12 3.789283e-8 1.647515e-9
24 8015681 7995352 link to infopage 0.617288 2.333204e-12 4.042743e-8 1.684476e-9
25 8015681 8065603 NR_002781 TSPYL3 link to infopage 0.617115 2.375692e-12 4.116361e-8 1.646544e-9
26 8015681 7945652 NM_001012708 KRTAP5-3 link to infopage 0.616958 2.414820e-12 4.184159e-8 1.609292e-9
27 8015681 8035551 BC004943 MGC10814 link to infopage 0.616660 2.490939e-12 4.316051e-8 1.598537e-9
28 8015681 7995348 link to infopage 0.616466 2.541630e-12 4.403882e-8 1.572815e-9
29 8015681 7932862 ENST00000410143 link to infopage 0.616289 2.588939e-12 4.485855e-8 1.546846e-9
30 8015681 8034700 BC119719 C19orf57 link to infopage 0.615884 2.699967e-12 4.678233e-8 1.559411e-9
31 8015681 7945536 NM_016564 CEND1 link to infopage 0.614925 2.982092e-12 5.167071e-8 1.666797e-9
32 8015681 7982267 ENST00000459113 link to infopage 0.614150 3.230609e-12 5.597677e-8 1.749274e-9
33 8015681 7991898 ENST00000409527 link to infopage 0.612626 3.778660e-12 6.547285e-8 1.984026e-9
34 8015681 7995330 link to infopage 0.612239 3.931746e-12 6.812536e-8 2.003687e-9
35 8015681 8073623 NM_001044370 MPPED1 link to infopage 0.609752 5.066390e-12 8.778533e-8 2.508152e-9
36 8015681 7995326 link to infopage 0.609451 5.223855e-12 9.051374e-8 2.514271e-9
37 8015681 8168578 NR_024062 UBE2DNL link to infopage 0.609189 5.364498e-12 9.295066e-8 2.512180e-9
38 8015681 7902036 link to infopage 0.608643 5.669293e-12 9.823185e-8 2.585049e-9
39 8015681 7995324 link to infopage 0.607863 6.133801e-12 1.062804e-7 2.725138e-9
40 8015681 8079305 NM_003278 CLEC3B link to infopage 0.607850 6.142200e-12 1.064259e-7 2.660647e-9
41 8015681 8083523 NM_003875 GMPS link to infopage -0.607487 6.370603e-12 1.103834e-7 2.692279e-9
42 8015681 7995332 link to infopage 0.607078 6.638553e-12 1.150262e-7 2.738719e-9
43 8015681 7985571 NR_026811 LOC80154 link to infopage 0.605522 7.759918e-12 1.344561e-7 3.126886e-9
44 8015681 7904927 NM_005267 GJA8 link to infopage 0.604435 8.649649e-12 1.498725e-7 3.406193e-9
45 8015681 8166899 NM_022567 NYX link to infopage 0.604021 9.014439e-12 1.561932e-7 3.470960e-9
46 8015681 7982282 ENST00000410778 link to infopage 0.602640 1.033846e-11 1.791345e-7 3.894228e-9
47 8015681 7982307 ENST00000410778 link to infopage 0.602640 1.033846e-11 1.791345e-7 3.811372e-9
48 8015681 7901299 NM_016308 CMPK1 link to infopage -0.602256 1.073943e-11 1.860821e-7 3.876710e-9
49 8015681 7976848 hsa-mir-453 link to infopage 0.600078 1.331092e-11 2.306383e-7 4.706905e-9
50 8015681 8070081 ENST00000384370 link to infopage 0.599049 1.472210e-11 2.550899e-7 5.101798e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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