[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 3 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4669	204084_s_at	AI911687	CLN5		ceroid-lipofuscinosis, neuronal 5
4670	204085_s_at	NM_006493	CLN5		ceroid-lipofuscinosis, neuronal 5
9948	214252_s_at	AV700514	CLN5		ceroid-lipofuscinosis, neuronal 5

Fetching correlation data, please wait...
Getting list of correlations for id 4669.
Getting list of p-values for id 4669.
1 of 3 done.
Getting list of correlations for id 4670.
Getting list of p-values for id 4670.
2 of 3 done.
Getting list of correlations for id 9948.
Getting list of p-values for id 9948.
3 of 3 done.
Calculating corrections for multiple testing (n=69351), please wait...
Done; whole program took 0.322 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	214252_s_at	216266_s_at	AK025637	ARFGEF1	0.748046	2.914916e-16	2.021523e-11	2.021523e-11
2	214252_s_at	209941_at	U50062	RIPK1	0.732195	2.498774e-15	1.732924e-10	8.664622e-11
3	214252_s_at	210337_s_at	U18197	ACLY	0.732123	2.522546e-15	1.749411e-10	5.831369e-11
4	214252_s_at	221643_s_at	AF016005	RERE	0.730245	3.220807e-15	2.233662e-10	5.584154e-11
5	214252_s_at	202955_s_at	AF084520	ARFGEF1	0.728806	3.879165e-15	2.690240e-10	5.380480e-11
6	214252_s_at	224868_at	BE961925	ZDHHC5	0.720980	1.044699e-14	7.245094e-10	1.207516e-10
7	214252_s_at	208840_s_at	AU149503	G3BP2	0.720359	1.128535e-14	7.826505e-10	1.118072e-10
8	214252_s_at	210667_s_at	D86062		0.718152	1.482218e-14	1.027933e-9	1.284916e-10
9	214252_s_at	205836_s_at	NM_022828	YTHDC2	0.718078	1.495655e-14	1.037251e-9	1.152502e-10
10	214252_s_at	214908_s_at	AC004893	TRRAP	0.716173	1.888489e-14	1.309686e-9	1.309686e-10
11	214252_s_at	210285_x_at	BC000383	WTAP	0.709828	4.050458e-14	2.809033e-9	2.553667e-10
12	214252_s_at	206920_s_at	NM_001499	GLE1	0.708493	4.744041e-14	3.290040e-9	2.741700e-10
13	214252_s_at	200973_s_at	NM_005724	TSPAN3	0.708003	5.026114e-14	3.485660e-9	2.681277e-10
14	214252_s_at	244462_at	AA811983	ZNF224	0.707775	5.162739e-14	3.580411e-9	2.557436e-10
15	214252_s_at	1554148_a_at	BC014416	SLC33A1	0.706970	5.674348e-14	3.935217e-9	2.623478e-10
16	214252_s_at	210773_s_at	U81501	FPR2	0.706523	5.979783e-14	4.147039e-9	2.591900e-10
17	214252_s_at	238451_at	BF693302	MPP7	0.705777	6.524544e-14	4.524836e-9	2.661669e-10
18	214252_s_at	1565269_s_at	AF047022	ATF1	0.705752	6.542944e-14	4.537597e-9	2.520887e-10
19	214252_s_at	219892_at	NM_023003	TM6SF1	0.705032	7.115636e-14	4.934764e-9	2.597244e-10
20	214252_s_at	200769_s_at	NM_005911	MAT2A	0.705017	7.128476e-14	4.943669e-9	2.471835e-10
21	214252_s_at	201633_s_at	AW235051	CYB5B	0.704587	7.493718e-14	5.196968e-9	2.474747e-10
22	214252_s_at	222417_s_at	AF121855	SNX5	0.704252	7.790542e-14	5.402819e-9	2.455827e-10
23	214252_s_at	215794_x_at	AC006144	GLUD2	0.703053	8.948527e-14	6.205893e-9	2.698214e-10
24	214252_s_at	202316_x_at	AW241715	UBE4B	0.701677	1.048364e-13	7.270506e-9	3.029377e-10
25	214252_s_at	222686_s_at	AL572407	CPPED1	0.701284	1.096690e-13	7.605652e-9	3.042261e-10
26	214252_s_at	218122_s_at	NM_021627	SENP2	0.699994	1.270792e-13	8.813073e-9	3.389643e-10
27	214252_s_at	243407_at	BG257097	MFSD8	0.697831	1.623998e-13	1.126259e-8	4.171330e-10
28	214252_s_at	219931_s_at	NM_021633	KLHL12	0.697529	1.680392e-13	1.165369e-8	4.162031e-10
29	214252_s_at	215739_s_at	AJ003062	TUBGCP3	0.695612	2.084044e-13	1.445306e-8	4.983812e-10
30	214252_s_at	222502_s_at	BC005193	UFM1	0.695311	2.155254e-13	1.494690e-8	4.982301e-10
31	214252_s_at	209078_s_at	AF276920	TXN2	0.695114	2.203243e-13	1.527971e-8	4.928939e-10
32	204085_s_at	226180_at	BF439595	WDR36	0.694771	2.289333e-13	1.587675e-8	4.961484e-10
33	214252_s_at	206959_s_at	NM_023011	UPF3A	0.694476	2.365723e-13	1.640653e-8	4.971675e-10
34	214252_s_at	224455_s_at	BC006112	ADPGK	0.694450	2.372576e-13	1.645405e-8	4.839427e-10
35	214252_s_at	1554834_a_at	AY062002	RASSF5	0.693897	2.523076e-13	1.749778e-8	4.999366e-10
36	214252_s_at	232432_s_at	AK022818	SLC30A5	0.693286	2.700301e-13	1.872686e-8	5.201905e-10
37	214252_s_at	210787_s_at	AF140507	CAMKK2	0.693143	2.743288e-13	1.902498e-8	5.141885e-10
38	214252_s_at	201718_s_at	BF511685	EPB41L2	0.691035	3.461337e-13	2.400472e-8	6.317031e-10
39	214252_s_at	AFFX-HSAC07/X00351_5_at	AFFX-HSAC07/X00351_5	ACTB	0.690685	3.597053e-13	2.494592e-8	6.396390e-10
40	214252_s_at	201799_s_at	AI927993	OSBP	0.689843	3.944573e-13	2.735601e-8	6.839001e-10
41	214252_s_at	226524_at	AI458735	C3orf38	0.689193	4.234354e-13	2.936567e-8	7.162358e-10
42	214252_s_at	209463_s_at	D50544	TAF12	0.689081	4.286589e-13	2.972792e-8	7.078077e-10
43	214252_s_at	206544_x_at	NM_003070	SMARCA2	0.688974	4.336948e-13	3.007717e-8	6.994691e-10
44	214252_s_at	211825_s_at	AF327066		0.688866	4.387841e-13	3.043012e-8	6.915935e-10
45	214252_s_at	204426_at	NM_006815	TMED2	0.688804	4.417935e-13	3.063882e-8	6.808627e-10
46	214252_s_at	200946_x_at	AI339331	GLUD1	0.688388	4.622332e-13	3.205633e-8	6.968768e-10
47	214252_s_at	AFFX-HSAC07/X00351_M_at	AFFX-HSAC07/X00351_M	ACTB	0.688074	4.782562e-13	3.316755e-8	7.056925e-10
48	214252_s_at	202162_s_at	AI769416	CNOT8	0.687021	5.360143e-13	3.717313e-8	7.744401e-10
49	214252_s_at	202101_s_at	NM_002881	RALB	0.686969	5.390517e-13	3.738377e-8	7.629341e-10
50	214252_s_at	207627_s_at	NM_005653	TFCP2	0.686960	5.396053e-13	3.742217e-8	7.484433e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation