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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
4006 7923347 NM_005558 LAD1 link to infopage ladinin 1

Fetching correlation data, please wait...
Getting list of correlations for id 4006.
Getting list of p-values for id 4006.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.147 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7923347 8131056 NM_017781 CYP2W1 link to infopage 0.814124 4.656793e-26 8.068825e-22 8.068825e-22
2 7923347 8137783 NM_001097620 TMEM184A link to infopage 0.794223 5.089821e-24 8.819134e-20 4.409567e-20
3 7923347 8001014 NM_173502 PRSS36 link to infopage 0.791722 8.852422e-24 1.533859e-19 5.112864e-20
4 7923347 8157804 NM_182487 OLFML2A link to infopage 0.783689 4.979810e-23 8.628517e-19 2.157129e-19
5 7923347 7987701 NM_016642 SPTBN5 link to infopage 0.783324 5.377446e-23 9.317501e-19 1.863500e-19
6 7923347 8159670 NM_006647 NOXA1 link to infopage 0.782502 6.387836e-23 1.106820e-18 1.844701e-19
7 7923347 8019331 NM_001145113 MYADML2 link to infopage 0.781900 7.244235e-23 1.255209e-18 1.793155e-19
8 7923347 8067820 BC024764 IQSEC3 link to infopage 0.781148 8.470838e-23 1.467742e-18 1.834678e-19
9 7923347 7997801 NM_013278 IL17C link to infopage 0.777994 1.622020e-22 2.810473e-18 3.122748e-19
10 7923347 8083887 NM_005602 CLDN11 link to infopage 0.776542 2.179254e-22 3.775993e-18 3.775993e-19
11 7923347 7916654 NM_181712 KANK4 link to infopage 0.775481 2.700966e-22 4.679964e-18 4.254513e-19
12 7923347 8013384 NM_000691 ALDH3A1 link to infopage 0.774054 3.597182e-22 6.232837e-18 5.194031e-19
13 7923347 8032699 NM_015174 ZFR2 link to infopage 0.770505 7.273359e-22 1.260255e-17 9.694268e-19
14 7923347 8018379 NM_020753 CASKIN2 link to infopage 0.770186 7.743344e-22 1.341689e-17 9.583494e-19
15 7923347 7913450 NM_005529 HSPG2 link to infopage 0.769372 9.082215e-22 1.573675e-17 1.049117e-18
16 7923347 7896761 NM_152486 SAMD11 link to infopage 0.768993 9.779718e-22 1.694532e-17 1.059082e-18
17 7923347 8119435 NM_004828 NCR2 link to infopage 0.766359 1.629439e-21 2.823329e-17 1.660782e-18
18 7923347 7927367 NM_001040084 ANXA8 link to infopage 0.765219 2.027976e-21 3.513874e-17 1.952152e-18
19 7923347 8086985 NM_000094 COL7A1 link to infopage 0.764886 2.161588e-21 3.745384e-17 1.971255e-18
20 7923347 8028407 NM_000540 RYR1 link to infopage 0.764429 2.358587e-21 4.086723e-17 2.043362e-18
21 7923347 8115691 NM_003062 SLIT3 link to infopage 0.763834 2.641387e-21 4.576731e-17 2.179396e-18
22 7923347 7927307 NM_001630 ANXA8L2 link to infopage 0.763713 2.702917e-21 4.683345e-17 2.128793e-18
23 7923347 8125383 NM_004557 NOTCH4 link to infopage 0.763641 2.740255e-21 4.748040e-17 2.064365e-18
24 7923347 8151609 NM_172239 REXO1L1 link to infopage 0.763180 2.990633e-21 5.181870e-17 2.159113e-18
25 7923347 8060126 NM_198998 AQP12A link to infopage 0.763160 3.002096e-21 5.201731e-17 2.080692e-18
26 7923347 7952893 BC024764 IQSEC3 link to infopage 0.763044 3.068770e-21 5.317257e-17 2.045099e-18
27 7923347 8000467 NM_001109763 GSG1L link to infopage 0.762938 3.130667e-21 5.424506e-17 2.009076e-18
28 7923347 7898616 NM_022819 PLA2G2F link to infopage 0.762927 3.137498e-21 5.436343e-17 1.941551e-18
29 7923347 7914667 NM_052896 CSMD2 link to infopage 0.762889 3.159670e-21 5.474760e-17 1.887848e-18
30 7923347 8164077 NM_004959 NR5A1 link to infopage 0.762547 3.371193e-21 5.841266e-17 1.947089e-18
31 7923347 8159624 BC052297 C9orf169 link to infopage 0.762170 3.619514e-21 6.271531e-17 2.023075e-18
32 7923347 8075934 NM_014550 CARD10 link to infopage 0.761506 4.101930e-21 7.107415e-17 2.221067e-18
33 7923347 8064108 BC000912 C20orf195 link to infopage 0.761491 4.113168e-21 7.126885e-17 2.159662e-18
34 7923347 7937560 NM_002457 MUC2 link to infopage 0.760989 4.519895e-21 7.831622e-17 2.303418e-18
35 7923347 7992049 NM_207112 HAGHL link to infopage 0.760641 4.824073e-21 8.358672e-17 2.388192e-18
36 7923347 8157610 NM_032552 DAB2IP link to infopage 0.760055 5.382453e-21 9.326177e-17 2.590605e-18
37 7923347 8158825 NM_032728 PPAPDC3 link to infopage 0.758801 6.796875e-21 1.177694e-16 3.182958e-18
38 7923347 8170562 NM_175742 MAGEA2 link to infopage 0.758532 7.145366e-21 1.238078e-16 3.258099e-18
39 7923347 8090343 NM_014079 KLF15 link to infopage 0.757634 8.435327e-21 1.461589e-16 3.747664e-18
40 7923347 8153322 NM_015193 ARC link to infopage 0.757176 9.178803e-21 1.590411e-16 3.976028e-18
41 7923347 8027556 NM_002333 LRP3 link to infopage 0.756712 9.995165e-21 1.731862e-16 4.224054e-18
42 7923347 8135099 NM_133457 EMID2 link to infopage 0.756662 1.008820e-20 1.747983e-16 4.161864e-18
43 7923347 8010237 ENST00000340363 link to infopage 0.756249 1.088038e-20 1.885243e-16 4.384286e-18
44 7923347 8049729 NM_198998 AQP12A link to infopage 0.756220 1.093897e-20 1.895395e-16 4.307715e-18
45 7923347 8175732 NM_175742 MAGEA2 link to infopage 0.756011 1.136688e-20 1.969539e-16 4.376754e-18
46 7923347 8125843 NM_012391 SPDEF link to infopage 0.755964 1.146339e-20 1.986261e-16 4.317959e-18
47 7923347 7949344 NM_005468 NAALADL1 link to infopage 0.755912 1.157417e-20 2.005456e-16 4.266929e-18
48 7923347 7915257 NM_022120 OXCT2 link to infopage 0.755316 1.290541e-20 2.236120e-16 4.658584e-18
49 7923347 7900352 NM_022120 OXCT2 link to infopage 0.755316 1.290541e-20 2.236120e-16 4.563510e-18
50 7923347 7921936 NM_177398 LMX1A link to infopage 0.755078 1.347666e-20 2.335101e-16 4.670203e-18

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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