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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 16998.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
16998 7919564 ENST00000365297 link to infopage

Fetching correlation data, please wait...
Getting list of correlations for id 16998.
Getting list of p-values for id 16998.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.112 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7919564 8137330 ENST00000356058 link to infopage 0.861955 3.732702e-32 6.467653e-28 6.467653e-28
2 7919564 7969372 ENST00000362412 link to infopage 0.860734 5.687839e-32 9.855318e-28 4.927659e-28
3 7919564 8056041 link to infopage 0.858042 1.419114e-31 2.458899e-27 8.196330e-28
4 7919564 8136589 ENST00000410791 link to infopage 0.855296 3.538829e-31 6.131730e-27 1.532932e-27
5 7919564 8131087 NM_001080461 UNCX link to infopage 0.837314 9.117212e-29 1.579739e-24 3.159479e-25
6 7919564 8037732 NM_001029861 NANOS2 link to infopage 0.824061 3.599531e-27 6.236908e-23 1.039485e-23
7 7919564 8039504 NM_001145176 SHISA7 link to infopage 0.823636 4.029162e-27 6.981330e-23 9.973328e-24
8 7919564 7992758 NM_172229 KREMEN2 link to infopage 0.821514 7.043945e-27 1.220504e-22 1.525631e-23
9 7919564 8013259 ENST00000300983 link to infopage 0.819239 1.271501e-26 2.203129e-22 2.447921e-23
10 7919564 7899287 ENST00000457038 link to infopage 0.812896 6.321957e-26 1.095405e-21 1.095405e-22
11 7919564 8028600 NM_001001414 NCCRP1 link to infopage 0.812629 6.753126e-26 1.170114e-21 1.063740e-22
12 7919564 8030015 NM_012451 SYNGR4 link to infopage 0.810523 1.134188e-25 1.965207e-21 1.637673e-22
13 7919564 8164562 NM_199350 C9orf50 link to infopage 0.810338 1.186394e-25 2.055666e-21 1.581281e-22
14 7919564 8013112 NM_016084 RASD1 link to infopage 0.808477 1.865001e-25 3.231488e-21 2.308206e-22
15 7919564 8166663 link to infopage 0.808379 1.909282e-25 3.308213e-21 2.205475e-22
16 7919564 8052018 NM_022055 KCNK12 link to infopage 0.807653 2.274676e-25 3.941332e-21 2.463332e-22
17 7919564 7941743 NM_024036 LRFN4 link to infopage 0.806486 3.008673e-25 5.213127e-21 3.066545e-22
18 7919564 7991939 NM_145294 WDR90 link to infopage 0.804406 4.929162e-25 8.540758e-21 4.744866e-22
19 7919564 8053728 NM_000798 DRD5 link to infopage 0.803422 6.213723e-25 1.076652e-20 5.666588e-22
20 7919564 8003939 NM_003963 TM4SF5 link to infopage 0.803055 6.772067e-25 1.173396e-20 5.866980e-22
21 7919564 8099132 NM_018659 CYTL1 link to infopage 0.802407 7.879357e-25 1.365256e-20 6.501220e-22
22 7919564 8006063 NM_152345 ANKRD13B link to infopage 0.801752 9.177792e-25 1.590236e-20 7.228346e-22
23 7919564 8151621 AF495523 REXO1L1 link to infopage 0.801469 9.800418e-25 1.698118e-20 7.383124e-22
24 7919564 8151605 AF495523 REXO1L1 link to infopage 0.801469 9.800418e-25 1.698118e-20 7.075494e-22
25 7919564 8151625 AF495523 REXO1L1 link to infopage 0.801469 9.800418e-25 1.698118e-20 6.792474e-22
26 7919564 8151617 AF495523 REXO1L1 link to infopage 0.801469 9.800418e-25 1.698118e-20 6.531225e-22
27 7919564 8151613 AF495523 REXO1L1 link to infopage 0.801469 9.800418e-25 1.698118e-20 6.289328e-22
28 7919564 8000746 link to infopage 0.800795 1.145713e-24 1.985177e-20 7.089918e-22
29 7919564 8111216 ENST00000426411 link to infopage 0.800340 1.272526e-24 2.204907e-20 7.603126e-22
30 7919564 8131096 NM_001128636 ELFN1 link to infopage 0.797566 2.399848e-24 4.158216e-20 1.386072e-21
31 7919564 7927099 NR_026827 LOC84856 link to infopage 0.797168 2.626701e-24 4.551285e-20 1.468157e-21
32 7919564 8055478 NM_007226 NXPH2 link to infopage 0.795563 3.772424e-24 6.536479e-20 2.042650e-21
33 7919564 8153862 NM_001024678 LRRC24 link to infopage 0.795227 4.066904e-24 7.046724e-20 2.135371e-21
34 7919564 8072941 NM_003614 GALR3 link to infopage 0.795167 4.122036e-24 7.142253e-20 2.100663e-21
35 7919564 8046276 NM_001003845 SP5 link to infopage 0.794480 4.806272e-24 8.327828e-20 2.379380e-21
36 7919564 8031084 NM_031895 CACNG8 link to infopage 0.793937 5.424742e-24 9.399451e-20 2.610959e-21
37 7919564 8086540 NM_020208 SLC6A20 link to infopage 0.793458 6.033110e-24 1.045357e-19 2.825289e-21
38 7919564 8070771 NM_198691 KRTAP10-1 link to infopage 0.793050 6.604037e-24 1.144282e-19 3.011267e-21
39 7919564 8038299 NM_033142 CGB7 link to infopage 0.793002 6.675236e-24 1.156618e-19 2.965688e-21
40 7919564 8121209 NM_005604 POU3F2 link to infopage 0.793000 6.677854e-24 1.157072e-19 2.892679e-21
41 7919564 7896882 NM_001130413 SCNN1D link to infopage 0.792765 7.034188e-24 1.218814e-19 2.972716e-21
42 7919564 8064394 ENST00000217256 link to infopage 0.792431 7.572741e-24 1.312129e-19 3.124116e-21
43 7919564 8031157 NM_020659 TTYH1 link to infopage 0.791845 8.615549e-24 1.492816e-19 3.471665e-21
44 7919564 8030181 NM_033378 CGB2 link to infopage 0.791759 8.780968e-24 1.521478e-19 3.457905e-21
45 7919564 8163599 NM_015404 DFNB31 link to infopage 0.791239 9.841313e-24 1.705204e-19 3.789343e-21
46 7919564 7904955 link to infopage 0.791042 1.027574e-23 1.780477e-19 3.870602e-21
47 7919564 8020455 NM_005257 GATA6 link to infopage 0.790622 1.126336e-23 1.951602e-19 4.152344e-21
48 7919564 8030842 hsa-mir-99b link to infopage 0.790556 1.142706e-23 1.979967e-19 4.124931e-21
49 7919564 8126379 ENST00000341865 link to infopage 0.789711 1.373690e-23 2.380193e-19 4.857536e-21
50 7919564 8007363 NM_032387 WNK4 link to infopage 0.789531 1.428666e-23 2.475450e-19 4.950900e-21

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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