[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
1566	7980605	NM_021161	KCNK10		potassium channel, subfamily K, member 10

Fetching correlation data, please wait...
Getting list of correlations for id 1566.
Getting list of p-values for id 1566.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.135 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7980605	8079021	NM_001904	CTNNB1	-0.697741	1.331719e-16	2.307469e-12	2.307469e-12
2	7980605	8100902	NM_032217	ANKRD17	-0.689239	4.341989e-16	7.523365e-12	3.761682e-12
3	7980605	8116384	NM_175062	RASGEF1C	0.682713	1.046905e-15	1.813973e-11	6.046576e-12
4	7980605	7942123	NM_053056	CCND1	0.679757	1.548257e-15	2.682665e-11	6.706662e-12
5	7980605	7948937	NM_004254	SLC22A8	0.679626	1.575087e-15	2.729154e-11	5.458307e-12
6	7980605	8024566	ENST00000433476		0.678743	1.768597e-15	3.064447e-11	5.107412e-12
7	7980605	7909642	NM_024749	VASH2	0.677301	2.135463e-15	3.700117e-11	5.285882e-12
8	7980605	8123334	NR_027284	LOC441177	0.676319	2.426312e-15	4.204070e-11	5.255088e-12
9	7980605	7917156	NM_003902	FUBP1	-0.674135	3.217727e-15	5.575355e-11	6.194839e-12
10	7980605	7913571	NM_001102398	HNRNPR	-0.670764	4.951176e-15	8.578903e-11	8.578903e-12
11	7980605	7898616	NM_022819	PLA2G2F	0.669583	5.750779e-15	9.964374e-11	9.058522e-12
12	7980605	7983663	NM_005154	USP8	-0.669169	6.059772e-15	1.049977e-10	8.749805e-12
13	7980605	8076865	NM_001001694	IL17REL	0.668911	6.260289e-15	1.084720e-10	8.344002e-12
14	7980605	8170716	NM_005393	PLXNB3	0.668371	6.701041e-15	1.161089e-10	8.293495e-12
15	7980605	8042119	NM_022894	PAPOLG	-0.665131	1.005002e-14	1.741366e-10	1.160911e-11
16	7980605	8090070	NM_183357	ADCY5	0.664790	1.048416e-14	1.816591e-10	1.135369e-11
17	7980605	7937612	NM_002458	MUC5B	0.664469	1.090982e-14	1.890345e-10	1.111968e-11
18	7980605	7946661	NM_015881	DKK3	0.662977	1.312102e-14	2.273480e-10	1.263044e-11
19	7980605	8137596	NM_014671	UBE3C	-0.662289	1.428024e-14	2.474338e-10	1.302283e-11
20	7980605	8053872	NM_001002036	ASTL	0.661035	1.665501e-14	2.885814e-10	1.442907e-11
21	7980605	7942717	NM_000260	MYO7A	0.659907	1.911557e-14	3.312155e-10	1.577217e-11
22	7980605	8154333	NM_015061	KDM4C	-0.659561	1.993771e-14	3.454607e-10	1.570276e-11
23	7980605	8116033	NM_000505	F12	0.659377	2.038765e-14	3.532568e-10	1.535899e-11
24	7980605	8097867	NM_015196	KIAA0922	-0.659353	2.044832e-14	3.543080e-10	1.476283e-11
25	7980605	8083429	NM_021038	MBNL1	-0.659106	2.107200e-14	3.651145e-10	1.460458e-11
26	7980605	8040469	AY189285	LOC100131373	0.658212	2.348561e-14	4.069352e-10	1.565135e-11
27	7980605	7970241	NM_000504	F10	0.657088	2.689911e-14	4.660809e-10	1.726225e-11
28	7980605	7924342	NM_018713	SLC30A10	0.656887	2.755872e-14	4.775100e-10	1.705393e-11
29	7980605	8148517	NM_001702	BAI1	0.656819	2.778683e-14	4.814625e-10	1.660215e-11
30	7980605	7972438	NM_178861	RNF113B	0.655773	3.151110e-14	5.459928e-10	1.819976e-11
31	7980605	8175434	NM_054021	GPR101	0.655711	3.174420e-14	5.500318e-10	1.774296e-11
32	7980605	8110894	NM_017755	NSUN2	-0.655367	3.308036e-14	5.731835e-10	1.791198e-11
33	7980605	7927383	NM_153034	ZNF488	0.655332	3.322089e-14	5.756184e-10	1.744298e-11
34	7980605	7897890	NM_015378	VPS13D	-0.654688	3.588160e-14	6.217205e-10	1.828590e-11
35	7980605	8051464	NM_019024	HEATR5B	-0.653774	4.001408e-14	6.933240e-10	1.980926e-11
36	7980605	8138450	NM_152898	FERD3L	0.653475	4.146520e-14	7.184675e-10	1.995743e-11
37	7980605	8093112	NM_015562	UBXN7	-0.653315	4.226093e-14	7.322551e-10	1.979068e-11
38	7980605	7913450	NM_005529	HSPG2	0.653135	4.317320e-14	7.480620e-10	1.968584e-11
39	7980605	8096556	NM_015143	METAP1	-0.652724	4.533328e-14	7.854897e-10	2.014076e-11
40	7980605	7910706	NM_006499	LGALS8	-0.651916	4.988296e-14	8.643220e-10	2.160805e-11
41	7980605	7966517	NM_001109662	C12orf51	-0.651912	4.990655e-14	8.647308e-10	2.109100e-11
42	7980605	8129099	NM_003309	TSPYL1	-0.651886	5.005990e-14	8.673879e-10	2.065209e-11
43	7980605	8126566	BC108661	C6orf154	0.651284	5.374704e-14	9.312750e-10	2.165756e-11
44	7980605	8058997	NM_017431	PRKAG3	0.651240	5.403119e-14	9.361985e-10	2.127724e-11
45	7980605	7987701	NM_016642	SPTBN5	0.649970	6.273532e-14	1.087015e-9	2.415588e-11
46	7980605	7929664	NM_138413	DHDPSL	0.649909	6.318476e-14	1.094802e-9	2.380005e-11
47	7980605	8138670	NM_031243	HNRNPA2B1	-0.648549	7.409641e-14	1.283869e-9	2.731635e-11
48	7980605	8166335	NM_000284	PDHA1	-0.648265	7.658642e-14	1.327013e-9	2.764610e-11
49	7980605	8135990	NM_001458	FLNC	0.648155	7.757784e-14	1.344191e-9	2.743248e-11
50	7980605	8151842	NM_015496	KIAA1429	-0.647827	8.059964e-14	1.396550e-9	2.793100e-11

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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