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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 15401.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
15401 8151625 AF495523 REXO1L1 link to infopage REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1

Fetching correlation data, please wait...
Getting list of correlations for id 15401.
Getting list of p-values for id 15401.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.120 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8151625 8151613 AF495523 REXO1L1 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 8151625 8151621 AF495523 REXO1L1 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
3 8151625 8151605 AF495523 REXO1L1 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
4 8151625 8151617 AF495523 REXO1L1 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
5 8151625 8151629 link to infopage 0.921571 4.008553e-44 6.945620e-40 1.389124e-40
6 8151625 8048551 NM_005876 SPEG link to infopage 0.849767 2.106530e-30 3.649984e-26 6.083306e-27
7 8151625 8060604 NM_000915 OXT link to infopage 0.836030 1.320105e-28 2.287345e-24 3.267636e-25
8 8151625 8013602 NM_001080837 SEBOX link to infopage 0.834700 1.931240e-28 3.346260e-24 4.182825e-25
9 8151625 8003939 NM_003963 TM4SF5 link to infopage 0.832814 3.292617e-28 5.705118e-24 6.339020e-25
10 8151625 7992845 NM_003456 ZNF205 link to infopage 0.827688 1.358199e-27 2.353352e-23 2.353352e-24
11 8151625 8137336 NM_004769 ACCN3 link to infopage 0.827142 1.575018e-27 2.729034e-23 2.480940e-24
12 8151625 8132070 NM_002047 GARS link to infopage -0.825554 2.416410e-27 4.186914e-23 3.489095e-24
13 8151625 8094704 NM_005339 UBE2K link to infopage -0.824986 2.813393e-27 4.874766e-23 3.749820e-24
14 8151625 8068136 NM_181600 KRTAP13-4 link to infopage 0.823607 4.059802e-27 7.034419e-23 5.024585e-24
15 8151625 8115849 link to infopage 0.823570 4.100747e-27 7.105364e-23 4.736909e-24
16 8151625 8016640 NR_024193 HILS1 link to infopage 0.821616 6.858190e-27 1.188319e-22 7.426991e-24
17 8151625 8060325 NM_207469 DEFB132 link to infopage 0.820614 8.905846e-27 1.543116e-22 9.077153e-24
18 8151625 8131087 NM_001080461 UNCX link to infopage 0.818107 1.700254e-26 2.946030e-22 1.636683e-23
19 8151625 8038577 NM_001024656 ASPDH link to infopage 0.816345 2.663118e-26 4.614384e-22 2.428623e-23
20 8151625 7993165 link to infopage 0.815954 2.940217e-26 5.094513e-22 2.547257e-23
21 8151625 8038299 NM_033142 CGB7 link to infopage 0.815318 3.451211e-26 5.979913e-22 2.847578e-23
22 8151625 8125805 NM_000841 GRM4 link to infopage 0.813707 5.167159e-26 8.953137e-22 4.069608e-23
23 8151625 8078738 NM_005109 OXSR1 link to infopage -0.813273 5.756461e-26 9.974220e-22 4.336617e-23
24 8151625 8024306 NM_005883 APC2 link to infopage 0.813126 5.970331e-26 1.034479e-21 4.310330e-23
25 8151625 8015366 NM_000526 KRT14 link to infopage 0.811468 8.994330e-26 1.558448e-21 6.233790e-23
26 8151625 7940959 NM_020155 GPR137 link to infopage 0.811268 9.447196e-26 1.636916e-21 6.295829e-23
27 8151625 7896882 NM_001130413 SCNN1D link to infopage 0.810700 1.086114e-25 1.881910e-21 6.970037e-23
28 8151625 8037732 NM_001029861 NANOS2 link to infopage 0.809065 1.617307e-25 2.802307e-21 1.000824e-22
29 8151625 7911676 BC028413 link to infopage 0.808113 2.035901e-25 3.527606e-21 1.216416e-22
30 8151625 8080142 ENST00000411318 link to infopage 0.806386 3.081382e-25 5.339110e-21 1.779703e-22
31 8151625 8013112 NM_016084 RASD1 link to infopage 0.804545 4.770134e-25 8.265211e-21 2.666197e-22
32 8151625 8035801 ENST00000364165 link to infopage 0.804502 4.818755e-25 8.349458e-21 2.609205e-22
33 8151625 8056041 link to infopage 0.803429 6.203032e-25 1.074799e-20 3.256968e-22
34 8151625 7980463 NM_012245 SNW1 link to infopage -0.802439 7.821185e-25 1.355177e-20 3.985814e-22
35 8151625 8061799 NM_174897 BPIL3 link to infopage 0.802079 8.504713e-25 1.473612e-20 4.210319e-22
36 8151625 8070786 NM_198688 KRTAP10-6 link to infopage 0.802042 8.577501e-25 1.486224e-20 4.128399e-22
37 8151625 7919564 ENST00000365297 link to infopage 0.801469 9.800418e-25 1.698118e-20 4.589509e-22
38 8151625 8101000 ENST00000437185 link to infopage 0.800889 1.120926e-24 1.942228e-20 5.111126e-22
39 8151625 8070896 AF427488 C21orf93 link to infopage 0.798394 1.988078e-24 3.444742e-20 8.832672e-22
40 8151625 8148517 NM_001702 BAI1 link to infopage 0.797851 2.249495e-24 3.897701e-20 9.744251e-22
41 8151625 8134407 NM_005222 DLX6 link to infopage 0.797268 2.568108e-24 4.449760e-20 1.085307e-21
42 8151625 8066754 NM_080721 C20orf123 link to infopage 0.796817 2.843868e-24 4.927571e-20 1.173231e-21
43 8151625 8067270 NM_153360 APCDD1L link to infopage 0.796319 3.182045e-24 5.513530e-20 1.282216e-21
44 8151625 7940002 NM_001005210 LRRC55 link to infopage 0.796279 3.211023e-24 5.563739e-20 1.264486e-21
45 8151625 8040927 NM_013392 NRBP1 link to infopage -0.796075 3.361733e-24 5.824876e-20 1.294417e-21
46 8151625 8034469 NM_032301 FBXW9 link to infopage 0.795072 4.210781e-24 7.296021e-20 1.586091e-21
47 8151625 7998700 NM_001009944 PKD1 link to infopage 0.793705 5.712141e-24 9.897426e-20 2.105835e-21
48 8151625 8066668 NM_020967 NCOA5 link to infopage -0.793588 5.862426e-24 1.015783e-19 2.116214e-21
49 8151625 8159036 NM_139025 ADAMTS13 link to infopage 0.793132 6.485515e-24 1.123745e-19 2.293357e-21
50 8151625 8137330 ENST00000356058 link to infopage 0.792995 6.685941e-24 1.158473e-19 2.316946e-21

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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