[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 3 variables:
id Label1 AccNum GeneSym Info Gene Name
6812 8179648 NM_005275 GNL1 link to infopage guanine nucleotide binding protein-like 1
7277 8124742 NM_005275 GNL1 link to infopage guanine nucleotide binding protein-like 1
7575 8178346 NM_005275 GNL1 link to infopage guanine nucleotide binding protein-like 1

Fetching correlation data, please wait...
Getting list of correlations for id 6812.
Getting list of p-values for id 6812.
1 of 3 done.
Getting list of correlations for id 7277.
Getting list of p-values for id 7277.
2 of 3 done.
Getting list of correlations for id 7575.
Getting list of p-values for id 7575.
3 of 3 done.
Calculating corrections for multiple testing (n=51981), please wait...
Done; whole program took 0.374 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8124742 8178346 NM_005275 GNL1 link to infopage 0.957714 1.538484e-57 7.997194e-53 7.997194e-53
2 8178346 8124742 NM_005275 GNL1 link to infopage 0.957714 1.538484e-57 7.997194e-53 3.998597e-53
3 8178346 8179648 NM_005275 GNL1 link to infopage 0.932348 2.613424e-47 1.358484e-42 4.528280e-43
4 8179648 8178346 NM_005275 GNL1 link to infopage 0.932348 2.613424e-47 1.358484e-42 3.396210e-43
5 8179648 8124742 NM_005275 GNL1 link to infopage 0.932335 2.638481e-47 1.371509e-42 2.743017e-43
6 8124742 8179648 NM_005275 GNL1 link to infopage 0.932335 2.638481e-47 1.371509e-42 2.285848e-43
7 8178346 8102751 NM_144643 SCLT1 link to infopage -0.651264 5.387680e-14 2.800570e-9 4.000814e-10
8 8178346 8082788 NM_001134422 CDV3 link to infopage -0.649084 6.959834e-14 3.617791e-9 4.522239e-10
9 8178346 7957806 NM_017988 SCYL2 link to infopage -0.644611 1.169549e-13 6.079431e-9 6.754923e-10
10 8179648 8084219 NM_017644 KLHL24 link to infopage -0.643186 1.377383e-13 7.159772e-9 7.159772e-10
11 8178346 8052024 NM_025133 FBXO11 link to infopage -0.641010 1.765286e-13 9.176133e-9 8.341939e-10
12 8178346 8162833 NM_015051 ERP44 link to infopage -0.638413 2.367613e-13 1.230709e-8 1.025591e-9
13 8178346 8084219 NM_017644 KLHL24 link to infopage -0.637735 2.554884e-13 1.328054e-8 1.021580e-9
14 8179648 8102751 NM_144643 SCLT1 link to infopage -0.637252 2.697192e-13 1.402028e-8 1.001448e-9
15 8178346 8101228 NM_144571 CNOT6L link to infopage -0.636764 2.848558e-13 1.480709e-8 9.871393e-10
16 8179648 8025328 NM_001159944 EVI5L link to infopage 0.635629 3.233355e-13 1.680730e-8 1.050457e-9
17 8179648 7939620 NM_152312 GYLTL1B link to infopage 0.633796 3.962767e-13 2.059886e-8 1.211698e-9
18 8178346 8030321 NM_153329 ALDH16A1 link to infopage 0.633750 3.982958e-13 2.070381e-8 1.150212e-9
19 8178346 8104944 NM_015384 NIPBL link to infopage -0.633294 4.188603e-13 2.177278e-8 1.145936e-9
20 8179648 8042119 NM_022894 PAPOLG link to infopage -0.632089 4.783507e-13 2.486515e-8 1.243257e-9
21 8179648 8156295 NM_024077 SECISBP2 link to infopage -0.631095 5.334900e-13 2.773134e-8 1.320540e-9
22 8178346 7930454 NM_145341 PDCD4 link to infopage -0.630720 5.557978e-13 2.889092e-8 1.313224e-9
23 8179648 8177011 NM_004192 ASMTL link to infopage 0.630369 5.775789e-13 3.002313e-8 1.305353e-9
24 8179648 8001748 NR_002980 SNORA50 link to infopage -0.629407 6.414811e-13 3.334483e-8 1.389368e-9
25 8179648 7965359 NM_001001323 ATP2B1 link to infopage -0.629318 6.477293e-13 3.366961e-8 1.346785e-9
26 8179648 8052024 NM_025133 FBXO11 link to infopage -0.627794 7.642398e-13 3.972595e-8 1.527921e-9
27 8124742 7957806 NM_017988 SCYL2 link to infopage -0.625781 9.495605e-13 4.935910e-8 1.828115e-9
28 8178346 8045381 NM_058241 CCNT2 link to infopage -0.625747 9.530430e-13 4.954013e-8 1.769290e-9
29 8178346 8001748 NR_002980 SNORA50 link to infopage -0.623909 1.160402e-12 6.031887e-8 2.079961e-9
30 8178346 8042119 NM_022894 PAPOLG link to infopage -0.623882 1.163664e-12 6.048841e-8 2.016280e-9
31 8178346 8113469 NM_014819 PJA2 link to infopage -0.623029 1.274475e-12 6.624850e-8 2.137048e-9
32 8124742 8102751 NM_144643 SCLT1 link to infopage -0.622244 1.385296e-12 7.200907e-8 2.250283e-9
33 8179648 8171119 NM_004192 ASMTL link to infopage 0.621693 1.468600e-12 7.633927e-8 2.313311e-9
34 8178346 8177011 NM_004192 ASMTL link to infopage 0.621330 1.526227e-12 7.933479e-8 2.333376e-9
35 8124742 8082788 NM_001134422 CDV3 link to infopage -0.618986 1.953522e-12 1.015460e-7 2.901315e-9
36 8124742 8084219 NM_017644 KLHL24 link to infopage -0.617477 2.287591e-12 1.189113e-7 3.303091e-9
37 8178346 7965359 NM_001001323 ATP2B1 link to infopage -0.617138 2.370082e-12 1.231992e-7 3.329709e-9
38 8178346 8156295 NM_024077 SECISBP2 link to infopage -0.616409 2.556752e-12 1.329025e-7 3.497435e-9
39 8178346 8092933 NM_012287 ACAP2 link to infopage -0.616021 2.662048e-12 1.383759e-7 3.548100e-9
40 8178346 7917240 NM_004388 CTBS link to infopage -0.615719 2.746707e-12 1.427766e-7 3.569415e-9
41 8179648 8162833 NM_015051 ERP44 link to infopage -0.615622 2.774571e-12 1.442250e-7 3.517682e-9
42 8178346 7897714 NM_001014765 FBXO44 link to infopage 0.614703 3.051427e-12 1.586162e-7 3.776577e-9
43 8178346 8151149 NM_006421 ARFGEF1 link to infopage -0.614405 3.146479e-12 1.635571e-7 3.803654e-9
44 8124742 7930454 NM_145341 PDCD4 link to infopage -0.613322 3.517859e-12 1.828618e-7 4.155950e-9
45 8124742 8162833 NM_015051 ERP44 link to infopage -0.612992 3.639482e-12 1.891839e-7 4.204087e-9
46 8179648 8082788 NM_001134422 CDV3 link to infopage -0.612887 3.678631e-12 1.912189e-7 4.156933e-9
47 8124742 7965359 NM_001001323 ATP2B1 link to infopage -0.612836 3.698226e-12 1.922375e-7 4.090159e-9
48 8178346 8021113 NM_145055 C18orf25 link to infopage -0.612487 3.832764e-12 1.992309e-7 4.150644e-9
49 8178346 8105191 NM_024615 PARP8 link to infopage -0.612335 3.893195e-12 2.023721e-7 4.130044e-9
50 8179648 7922823 NM_025191 EDEM3 link to infopage -0.611488 4.245434e-12 2.206819e-7 4.413638e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!