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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
10344 8037732 NM_001029861 NANOS2 link to infopage nanos homolog 2 (Drosophila)

Fetching correlation data, please wait...
Getting list of correlations for id 10344.
Getting list of p-values for id 10344.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.147 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8037732 7937560 NM_002457 MUC2 link to infopage 0.856687 2.233433e-31 3.869869e-27 3.869869e-27
2 8037732 8137330 ENST00000356058 link to infopage 0.847267 4.609395e-30 7.986699e-26 3.993350e-26
3 8037732 7897066 NR_024445 LOC100128003 link to infopage 0.844597 1.047629e-29 1.815227e-25 6.050757e-26
4 8037732 7913450 NM_005529 HSPG2 link to infopage 0.838299 6.847100e-29 1.186397e-24 2.965993e-25
5 8037732 7996027 NM_002996 CX3CL1 link to infopage 0.837604 8.382013e-29 1.452351e-24 2.904703e-25
6 8037732 8029458 NM_001039213 CEACAM16 link to infopage 0.832768 3.335540e-28 5.779490e-24 9.632483e-25
7 8037732 8125805 NM_000841 GRM4 link to infopage 0.831976 4.164427e-28 7.215703e-24 1.030815e-24
8 8037732 8003939 NM_003963 TM4SF5 link to infopage 0.829352 8.618788e-28 1.493377e-23 1.866722e-24
9 8037732 8114550 NM_004883 NRG2 link to infopage 0.829141 9.130835e-28 1.582100e-23 1.757889e-24
10 8037732 8131056 NM_017781 CYP2W1 link to infopage 0.826543 1.852060e-27 3.209064e-23 3.209064e-24
11 8037732 7919564 ENST00000365297 link to infopage 0.824061 3.599531e-27 6.236908e-23 5.669917e-24
12 8037732 7992845 NM_003456 ZNF205 link to infopage 0.823321 4.379163e-27 7.587777e-23 6.323147e-24
13 8037732 8131087 NM_001080461 UNCX link to infopage 0.823081 4.666235e-27 8.085186e-23 6.219374e-24
14 8037732 7933310 ENST00000319426 link to infopage 0.822637 5.245365e-27 9.088644e-23 6.491889e-24
15 8037732 8164562 NM_199350 C9orf50 link to infopage 0.821964 6.260242e-27 1.084712e-22 7.231414e-24
16 8037732 7997801 NM_013278 IL17C link to infopage 0.820874 8.323783e-27 1.442262e-22 9.014137e-24
17 8037732 7927307 NM_001630 ANXA8L2 link to infopage 0.820120 1.012405e-26 1.754193e-22 1.031878e-23
18 8037732 8004842 NM_173728 ARHGEF15 link to infopage 0.818697 1.461601e-26 2.532516e-22 1.406953e-23
19 8037732 8110821 NM_001044 SLC6A3 link to infopage 0.818072 1.715706e-26 2.972803e-22 1.564633e-23
20 8037732 7927367 NM_001040084 ANXA8 link to infopage 0.818044 1.727868e-26 2.993878e-22 1.496939e-23
21 8037732 8159036 NM_139025 ADAMTS13 link to infopage 0.817531 1.970223e-26 3.413806e-22 1.625622e-23
22 8037732 7972899 BX647655 DKFZp451A211 link to infopage 0.815213 3.543982e-26 6.140657e-22 2.791208e-23
23 8037732 8016646 NM_000088 COL1A1 link to infopage 0.815001 3.738332e-26 6.477408e-22 2.816264e-23
24 8037732 8037513 NM_138568 EXOC3L2 link to infopage 0.813889 4.937148e-26 8.554597e-22 3.564415e-23
25 8037732 8156783 NM_001855 COL15A1 link to infopage 0.812922 6.281101e-26 1.088326e-21 4.353306e-23
26 8037732 8049670 NM_002081 GPC1 link to infopage 0.811401 9.143283e-26 1.584257e-21 6.093295e-23
27 8037732 7927099 NR_026827 LOC84856 link to infopage 0.810822 1.054020e-25 1.826300e-21 6.764075e-23
28 8037732 8067409 NM_005560 LAMA5 link to infopage 0.810257 1.210170e-25 2.096861e-21 7.488789e-23
29 8037732 8028407 NM_000540 RYR1 link to infopage 0.809347 1.510403e-25 2.617075e-21 9.024397e-23
30 8037732 8151617 AF495523 REXO1L1 link to infopage 0.809065 1.617307e-25 2.802307e-21 9.341024e-23
31 8037732 8151613 AF495523 REXO1L1 link to infopage 0.809065 1.617307e-25 2.802307e-21 9.039701e-23
32 8037732 8151621 AF495523 REXO1L1 link to infopage 0.809065 1.617307e-25 2.802307e-21 8.757210e-23
33 8037732 8151605 AF495523 REXO1L1 link to infopage 0.809065 1.617307e-25 2.802307e-21 8.491840e-23
34 8037732 8151625 AF495523 REXO1L1 link to infopage 0.809065 1.617307e-25 2.802307e-21 8.242080e-23
35 8037732 8131096 NM_001128636 ELFN1 link to infopage 0.807972 2.106476e-25 3.649892e-21 1.042826e-22
36 8037732 7991939 NM_145294 WDR90 link to infopage 0.806678 2.873751e-25 4.979349e-21 1.383152e-22
37 8037732 7992758 NM_172229 KREMEN2 link to infopage 0.804456 4.871276e-25 8.440460e-21 2.281205e-22
38 8037732 8038299 NM_033142 CGB7 link to infopage 0.804008 5.413507e-25 9.379984e-21 2.468417e-22
39 8037732 8153346 NM_023946 LYNX1 link to infopage 0.803747 5.756665e-25 9.974573e-21 2.557583e-22
40 8037732 8008228 NM_138281 DLX4 link to infopage 0.803379 6.276454e-25 1.087521e-20 2.718803e-22
41 8037732 8075126 NM_002430 MN1 link to infopage 0.803114 6.678187e-25 1.157129e-20 2.822267e-22
42 8037732 8021199 NM_002747 MAPK4 link to infopage 0.803103 6.696754e-25 1.160347e-20 2.762730e-22
43 8037732 8036270 NM_152658 THAP8 link to infopage 0.803085 6.724042e-25 1.165075e-20 2.709476e-22
44 8037732 8036072 NM_207392 KRTDAP link to infopage 0.801613 9.477451e-25 1.642158e-20 3.732177e-22
45 8037732 8064242 NR_027686 NCRNA00176 link to infopage 0.800380 1.260755e-24 2.184509e-20 4.854465e-22
46 8037732 7923360 NM_003281 TNNI1 link to infopage 0.800232 1.304521e-24 2.260343e-20 4.913790e-22
47 8037732 7905507 NM_178428 LCE2A link to infopage 0.800184 1.319018e-24 2.285462e-20 4.862685e-22
48 8037732 8125383 NM_004557 NOTCH4 link to infopage 0.800118 1.339191e-24 2.320416e-20 4.834200e-22
49 8037732 8086540 NM_020208 SLC6A20 link to infopage 0.800113 1.340853e-24 2.323296e-20 4.741420e-22
50 8037732 8053728 NM_000798 DRD5 link to infopage 0.799910 1.404802e-24 2.434101e-20 4.868201e-22

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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