[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
4479	203818_s_at	NM_006802	SF3A3		splicing factor 3a, subunit 3, 60kDa

Fetching correlation data, please wait...
Getting list of correlations for id 4479.
Getting list of p-values for id 4479.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.157 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	203818_s_at	213043_s_at	AI023317	MED24	0.766039	2.078633e-17	4.805176e-13	4.805176e-13
2	203818_s_at	48531_at	AA522816	TNIP2	0.754709	1.125832e-16	2.602585e-12	1.301293e-12
3	203818_s_at	225196_s_at	AF308301	MRPS26	0.746746	3.497582e-16	8.085361e-12	2.695120e-12
4	203818_s_at	223033_s_at	AF297709	SCYL1	0.746487	3.626074e-16	8.382395e-12	2.095599e-12
5	203818_s_at	203262_s_at	NM_004699	FAM50A	0.739929	8.931502e-16	2.064695e-11	4.129390e-12
6	203818_s_at	202256_at	BF793888	CD2BP2	0.739460	9.515390e-16	2.199673e-11	3.666121e-12
7	203818_s_at	226241_s_at	BG497211	MRPL52	0.737240	1.282485e-15	2.964721e-11	4.235315e-12
8	203818_s_at	213097_s_at	AI338837	DNAJC2	0.734126	1.939289e-15	4.483055e-11	5.603819e-12
9	203818_s_at	224611_s_at	AL118506	DNAJC5	0.732502	2.400685e-15	5.549664e-11	6.166294e-12
10	203818_s_at	202337_at	NM_007221	PMF1	0.731575	2.709638e-15	6.263870e-11	6.263870e-12
11	203818_s_at	224695_at	AK024221	C2orf29	0.728713	3.925572e-15	9.074744e-11	8.249767e-12
12	203818_s_at	204022_at	AI668780	WWP2	0.726634	5.124137e-15	1.184547e-10	9.871224e-12
13	203818_s_at	201948_at	NM_013285	GNL2	0.721502	9.788950e-15	2.262911e-10	1.740701e-11
14	203818_s_at	202417_at	NM_012289	KEAP1	0.721149	1.022978e-14	2.364819e-10	1.689156e-11
15	203818_s_at	44654_at	AI669655	G6PC3	0.719138	1.312621e-14	3.034385e-10	2.022923e-11
16	203818_s_at	206016_at	NM_014008	CCDC22	0.714331	2.361779e-14	5.459724e-10	3.412327e-11
17	203818_s_at	200051_at	NM_005146	SART1	0.714201	2.399204e-14	5.546241e-10	3.262494e-11
18	203818_s_at	208880_s_at	AB019219	PRPF6	0.712150	3.071149e-14	7.099576e-10	3.944209e-11
19	203818_s_at	218682_s_at	NM_018158	SLC4A1AP	0.711156	3.458706e-14	7.995492e-10	4.208154e-11
20	203818_s_at	226915_s_at	AU158936	ARPC5L	0.709644	4.140013e-14	9.570469e-10	4.785235e-11
21	203818_s_at	209431_s_at	AF254083	PATZ1	0.709442	4.240294e-14	9.802288e-10	4.667756e-11
22	203818_s_at	218840_s_at	NM_018161	NADSYN1	0.708453	4.766107e-14	1.101781e-9	5.008096e-11
23	203818_s_at	202161_at	NM_002741	PKN1	0.707377	5.410004e-14	1.250631e-9	5.437524e-11
24	203818_s_at	215004_s_at	AC004475	SUGP1	0.705300	6.897195e-14	1.594425e-9	6.643436e-11
25	203818_s_at	224504_s_at	BC006350	BUD13	0.704961	7.174307e-14	1.658484e-9	6.633938e-11
26	203818_s_at	228521_s_at	AW242973	RAB4B	0.704683	7.410233e-14	1.713024e-9	6.588552e-11
27	203818_s_at	200792_at	NM_001469	XRCC6	0.704086	7.941690e-14	1.835880e-9	6.799557e-11
28	203818_s_at	226385_s_at	BG397444	C7orf30	0.704021	8.001542e-14	1.849717e-9	6.606130e-11
29	203818_s_at	202093_s_at	NM_019088	PAF1	0.703493	8.505805e-14	1.966287e-9	6.780300e-11
30	203818_s_at	224298_s_at	BC004528	UBAC2	0.702973	9.031404e-14	2.087790e-9	6.959299e-11
31	203818_s_at	221893_s_at	N32831	ADCK2	0.702466	9.574976e-14	2.213447e-9	7.140153e-11
32	203818_s_at	202215_s_at	NM_014223	NFYC	0.701853	1.027401e-13	2.375044e-9	7.422011e-11
33	203818_s_at	213671_s_at	AA621558	MARS	0.701759	1.038497e-13	2.400695e-9	7.274832e-11
34	203818_s_at	213379_at	AF091086	COQ2	0.700116	1.253224e-13	2.897077e-9	8.520816e-11
35	203818_s_at	232510_s_at	AW250952	DPP3	0.699686	1.316148e-13	3.042538e-9	8.692967e-11
36	203818_s_at	46323_at	AL120741	CANT1	0.698975	1.426829e-13	3.298401e-9	9.162224e-11
37	203818_s_at	218282_at	NM_018217	EDEM2	0.698748	1.464022e-13	3.384381e-9	9.146975e-11
38	203818_s_at	225648_at	AA001414	STK35	0.696987	1.786116e-13	4.128965e-9	1.086570e-10
39	203818_s_at	55662_at	H27225	C10orf76	0.696575	1.870723e-13	4.324550e-9	1.108859e-10
40	203818_s_at	209609_s_at	BC004517	MRPL9	0.695958	2.004747e-13	4.634373e-9	1.158593e-10
41	203818_s_at	218586_at	NM_018270	C20orf20	0.695917	2.014053e-13	4.655886e-9	1.135582e-10
42	203818_s_at	210574_s_at	AF241788	NUDC	0.694332	2.403914e-13	5.557128e-9	1.323126e-10
43	203818_s_at	204608_at	NM_000048	ASL	0.693829	2.542302e-13	5.877039e-9	1.366753e-10
44	203818_s_at	202681_at	AI346043	USP4	0.692820	2.843034e-13	6.572241e-9	1.493691e-10
45	203818_s_at	212895_s_at	AL527773	ABR	0.692546	2.930750e-13	6.775014e-9	1.505559e-10
46	203818_s_at	209667_at	BF033242	CES2	0.692331	3.001194e-13	6.937860e-9	1.508230e-10
47	203818_s_at	218993_at	NM_018146	RNMTL1	0.691302	3.361195e-13	7.770074e-9	1.653207e-10
48	203818_s_at	1554503_a_at	BC035023	OSCAR	0.690934	3.500240e-13	8.091505e-9	1.685730e-10
49	203818_s_at	202180_s_at	NM_017458	MVP	0.690672	3.601962e-13	8.326655e-9	1.699317e-10
50	203818_s_at	212861_at	BF690150	MFSD5	0.690127	3.823853e-13	8.839601e-9	1.767920e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation