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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
2835 7963375 NM_033045 KRT84 link to infopage keratin 84

Fetching correlation data, please wait...
Getting list of correlations for id 2835.
Getting list of p-values for id 2835.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.120 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7963375 7915385 NM_001956 EDN2 link to infopage 0.760165 5.273765e-21 9.137853e-17 9.137853e-17
2 7963375 8131056 NM_017781 CYP2W1 link to infopage 0.747987 4.801543e-20 8.319634e-16 4.159817e-16
3 7963375 8159036 NM_139025 ADAMTS13 link to infopage 0.747377 5.345518e-20 9.262179e-16 3.087393e-16
4 7963375 8125805 NM_000841 GRM4 link to infopage 0.745781 7.068225e-20 1.224711e-15 3.061778e-16
5 7963375 7937560 NM_002457 MUC2 link to infopage 0.738175 2.602143e-19 4.508733e-15 9.017466e-16
6 7963375 8010113 NM_144677 MGAT5B link to infopage 0.737032 3.152760e-19 5.462787e-15 9.104646e-16
7 7963375 8114550 NM_004883 NRG2 link to infopage 0.735731 3.917871e-19 6.788496e-15 9.697851e-16
8 7963375 7913450 NM_005529 HSPG2 link to infopage 0.734426 4.865734e-19 8.430857e-15 1.053857e-15
9 7963375 7936882 NM_001146340 NKX1-2 link to infopage 0.733530 5.642065e-19 9.776006e-15 1.086223e-15
10 7963375 8016646 NM_000088 COL1A1 link to infopage 0.729580 1.075890e-18 1.864194e-14 1.864194e-15
11 7963375 8005328 NM_016239 MYO15A link to infopage 0.727525 1.498578e-18 2.596586e-14 2.360533e-15
12 7963375 7908812 NM_004767 GPR37L1 link to infopage 0.725436 2.092303e-18 3.625333e-14 3.021111e-15
13 7963375 7929932 NM_030929 KAZALD1 link to infopage 0.724872 2.288500e-18 3.965283e-14 3.050218e-15
14 7963375 8036151 NM_144617 HSPB6 link to infopage 0.722885 3.132431e-18 5.427564e-14 3.876831e-15
15 7963375 7914260 NM_002379 MATN1 link to infopage 0.721275 4.031684e-18 6.985699e-14 4.657133e-15
16 7963375 8054740 NM_003466 PAX8 link to infopage 0.721211 4.072176e-18 7.055859e-14 4.409912e-15
17 7963375 8037513 NM_138568 EXOC3L2 link to infopage 0.720528 4.529795e-18 7.848777e-14 4.616927e-15
18 7963375 7953150 NM_003213 TEAD4 link to infopage 0.720521 4.534752e-18 7.857365e-14 4.365203e-15
19 7963375 7914667 NM_052896 CSMD2 link to infopage 0.719839 5.041430e-18 8.735286e-14 4.597519e-15
20 7963375 8060134 NM_004321 KIF1A link to infopage 0.719686 5.162952e-18 8.945847e-14 4.472924e-15
21 7963375 8025450 NM_001004699 OR2Z1 link to infopage 0.719413 5.386115e-18 9.332521e-14 4.444058e-15
22 7963375 8018379 NM_020753 CASKIN2 link to infopage 0.719331 5.454603e-18 9.451190e-14 4.295995e-15
23 7963375 8021199 NM_002747 MAPK4 link to infopage 0.718205 6.491745e-18 1.124825e-13 4.890542e-15
24 7963375 8037732 NM_001029861 NANOS2 link to infopage 0.717822 6.885657e-18 1.193078e-13 4.971157e-15
25 7963375 8074063 NM_024866 ADM2 link to infopage 0.714479 1.147514e-17 1.988297e-13 7.953190e-15
26 7963375 7920027 NM_007185 CELF3 link to infopage 0.714468 1.149442e-17 1.991639e-13 7.660149e-15
27 7963375 8170825 NM_001048181 OPN1MW2 link to infopage 0.713833 1.265585e-17 2.192880e-13 8.121777e-15
28 7963375 8075200 NM_012265 RHBDD3 link to infopage 0.712302 1.594017e-17 2.761953e-13 9.864119e-15
29 7963375 8087907 NM_020163 SEMA3G link to infopage 0.711501 1.797609e-17 3.114717e-13 1.074040e-14
30 7963375 8067820 BC024764 IQSEC3 link to infopage 0.711053 1.922400e-17 3.330942e-13 1.110314e-14
31 7963375 8010237 ENST00000340363 link to infopage 0.711003 1.936703e-17 3.355725e-13 1.082492e-14
32 7963375 7937200 NM_015722 CALY link to infopage 0.709750 2.334249e-17 4.044554e-13 1.263923e-14
33 7963375 7973468 NM_138360 LRRC16B link to infopage 0.708397 2.852796e-17 4.943040e-13 1.497891e-14
34 7963375 8048551 NM_005876 SPEG link to infopage 0.707749 3.139468e-17 5.439757e-13 1.599929e-14
35 7963375 7955305 NM_001652 AQP6 link to infopage 0.706342 3.860549e-17 6.689174e-13 1.911193e-14
36 7963375 7960099 NM_170683 P2RX2 link to infopage 0.706086 4.008268e-17 6.945126e-13 1.929202e-14
37 7963375 8049942 NM_080741 NEU4 link to infopage 0.705729 4.223117e-17 7.317395e-13 1.977674e-14
38 7963375 8070786 NM_198688 KRTAP10-6 link to infopage 0.705428 4.412879e-17 7.646196e-13 2.012157e-14
39 7963375 8119435 NM_004828 NCR2 link to infopage 0.704689 4.914548e-17 8.515438e-13 2.183446e-14
40 7963375 8054020 BC038583 FAM178B link to infopage 0.704495 5.055702e-17 8.760014e-13 2.190004e-14
41 7963375 7986960 NM_015307 FAM189A1 link to infopage 0.703039 6.243311e-17 1.081778e-12 2.638484e-14
42 7963375 8036989 ENST00000412510 link to infopage 0.702324 6.922287e-17 1.199425e-12 2.855773e-14
43 7963375 8026900 NM_002248 KCNN1 link to infopage 0.702118 7.130449e-17 1.235493e-12 2.873239e-14
44 7963375 7952893 BC024764 IQSEC3 link to infopage 0.701971 7.283594e-17 1.262028e-12 2.868246e-14
45 7963375 8029458 NM_001039213 CEACAM16 link to infopage 0.701793 7.472280e-17 1.294722e-12 2.877160e-14
46 7963375 7997801 NM_013278 IL17C link to infopage 0.700441 9.070546e-17 1.571654e-12 3.416638e-14
47 7963375 8053728 NM_000798 DRD5 link to infopage 0.700359 9.178732e-17 1.590399e-12 3.383827e-14
48 7963375 8086540 NM_020208 SLC6A20 link to infopage 0.700287 9.272766e-17 1.606692e-12 3.347275e-14
49 7963375 8125843 NM_012391 SPDEF link to infopage 0.700018 9.636324e-17 1.669686e-12 3.407522e-14
50 7963375 8156783 NM_001855 COL15A1 link to infopage 0.699852 9.867167e-17 1.709684e-12 3.419368e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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