[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
3915	8148850	NM_174922	ADCK5		aarF domain containing kinase 5

Fetching correlation data, please wait...
Getting list of correlations for id 3915.
Getting list of p-values for id 3915.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.150 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8148850	8159670	NM_006647	NOXA1	0.778768	1.384407e-22	2.398762e-18	2.398762e-18
2	8148850	7911435	NM_001014980	FAM132A	0.757751	8.254488e-21	1.430255e-16	7.151276e-17
3	8148850	8021113	NM_145055	C18orf25	-0.754685	1.447648e-20	2.508341e-16	8.361135e-17
4	8148850	7896985	NM_080875	MIB2	0.754086	1.613982e-20	2.796546e-16	6.991365e-17
5	8148850	8133704	NM_001110199	SRRM3	0.752346	2.209891e-20	3.829079e-16	7.658157e-17
6	8148850	8005328	NM_016239	MYO15A	0.752345	2.210323e-20	3.829826e-16	6.383044e-17
7	8148850	8153876	NM_025251	ARHGAP39	0.748509	4.379205e-20	7.587849e-16	1.083978e-16
8	8148850	8045381	NM_058241	CCNT2	-0.747891	4.883382e-20	8.461436e-16	1.057680e-16
9	8148850	8098512	NM_021942	C4orf41	-0.747293	5.425093e-20	9.400059e-16	1.044451e-16
10	8148850	7983663	NM_005154	USP8	-0.746356	6.392935e-20	1.107704e-15	1.107704e-16
11	8148850	8115606	NM_006425	SLU7	-0.744997	8.102015e-20	1.403836e-15	1.276215e-16
12	8148850	8032034	NM_001136263	C2CD4C	0.743860	9.866452e-20	1.709560e-15	1.424633e-16
13	8148850	8098721	ENST00000362702		0.742194	1.314257e-19	2.277213e-15	1.751703e-16
14	8148850	8074558	NM_023004	RTN4R	0.741070	1.592957e-19	2.760117e-15	1.971512e-16
15	8148850	7935983	NM_005029	PITX3	0.740830	1.659388e-19	2.875222e-15	1.916815e-16
16	8148850	8120022	NM_001253	CDC5L	-0.740816	1.663485e-19	2.882320e-15	1.801450e-16
17	8148850	8143941	NM_198285	WDR86	0.740310	1.813040e-19	3.141455e-15	1.847914e-16
18	8148850	7929201	NM_003972	BTAF1	-0.737560	2.885511e-19	4.999725e-15	2.777625e-16
19	8148850	8093807	NM_173660	DOK7	0.736906	3.219581e-19	5.578569e-15	2.936089e-16
20	8148850	8029870	NM_002517	NPAS1	0.736380	3.515652e-19	6.091570e-15	3.045785e-16
21	8148850	7992049	NM_207112	HAGHL	0.734932	4.474250e-19	7.752534e-15	3.691683e-16
22	8148850	8075126	NM_002430	MN1	0.734563	4.756656e-19	8.241859e-15	3.746299e-16
23	8148850	8093826	NM_000683	ADRA2C	0.733941	5.271664e-19	9.134212e-15	3.971396e-16
24	8148850	8031511	NM_153219	ZNF524	0.732754	6.410831e-19	1.110805e-14	4.628353e-16
25	8148850	8006063	NM_152345	ANKRD13B	0.732625	6.547949e-19	1.134563e-14	4.538252e-16
26	8148850	7994052	NM_006043	HS3ST2	0.732603	6.571038e-19	1.138564e-14	4.379091e-16
27	8148850	7910706	NM_006499	LGALS8	-0.731179	8.296757e-19	1.437579e-14	5.324367e-16
28	8148850	8064242	NR_027686	NCRNA00176	0.731084	8.426447e-19	1.460051e-14	5.214466e-16
29	8148850	8079021	NM_001904	CTNNB1	-0.730664	9.023074e-19	1.563428e-14	5.391131e-16
30	8148850	7949645	NM_207340	ZDHHC24	0.730247	9.655542e-19	1.673016e-14	5.576719e-16
31	8148850	8024995	NM_004558	NRTN	0.729435	1.101429e-18	1.908446e-14	6.156277e-16
32	8148850	8110382	NM_030567	PRR7	0.729204	1.143336e-18	1.981058e-14	6.190806e-16
33	8148850	7949344	NM_005468	NAALADL1	0.728682	1.243972e-18	2.155430e-14	6.531605e-16
34	8148850	7998679	NM_178167	ZNF598	0.728682	1.244044e-18	2.155556e-14	6.339870e-16
35	8148850	8006562	NM_033315	RASL10B	0.728264	1.330625e-18	2.305574e-14	6.587356e-16
36	8148850	8054092	NM_015348	TMEM131	-0.728240	1.335889e-18	2.314695e-14	6.429709e-16
37	8148850	7949857	NM_181843	NUDT8	0.728137	1.358157e-18	2.353279e-14	6.360214e-16
38	8148850	7976783	NM_003836	DLK1	0.727941	1.401833e-18	2.428956e-14	6.391990e-16
39	8148850	8042144	NM_002908	REL	-0.727705	1.456001e-18	2.522812e-14	6.468750e-16
40	8148850	7977432	NM_025268	TMEM121	0.726606	1.736399e-18	3.008659e-14	7.521648e-16
41	8148850	8027556	NM_002333	LRP3	0.726143	1.869682e-18	3.239598e-14	7.901458e-16
42	8148850	8033455	ENST00000327607		0.725923	1.936244e-18	3.354930e-14	7.987930e-16
43	8148850	8138757	NM_018951	HOXA10	0.725644	2.024266e-18	3.507446e-14	8.156851e-16
44	8148850	8032699	NM_015174	ZFR2	0.725201	2.172159e-18	3.763700e-14	8.553864e-16
45	8148850	7898431	NM_016233	PADI3	0.724959	2.257373e-18	3.911350e-14	8.691888e-16
46	8148850	7967969	NM_138284	IL17D	0.724449	2.447371e-18	4.240559e-14	9.218607e-16
47	8148850	7992463	NM_001130012	SLC9A3R2	0.722940	3.105718e-18	5.381278e-14	1.144953e-15
48	8148850	8052024	NM_025133	FBXO11	-0.722189	3.494552e-18	6.055011e-14	1.261461e-15
49	8148850	7911683	NM_182533	C1orf86	0.721637	3.809973e-18	6.601541e-14	1.347253e-15
50	8148850	7911376	NM_001142467	HES4	0.721498	3.893583e-18	6.746410e-14	1.349282e-15

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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	with keyword:
	KEGG Pathway:
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Remove	"self correlations", i.e. correlations of a variable with itself
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