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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4720	204159_at	NM_001262	CDKN2C		cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
8237	211792_s_at	U17074	CDKN2C		cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)

Fetching correlation data, please wait...
Getting list of correlations for id 4720.
Getting list of p-values for id 4720.
1 of 2 done.
Getting list of correlations for id 8237.
Getting list of p-values for id 8237.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.219 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204159_at	212205_at	AA534860	H2AFV	0.747944	2.957184e-16	1.367224e-11	1.367224e-11
2	204159_at	204172_at	NM_000097	CPOX	0.746982	3.383836e-16	1.564483e-11	7.822415e-12
3	211792_s_at	201476_s_at	AI692974	RRM1	0.742126	6.623160e-16	3.062152e-11	1.020717e-11
4	204159_at	224892_at	BF680495	PLDN	0.740834	7.899058e-16	3.652051e-11	9.130126e-12
5	211792_s_at	1555814_a_at	AF498970	RHOA	0.740639	8.110946e-16	3.750015e-11	7.500029e-12
6	211792_s_at	1554577_a_at	AY057056	PSMD10	0.739697	9.215446e-16	4.260669e-11	7.101115e-12
7	211792_s_at	201311_s_at	AL515318	SH3BGRL	0.726176	5.432406e-15	2.511619e-10	3.588027e-11
8	204159_at	200037_s_at	NM_016587	CBX3	0.724951	6.346220e-15	2.934111e-10	3.667639e-11
9	204159_at	200934_at	NM_003472	DEK	0.724486	6.730803e-15	3.111919e-10	3.457688e-11
10	204159_at	231038_s_at	AI309438		0.722271	8.892958e-15	4.111570e-10	4.111570e-11
11	204159_at	221478_at	AL132665	BNIP3L	0.721594	9.677711e-15	4.474393e-10	4.067630e-11
12	204159_at	226283_at	BF131947	POC1B	0.720485	1.110952e-14	5.136377e-10	4.280315e-11
13	204159_at	217880_at	N21397	CDC27	0.720435	1.117963e-14	5.168792e-10	3.975994e-11
14	211792_s_at	201946_s_at	AL545982	CCT2	0.719536	1.249672e-14	5.777734e-10	4.126953e-11
15	211792_s_at	1555797_a_at	AF017807	ARPC5	0.717057	1.695179e-14	7.837491e-10	5.224994e-11
16	211792_s_at	201386_s_at	AF279891	DHX15	0.714679	2.264522e-14	1.046979e-9	6.543618e-11
17	211792_s_at	200712_s_at	AI633566	MAPRE1	0.714415	2.337950e-14	1.080928e-9	6.358398e-11
18	211792_s_at	200806_s_at	BE256479	HSPD1	0.713770	2.527547e-14	1.168586e-9	6.492146e-11
19	211792_s_at	201835_s_at	NM_006253	PRKAB1	0.710838	3.592352e-14	1.660888e-9	8.741517e-11
20	211792_s_at	211080_s_at	Z25425	NEK2	0.710835	3.593448e-14	1.661395e-9	8.306973e-11
21	204159_at	202460_s_at	NM_014646	LPIN2	0.710175	3.887249e-14	1.797231e-9	8.558241e-11
22	211792_s_at	202593_s_at	NM_016641	GDE1	0.708355	4.821830e-14	2.229325e-9	1.013329e-10
23	204159_at	202666_s_at	NM_004301	ACTL6A	0.706167	6.234043e-14	2.882248e-9	1.253151e-10
24	204159_at	219493_at	NM_024745	SHCBP1	0.705909	6.424462e-14	2.970286e-9	1.237619e-10
25	204159_at	226811_at	AL046017	FAM46C	0.704817	7.295875e-14	3.373175e-9	1.349270e-10
26	211792_s_at	1555467_a_at	AF267533	CELF1	0.704672	7.420028e-14	3.430576e-9	1.319452e-10
27	204159_at	217125_at	X04802		0.701827	1.030481e-13	4.764325e-9	1.764565e-10
28	204159_at	223338_s_at	BC001867	ATPIF1	0.701393	1.083078e-13	5.007505e-9	1.788395e-10
29	211792_s_at	214882_s_at	BG254869	SRSF2	0.699268	1.380205e-13	6.381239e-9	2.200427e-10
30	204159_at	212989_at	AI377497	SGMS1	0.698141	1.568072e-13	7.249825e-9	2.416608e-10
31	204159_at	235759_at	AI095542		0.697350	1.714626e-13	7.927404e-9	2.557227e-10
32	204159_at	222848_at	BC005400	CENPK	0.697261	1.731859e-13	8.007077e-9	2.502212e-10
33	204159_at	223669_at	AF130060	HEMGN	0.696976	1.788365e-13	8.268325e-9	2.505553e-10
34	204159_at	219787_s_at	NM_018098	ECT2	0.696049	1.984460e-13	9.174951e-9	2.698515e-10
35	204159_at	237515_at	AA054642	TMEM56	0.695840	2.031480e-13	9.392346e-9	2.683527e-10
36	204159_at	210907_s_at	BC002506	PDCD10	0.693913	2.518615e-13	1.164457e-8	3.234602e-10
37	204159_at	217144_at	X04801	UBB	0.693412	2.662661e-13	1.231055e-8	3.327175e-10
38	204159_at	240781_x_at	H18004		0.693234	2.715895e-13	1.255667e-8	3.304387e-10
39	204159_at	222297_x_at	AV738806	RPL18	0.692378	2.985503e-13	1.380317e-8	3.539275e-10
40	211792_s_at	200828_s_at	BE871379	ZNF207	0.691565	3.265500e-13	1.509771e-8	3.774428e-10
41	204159_at	212648_at	AL079292	DHX29	0.691546	3.272352e-13	1.512939e-8	3.690096e-10
42	211792_s_at	1554768_a_at	AF394735	MAD2L1	0.688692	4.471827e-13	2.067504e-8	4.922629e-10
43	211792_s_at	209772_s_at	X69397	CD24	0.687359	5.167678e-13	2.389224e-8	5.556336e-10
44	211792_s_at	212162_at	AK022873	KIDINS220	0.687050	5.343550e-13	2.470537e-8	5.614856e-10
45	211792_s_at	202899_s_at	NM_003017	SRSF3	0.685446	6.351650e-13	2.936622e-8	6.525826e-10
46	204159_at	227309_at	AI982535	YOD1	0.685261	6.479164e-13	2.995577e-8	6.512124e-10
47	211792_s_at	1557910_at	BG612458	HSP90AB1	0.684997	6.665232e-13	3.081604e-8	6.556603e-10
48	211792_s_at	1555278_a_at	BC035554	CKAP5	0.682373	8.817916e-13	4.076875e-8	8.493490e-10
49	204159_at	208738_x_at	AK024823		0.681493	9.679803e-13	4.475360e-8	9.133388e-10
50	211792_s_at	201120_s_at	AL547946	PGRMC1	0.681446	9.727538e-13	4.497430e-8	8.994860e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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