[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
6533	208682_s_at	AF126181	MAGED2		melanoma antigen family D, 2
9636	213627_at	AI924630	MAGED2		melanoma antigen family D, 2

Fetching correlation data, please wait...
Getting list of correlations for id 6533.
Getting list of p-values for id 6533.
1 of 2 done.
Getting list of correlations for id 9636.
Getting list of p-values for id 9636.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.217 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	213627_at	212465_at	AA524500	SETD3	0.759438	5.625611e-17	2.600945e-12	2.600945e-12
2	213627_at	211964_at	X05610	COL4A2	0.740703	8.041163e-16	3.717751e-11	1.858876e-11
3	213627_at	212062_at	AB014511	ATP9A	0.739965	8.887238e-16	4.108926e-11	1.369642e-11
4	213627_at	226656_at	AW024741	CRTAP	0.733746	2.038815e-15	9.426258e-11	2.356564e-11
5	213627_at	205353_s_at	NM_002567	PEBP1	0.728348	4.114590e-15	1.902340e-10	3.804679e-11
6	213627_at	217722_s_at	NM_016645	NGRN	0.706371	6.086999e-14	2.814263e-9	4.690439e-10
7	213627_at	201032_at	NM_006698	BLCAP	0.698077	1.579526e-13	7.302781e-9	1.043254e-9
8	213627_at	208873_s_at	BC000232	REEP5	0.697708	1.646783e-13	7.613737e-9	9.517172e-10
9	208682_s_at	201666_at	NM_003254	TIMP1	0.695670	2.070480e-13	9.572657e-9	1.063629e-9
10	213627_at	221656_s_at	BC003073	ARHGEF10L	0.692795	2.851163e-13	1.318207e-8	1.318207e-9
11	213627_at	212904_at	AB033011	LRRC47	0.692435	2.966943e-13	1.371737e-8	1.247033e-9
12	213627_at	202071_at	NM_002999	SDC4	0.688337	4.647798e-13	2.148863e-8	1.790719e-9
13	213627_at	201080_at	BF338509	PIP4K2B	0.686250	5.825274e-13	2.693257e-8	2.071736e-9
14	213627_at	243_g_at	M64571	MAP4	0.685728	6.162022e-13	2.848949e-8	2.034964e-9
15	213627_at	201135_at	NM_004092	ECHS1	0.685726	6.163295e-13	2.849538e-8	1.899692e-9
16	213627_at	227792_at	AA490685	ITPRIPL2	0.674684	1.969695e-12	9.106688e-8	5.691680e-9
17	213627_at	202336_s_at	NM_000919	PAM	0.671013	2.866792e-12	1.325433e-7	7.796663e-9
18	213627_at	212771_at	AU150943	FAM171A1	0.670478	3.026430e-12	1.399240e-7	7.773554e-9
19	213627_at	225030_at	AA824341	BOD1	0.669814	3.236886e-12	1.496542e-7	7.876537e-9
20	213627_at	205730_s_at	NM_014945	ABLIM3	0.668076	3.855884e-12	1.782729e-7	8.913647e-9
21	213627_at	217226_s_at	M95929	SFXN3	0.665608	4.933655e-12	2.281026e-7	1.086203e-8
22	213627_at	213428_s_at	AA292373	COL6A1	0.660875	7.865477e-12	3.636525e-7	1.652966e-8
23	213627_at	212775_at	AI978623	OBSL1	0.660417	8.224743e-12	3.802628e-7	1.653316e-8
24	213627_at	221255_s_at	NM_031298	TMEM93	0.659269	9.196166e-12	4.251755e-7	1.771565e-8
25	213627_at	225525_at	AB051458	KIAA1671	0.658194	1.020613e-11	4.718702e-7	1.887481e-8
26	213627_at	210825_s_at	AF130103	PEBP1	0.657500	1.091348e-11	5.045738e-7	1.940668e-8
27	213627_at	204359_at	NM_013231	FLRT2	0.655701	1.297179e-11	5.997377e-7	2.221251e-8
28	213627_at	211984_at	AI653730	CALM1	0.654841	1.408383e-11	6.511517e-7	2.325542e-8
29	213627_at	224995_at	AJ277587	SPIRE1	0.654218	1.494667e-11	6.910445e-7	2.382912e-8
30	213627_at	218175_at	NM_025140	CCDC92	0.652836	1.704280e-11	7.879569e-7	2.626523e-8
31	213627_at	212647_at	NM_006270	RRAS	0.648217	2.630084e-11	1.215993e-6	3.922559e-8
32	213627_at	200788_s_at	NM_003768	PEA15	0.646622	3.049941e-11	1.410110e-6	4.406593e-8
33	213627_at	225480_at	BE408081	C1orf122	0.645507	3.380929e-11	1.563139e-6	4.736783e-8
34	213627_at	203657_s_at	NM_003793	CTSF	0.643174	4.188560e-11	1.936539e-6	5.695702e-8
35	213627_at	222021_x_at	AI348006	SDHAP1	0.642921	4.286527e-11	1.981833e-6	5.662379e-8
36	213627_at	202598_at	NM_005979	S100A13	0.641265	4.984159e-11	2.304376e-6	6.401044e-8
37	208682_s_at	209156_s_at	AY029208	COL6A2	0.639942	5.618791e-11	2.597792e-6	7.021059e-8
38	213627_at	204589_at	NM_014840	NUAK1	0.639632	5.778039e-11	2.671419e-6	7.030049e-8
39	213627_at	201681_s_at	AB011155	DLG5	0.639335	5.935185e-11	2.744073e-6	7.036085e-8
40	213627_at	222116_s_at	AL157485	TBC1D16	0.638725	6.270370e-11	2.899043e-6	7.247607e-8
41	213627_at	224616_at	BG110975	DYNC1LI2	0.637822	6.799806e-11	3.143822e-6	7.667859e-8
42	208682_s_at	202598_at	NM_005979	S100A13	0.636665	7.541866e-11	3.486906e-6	8.302158e-8
43	213627_at	241793_at	BE674227	ZMYND17	0.632741	1.067929e-10	4.937465e-6	1.148248e-7
44	213627_at	226518_at	AW073741	KCTD10	0.632527	1.088182e-10	5.031098e-6	1.143431e-7
45	213627_at	201655_s_at	M85289	HSPG2	0.631600	1.180521e-10	5.458022e-6	1.212894e-7
46	213627_at	209550_at	U35139	NDN	0.630977	1.246685e-10	5.763924e-6	1.253027e-7
47	208682_s_at	201268_at	NM_002512		0.630709	1.276203e-10	5.900396e-6	1.255403e-7
48	213627_at	234312_s_at	AK000162	ACSS2	0.630263	1.326933e-10	6.134942e-6	1.278113e-7
49	213627_at	202371_at	NM_024863	TCEAL4	0.629669	1.397362e-10	6.460563e-6	1.318482e-7
50	213627_at	202801_at	NM_002730	PRKACA	0.628416	1.558034e-10	7.203416e-6	1.440683e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation