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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
5707	205941_s_at	AI376003	COL10A1		collagen, type X, alpha 1
10944	217428_s_at	X98568	COL10A1		collagen, type X, alpha 1

Fetching correlation data, please wait...
Getting list of correlations for id 5707.
Getting list of p-values for id 5707.
1 of 2 done.
Getting list of correlations for id 10944.
Getting list of p-values for id 10944.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.214 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	217428_s_at	1554741_s_at	AF523265		0.732792	2.310905e-15	1.068424e-10	1.068424e-10
2	217428_s_at	201744_s_at	NM_002345	LUM	0.706439	6.038933e-14	2.792040e-9	1.396020e-9
3	217428_s_at	201215_at	NM_005032	PLS3	0.702062	1.002982e-13	4.637186e-9	1.545729e-9
4	217428_s_at	226022_at	AU144882	SASH1	0.687089	5.321003e-13	2.460113e-8	6.150282e-9
5	217428_s_at	209120_at	AL037401	NR2F2	0.674879	1.930549e-12	8.925700e-8	1.785140e-8
6	217428_s_at	226112_at	AI678717	SGCB	0.669969	3.186328e-12	1.473167e-7	2.455278e-8
7	217428_s_at	204237_at	NM_016315	GULP1	0.667959	3.901258e-12	1.803708e-7	2.576725e-8
8	217428_s_at	209101_at	M92934	CTGF	0.665147	5.164867e-12	2.387924e-7	2.984906e-8
9	217428_s_at	209335_at	AI281593	DCN	0.664147	5.702641e-12	2.636559e-7	2.929510e-8
10	217428_s_at	227826_s_at	AW138143		0.660245	8.364216e-12	3.867112e-7	3.867112e-8
11	205941_s_at	217107_at	AL035603		0.654970	1.391196e-11	6.432057e-7	5.847325e-8
12	217428_s_at	204201_s_at	NM_006264	PTPN13	0.653987	1.527775e-11	7.063514e-7	5.886262e-8
13	217428_s_at	200795_at	NM_004684	SPARCL1	0.652873	1.698341e-11	7.852109e-7	6.040084e-8
14	217428_s_at	209656_s_at	AL136550	TMEM47	0.650219	2.181137e-11	1.008427e-6	7.203049e-8
15	217428_s_at	224894_at	BF247906	YAP1	0.650192	2.186738e-11	1.011016e-6	6.740109e-8
16	217428_s_at	226837_at	BE967019	SPRED1	0.647911	2.706011e-11	1.251097e-6	7.819358e-8
17	217428_s_at	207738_s_at	NM_013436	NCKAP1	0.647282	2.868966e-11	1.326438e-6	7.802574e-8
18	217428_s_at	215073_s_at	AL554245	NR2F2	0.646117	3.195786e-11	1.477540e-6	8.208553e-8
19	205941_s_at	226262_at	AA534526		-0.645497	3.384234e-11	1.564667e-6	8.235088e-8
20	217428_s_at	222722_at	AV700059	OGN	0.644619	3.669161e-11	1.696400e-6	8.481999e-8
21	217428_s_at	228728_at	BF724137	C7orf58	0.644152	3.829788e-11	1.770664e-6	8.431735e-8
22	217428_s_at	226282_at	AW129783	PTPN14	0.640858	5.171718e-11	2.391092e-6	1.086860e-7
23	217428_s_at	218706_s_at	AW575493	GRAMD3	0.640662	5.264463e-11	2.433972e-6	1.058249e-7
24	217428_s_at	229657_at	BF431989	THRB	0.639757	5.713302e-11	2.641488e-6	1.100620e-7
25	217428_s_at	202609_at	NM_004447	EPS8	0.639521	5.836292e-11	2.698351e-6	1.079341e-7
26	217428_s_at	225728_at	AI659533	SORBS2	0.636799	7.451858e-11	3.445292e-6	1.325112e-7
27	217428_s_at	201150_s_at	NM_000362	TIMP3	0.635246	8.557677e-11	3.956556e-6	1.465391e-7
28	217428_s_at	224811_at	BF112093	LPP	0.634848	8.865249e-11	4.098759e-6	1.463843e-7
29	217428_s_at	217890_s_at	NM_018222	PARVA	0.634470	9.166712e-11	4.238138e-6	1.461427e-7
30	217428_s_at	229127_at	BF195118		0.630246	1.328891e-10	6.143997e-6	2.047999e-7
31	217428_s_at	231879_at	AL096771	COL12A1	0.629793	1.382413e-10	6.391446e-6	2.061757e-7
32	217428_s_at	203881_s_at	NM_004010	DMD	0.629691	1.394662e-10	6.448080e-6	2.015025e-7
33	217428_s_at	201525_at	NM_001647	APOD	0.629157	1.461052e-10	6.755027e-6	2.046978e-7
34	217428_s_at	212353_at	AI479175	SULF1	0.629021	1.478369e-10	6.835090e-6	2.010320e-7
35	217428_s_at	205289_at	AA583044	BMP2	0.628887	1.495666e-10	6.915063e-6	1.975732e-7
36	217428_s_at	222885_at	AF205940	EMCN	0.628283	1.576113e-10	7.287000e-6	2.024167e-7
37	217428_s_at	202994_s_at	Z95331	FBLN1	0.627645	1.665505e-10	7.700297e-6	2.081161e-7
38	205941_s_at	202326_at	NM_006709	EHMT2	-0.627352	1.708258e-10	7.897961e-6	2.078411e-7
39	217428_s_at	224694_at	AF279145	ANTXR1	0.625430	2.015383e-10	9.317922e-6	2.389211e-7
40	205941_s_at	229548_at	BG231709		-0.624823	2.122904e-10	9.815032e-6	2.453758e-7
41	217428_s_at	216215_s_at	AL049748	RBM9	0.624003	2.276994e-10	1.052745e-5	2.567671e-7
42	217428_s_at	200974_at	NM_001613	ACTA2	0.623165	2.445595e-10	1.130697e-5	2.692135e-7
43	217428_s_at	208096_s_at	NM_030820	COL21A1	0.622571	2.572060e-10	1.189166e-5	2.765503e-7
44	217428_s_at	225664_at	AA788946	COL12A1	0.621812	2.743056e-10	1.268225e-5	2.882329e-7
45	217428_s_at	212097_at	AU147399	CAV1	0.621562	2.801629e-10	1.295305e-5	2.878456e-7
46	217428_s_at	209684_at	AL136924	RIN2	0.621383	2.844506e-10	1.315129e-5	2.858976e-7
47	217428_s_at	227827_at	AW138143		0.621341	2.854616e-10	1.319803e-5	2.808092e-7
48	217428_s_at	212077_at	AL583520	CALD1	0.620843	2.977225e-10	1.376490e-5	2.867688e-7
49	217428_s_at	210946_at	AF014403	PPAP2A	0.619737	3.267788e-10	1.510829e-5	3.083325e-7
50	217428_s_at	219427_at	NM_024582	FAT4	0.619676	3.284539e-10	1.518574e-5	3.037148e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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