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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 5 variables:
id Label1 AccNum GeneSym Info Gene Name
14628 8154363 NM_001029 RPS26 link to infopage ribosomal protein S26
16115 7956114 NM_001029 RPS26 link to infopage ribosomal protein S26
16293 8102410 NM_001029 RPS26 link to infopage ribosomal protein S26
16453 7972577 NM_001029 RPS26 link to infopage ribosomal protein S26
16663 8007797 NM_001029 RPS26 link to infopage ribosomal protein S26

Fetching correlation data, please wait...
Getting list of correlations for id 14628.
Getting list of p-values for id 14628.
1 of 5 done.
Getting list of correlations for id 16115.
Getting list of p-values for id 16115.
2 of 5 done.
Getting list of correlations for id 16293.
Getting list of p-values for id 16293.
3 of 5 done.
Getting list of correlations for id 16453.
Getting list of p-values for id 16453.
4 of 5 done.
Getting list of correlations for id 16663.
Getting list of p-values for id 16663.
5 of 5 done.
Calculating corrections for multiple testing (n=86635), please wait...
Done; whole program took 0.346 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7972577 8102410 NM_001029 RPS26 link to infopage 0.991869 4.819127e-94 4.175050e-89 4.175050e-89
2 8102410 7972577 NM_001029 RPS26 link to infopage 0.991869 4.819127e-94 4.175050e-89 2.087525e-89
3 7956114 8102410 NM_001029 RPS26 link to infopage 0.987163 6.984302e-84 6.050850e-79 2.016950e-79
4 8102410 7956114 NM_001029 RPS26 link to infopage 0.987163 6.984302e-84 6.050850e-79 1.512713e-79
5 7956114 7972577 NM_001029 RPS26 link to infopage 0.980713 7.585180e-75 6.571421e-70 1.314284e-70
6 7972577 7956114 NM_001029 RPS26 link to infopage 0.980713 7.585180e-75 6.571421e-70 1.095237e-70
7 8007797 8160557 ENST00000440331 link to infopage 0.979425 2.053978e-73 1.779464e-68 2.542091e-69
8 8007797 7916564 ENST00000413275 link to infopage 0.968962 2.474473e-64 2.143760e-59 2.679700e-60
9 8007797 7972577 NM_001029 RPS26 link to infopage 0.968174 8.828609e-64 7.648666e-59 8.498518e-60
10 7972577 8007797 NM_001029 RPS26 link to infopage 0.968174 8.828609e-64 7.648666e-59 7.648666e-60
11 8154363 8007797 NM_001029 RPS26 link to infopage 0.952521 5.254960e-55 4.552635e-50 4.138759e-51
12 8007797 8154363 NM_001029 RPS26 link to infopage 0.952521 5.254960e-55 4.552635e-50 3.793862e-51
13 7972577 7916564 ENST00000413275 link to infopage 0.946682 1.780673e-52 1.542686e-47 1.186681e-48
14 7972577 8160557 ENST00000440331 link to infopage 0.944851 9.668937e-52 8.376683e-47 5.983345e-48
15 8154363 7972577 NM_001029 RPS26 link to infopage 0.944825 9.903705e-52 8.580075e-47 5.720050e-48
16 7972577 8154363 NM_001029 RPS26 link to infopage 0.944825 9.903705e-52 8.580075e-47 5.362547e-48
17 8007797 8102410 NM_001029 RPS26 link to infopage 0.943223 4.150021e-51 3.595370e-46 2.114924e-47
18 8102410 8007797 NM_001029 RPS26 link to infopage 0.943223 4.150021e-51 3.595370e-46 1.997428e-47
19 8007797 8171846 ENST00000419089 link to infopage 0.937391 5.501355e-49 4.766099e-44 2.508473e-45
20 8154363 7916564 ENST00000413275 link to infopage 0.936462 1.147119e-48 9.938064e-44 4.969032e-45
21 8154363 8160557 ENST00000440331 link to infopage 0.935658 2.147914e-48 1.860846e-43 8.861170e-45
22 8154363 8102410 NM_001029 RPS26 link to infopage 0.933765 9.109828e-48 7.892300e-43 3.587409e-44
23 8102410 8154363 NM_001029 RPS26 link to infopage 0.933765 9.109828e-48 7.892300e-43 3.431435e-44
24 7956114 8168357 NR_002309 RPS26P11 link to infopage 0.932423 2.472322e-47 2.141896e-42 8.924567e-44
25 8007797 8138545 ENST00000447425 link to infopage 0.918233 3.147362e-43 2.726717e-38 1.090687e-39
26 8102410 7916564 ENST00000413275 link to infopage 0.915763 1.367228e-42 1.184498e-37 4.555760e-39
27 7956114 8007797 NM_001029 RPS26 link to infopage 0.914677 2.571954e-42 2.228212e-37 8.252637e-39
28 8007797 7956114 NM_001029 RPS26 link to infopage 0.914677 2.571954e-42 2.228212e-37 7.957900e-39
29 8102410 8160557 ENST00000440331 link to infopage 0.911782 1.330797e-41 1.152936e-36 3.975642e-38
30 8154363 8171846 ENST00000419089 link to infopage 0.909342 5.092291e-41 4.411707e-36 1.470569e-37
31 8102410 8168357 NR_002309 RPS26P11 link to infopage 0.908749 7.012594e-41 6.075361e-36 1.959794e-37
32 8154363 7956114 NM_001029 RPS26 link to infopage 0.902870 1.500362e-39 1.299838e-34 4.061995e-36
33 7956114 8154363 NM_001029 RPS26 link to infopage 0.902870 1.500362e-39 1.299838e-34 3.938904e-36
34 8154363 8138545 ENST00000447425 link to infopage 0.899999 6.239940e-39 5.405972e-34 1.589992e-35
35 7972577 8171846 ENST00000419089 link to infopage 0.898857 1.087189e-38 9.418862e-34 2.691103e-35
36 7972577 8168357 NR_002309 RPS26P11 link to infopage 0.891957 2.717601e-37 2.354393e-32 6.539982e-34
37 7956114 7916564 ENST00000413275 link to infopage 0.890413 5.420612e-37 4.696147e-32 1.269229e-33
38 7972577 8138545 ENST00000447425 link to infopage 0.886400 3.110023e-36 2.694369e-31 7.090444e-33
39 7956114 8160557 ENST00000440331 link to infopage 0.877878 1.031723e-34 8.938329e-30 2.291879e-31
40 8102410 8171846 ENST00000419089 link to infopage 0.872608 7.910424e-34 6.853196e-29 1.713299e-30
41 8102410 8138545 ENST00000447425 link to infopage 0.859761 7.932323e-32 6.872168e-27 1.676138e-28
42 7956114 8171846 ENST00000419089 link to infopage 0.838758 5.988311e-29 5.187974e-24 1.235232e-25
43 7956114 8138545 ENST00000447425 link to infopage 0.837767 7.994015e-29 6.925615e-24 1.610608e-25
44 8154363 8168357 NR_002309 RPS26P11 link to infopage 0.803694 5.828486e-25 5.049508e-20 1.147616e-21
45 8007797 8168357 NR_002309 RPS26P11 link to infopage 0.785519 3.382349e-23 2.930298e-18 6.511774e-20
46 8007797 7936833 ENST00000421948 link to infopage 0.775631 2.620198e-22 2.270009e-17 4.934801e-19
47 8154363 7936833 ENST00000421948 link to infopage 0.753578 1.769586e-20 1.533081e-15 3.261874e-17
48 7972577 7936833 ENST00000421948 link to infopage 0.718006 6.693137e-18 5.798599e-13 1.208041e-14
49 8102410 7936833 ENST00000421948 link to infopage 0.697481 1.381580e-16 1.196932e-11 2.442718e-13
50 7956114 7936833 ENST00000421948 link to infopage 0.658010 2.406528e-14 2.084896e-9 4.169791e-11

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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