[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
3999 8086391 NM_000729 CCK link to infopage cholecystokinin

Fetching correlation data, please wait...
Getting list of correlations for id 3999.
Getting list of p-values for id 3999.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.134 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8086391 7966690 NM_016569 TBX3 link to infopage 0.822607 5.288054e-27 9.162611e-23 9.162611e-23
2 8086391 8000467 NM_001109763 GSG1L link to infopage 0.821322 7.405481e-27 1.283148e-22 6.415739e-23
3 8086391 8151609 NM_172239 REXO1L1 link to infopage 0.819767 1.109400e-26 1.922257e-22 6.407523e-23
4 8086391 8125383 NM_004557 NOTCH4 link to infopage 0.817193 2.147171e-26 3.720404e-22 9.301010e-23
5 8086391 8075200 NM_012265 RHBDD3 link to infopage 0.816848 2.344384e-26 4.062113e-22 8.124227e-23
6 8086391 8137330 ENST00000356058 link to infopage 0.814124 4.656480e-26 8.068283e-22 1.344714e-22
7 8086391 8006562 NM_033315 RASL10B link to infopage 0.811840 8.207168e-26 1.422056e-21 2.031509e-22
8 8086391 8039362 NM_178837 C19orf51 link to infopage 0.811727 8.440217e-26 1.462436e-21 1.828046e-22
9 8086391 8110382 NM_030567 PRR7 link to infopage 0.811103 9.839217e-26 1.704841e-21 1.894268e-22
10 8086391 8074131 NM_001080420 SHANK3 link to infopage 0.811001 1.008840e-25 1.748017e-21 1.748017e-22
11 8086391 8033462 NM_206833 CTXN1 link to infopage 0.810320 1.191724e-25 2.064899e-21 1.877181e-22
12 8086391 8050805 NM_001035256 POMC link to infopage 0.810100 1.257381e-25 2.178664e-21 1.815553e-22
13 8086391 8067409 NM_005560 LAMA5 link to infopage 0.809722 1.378979e-25 2.389357e-21 1.837967e-22
14 8086391 8162920 NM_147180 PPP3R2 link to infopage 0.807367 2.436274e-25 4.221332e-21 3.015237e-22
15 8086391 7949015 NM_001144936 C11orf95 link to infopage 0.807256 2.501879e-25 4.335006e-21 2.890004e-22
16 8086391 8076169 NM_014293 NPTXR link to infopage 0.806864 2.748195e-25 4.761797e-21 2.976123e-22
17 8086391 7937560 NM_002457 MUC2 link to infopage 0.806348 3.109322e-25 5.387522e-21 3.169131e-22
18 8086391 7935983 NM_005029 PITX3 link to infopage 0.806151 3.258656e-25 5.646273e-21 3.136818e-22
19 8086391 8075126 NM_002430 MN1 link to infopage 0.804729 4.567546e-25 7.914186e-21 4.165361e-22
20 8086391 8074892 NR_003950 ZDHHC8P1 link to infopage 0.804694 4.604911e-25 7.978929e-21 3.989464e-22
21 8086391 8001449 NM_024336 IRX3 link to infopage 0.804236 5.131175e-25 8.890787e-21 4.233708e-22
22 8086391 8013112 NM_016084 RASD1 link to infopage 0.801766 9.148183e-25 1.585106e-20 7.205025e-22
23 8086391 8131056 NM_017781 CYP2W1 link to infopage 0.801312 1.016339e-24 1.761011e-20 7.656569e-22
24 8086391 8073449 NM_014460 CSDC2 link to infopage 0.800555 1.210923e-24 2.098166e-20 8.742360e-22
25 8086391 7992845 NM_003456 ZNF205 link to infopage 0.800065 1.355677e-24 2.348981e-20 9.395923e-22
26 8086391 8028389 NM_001042522 SPRED3 link to infopage 0.799650 1.491289e-24 2.583956e-20 9.938294e-22
27 8086391 7991939 NM_145294 WDR90 link to infopage 0.799276 1.625202e-24 2.815987e-20 1.042958e-21
28 8086391 8159670 NM_006647 NOXA1 link to infopage 0.799015 1.725182e-24 2.989224e-20 1.067580e-21
29 8086391 8098721 ENST00000362702 link to infopage 0.798896 1.772606e-24 3.071394e-20 1.059101e-21
30 8086391 7992147 NM_021098 CACNA1H link to infopage 0.797527 2.421565e-24 4.195845e-20 1.398615e-21
31 8086391 8038299 NM_033142 CGB7 link to infopage 0.796825 2.838789e-24 4.918770e-20 1.586700e-21
32 8086391 8049799 NM_001001891 ANO7 link to infopage 0.796503 3.052776e-24 5.289544e-20 1.652983e-21
33 8086391 8030842 hsa-mir-99b link to infopage 0.795590 3.748883e-24 6.495690e-20 1.968391e-21
34 8086391 8076007 NM_025045 BAIAP2L2 link to infopage 0.795020 4.260315e-24 7.381847e-20 2.171132e-21
35 8086391 7923360 NM_003281 TNNI1 link to infopage 0.793101 6.531014e-24 1.131629e-19 3.233225e-21
36 8086391 7991296 NM_198525 KIF7 link to infopage 0.792414 7.600291e-24 1.316902e-19 3.658062e-21
37 8086391 8153876 NM_025251 ARHGAP39 link to infopage 0.792232 7.912325e-24 1.370969e-19 3.705321e-21
38 8086391 7900352 NM_022120 OXCT2 link to infopage 0.791465 9.366778e-24 1.622982e-19 4.271004e-21
39 8086391 7915257 NM_022120 OXCT2 link to infopage 0.791465 9.366778e-24 1.622982e-19 4.161491e-21
40 8086391 8030181 NM_033378 CGB2 link to infopage 0.791370 9.563256e-24 1.657025e-19 4.142563e-21
41 8086391 7911413 NM_003327 TNFRSF4 link to infopage 0.791308 9.694168e-24 1.679709e-19 4.096850e-21
42 8086391 7947928 NM_031909 C1QTNF4 link to infopage 0.791241 9.837860e-24 1.704606e-19 4.058586e-21
43 8086391 7945162 NM_003658 BARX2 link to infopage 0.790702 1.106905e-23 1.917933e-19 4.460310e-21
44 8086391 8074063 NM_024866 ADM2 link to infopage 0.790266 1.217422e-23 2.109428e-19 4.794154e-21
45 8086391 8031157 NM_020659 TTYH1 link to infopage 0.790027 1.282535e-23 2.222249e-19 4.938331e-21
46 8086391 8093826 NM_000683 ADRA2C link to infopage 0.789895 1.319948e-23 2.287074e-19 4.971899e-21
47 8086391 7911435 NM_001014980 FAM132A link to infopage 0.789515 1.433471e-23 2.483776e-19 5.284629e-21
48 8086391 8098512 NM_021942 C4orf41 link to infopage -0.789360 1.482678e-23 2.569037e-19 5.352160e-21
49 8086391 8023984 NM_001194 HCN2 link to infopage 0.789256 1.516322e-23 2.627330e-19 5.361899e-21
50 8086391 8156415 NM_006648 WNK2 link to infopage 0.789188 1.538918e-23 2.666483e-19 5.332967e-21

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!