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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4837	204320_at	NM_001854	COL11A1		collagen, type XI, alpha 1
22530	37892_at	J04177	COL11A1		collagen, type XI, alpha 1

Fetching correlation data, please wait...
Getting list of correlations for id 4837.
Getting list of p-values for id 4837.
1 of 2 done.
Getting list of correlations for id 22530.
Getting list of p-values for id 22530.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.186 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204320_at	37892_at	J04177	COL11A1	0.866639	1.753228e-26	8.105875e-22	8.105875e-22
2	37892_at	204320_at	NM_001854	COL11A1	0.866639	1.753228e-26	8.105875e-22	4.052937e-22
3	204320_at	203083_at	NM_003247	THBS2	0.585556	4.900736e-9	2.265806e-4	7.552688e-5
4	37892_at	222455_s_at	AF237771	PARVA	0.572816	1.243580e-8	5.749566e-4	1.437392e-4
5	204320_at	211737_x_at	BC005916	PTN	0.566204	1.985542e-8	9.179957e-4	1.835991e-4
6	204320_at	206858_s_at	NM_004503	HOXC6	0.551578	5.393302e-8	2.493539e-3	4.155899e-4
7	37892_at	201572_x_at	NM_001921	DCTD	0.547535	7.050182e-8	3.259581e-3	4.656545e-4
8	37892_at	204358_s_at	AF169676	FLRT2	0.546106	7.743532e-8	3.580145e-3	4.475181e-4
9	204320_at	225303_at	AI049973	KIRREL	0.544759	8.456403e-8	3.909733e-3	4.344148e-4
10	37892_at	201995_at	NM_000127	EXT1	0.544001	8.884388e-8	4.107608e-3	4.107608e-4
11	37892_at	1568619_s_at	BC015343	ITPRIPL2	0.543615	9.110425e-8	4.212114e-3	3.829194e-4
12	37892_at	220952_s_at	NM_019012	PLEKHA5	0.541464	1.047167e-7	4.841474e-3	4.034561e-4
13	204320_at	226137_at	AI288759	ZFHX3	0.537948	1.312250e-7	6.067058e-3	4.666968e-4
14	37892_at	241879_at	AW511222	LPP	0.530802	2.059406e-7	9.521458e-3	6.801041e-4
15	37892_at	205066_s_at	NM_006208	ENPP1	0.528436	2.385412e-7	1.102871e-2	7.352476e-4
16	37892_at	203083_at	NM_003247	THBS2	0.527382	2.545831e-7	1.177040e-2	7.356498e-4
17	37892_at	204036_at	AW269335	LPAR1	0.526677	2.658860e-7	1.229297e-2	7.231160e-4
18	37892_at	201658_at	AU151560	ARL1	0.522580	3.415277e-7	1.579019e-2	8.772330e-4
19	37892_at	227812_at	BF432648	TNFRSF19	0.520055	3.978748e-7	1.839535e-2	9.681761e-4
20	204320_at	225381_at	AW162210	LOC399959	0.519731	4.057217e-7	1.875814e-2	9.379069e-4
21	204320_at	205422_s_at	NM_004791	ITGBL1	0.518207	4.445859e-7	2.055498e-2	9.788087e-4
22	204320_at	220952_s_at	NM_019012	PLEKHA5	0.513566	5.857946e-7	2.708363e-2	1.231074e-3
23	204320_at	232113_at	N90870		0.512941	6.077530e-7	2.809885e-2	1.221689e-3
24	37892_at	226237_at	AL359062		0.512874	6.101537e-7	2.820985e-2	1.175410e-3
25	204320_at	226722_at	BE874872	FAM20C	0.508127	8.051766e-7	3.722653e-2	1.489061e-3
26	37892_at	229312_s_at	BF434321	GKAP1	0.506624	8.782654e-7	4.060572e-2	1.561758e-3
27	37892_at	232523_at	AU144892	MEGF10	0.506607	8.791437e-7	4.064633e-2	1.505420e-3
28	37892_at	211737_x_at	BC005916	PTN	0.506334	8.931076e-7	4.129193e-2	1.474712e-3
29	204320_at	227792_at	AA490685	ITPRIPL2	0.505549	9.343961e-7	4.320087e-2	1.489685e-3
30	204320_at	225078_at	AV686514	EMP2	0.505364	9.443736e-7	4.366217e-2	1.455406e-3
31	37892_at	225242_s_at	AW303375	CCDC80	0.504736	9.790372e-7	4.526481e-2	1.460155e-3
32	37892_at	219013_at	NM_022087	GALNT11	0.504179	1.010800e-6	4.673334e-2	1.460417e-3
33	37892_at	227792_at	AA490685	ITPRIPL2	0.504071	1.017085e-6	4.702393e-2	1.424967e-3
34	37892_at	205422_s_at	NM_004791	ITGBL1	0.503804	1.032743e-6	4.774785e-2	1.404348e-3
35	37892_at	228046_at	AA741243	ZNF827	0.503251	1.065911e-6	4.928133e-2	1.408038e-3
36	37892_at	226137_at	AI288759	ZFHX3	0.503209	1.068475e-6	4.939989e-2	1.372219e-3
37	37892_at	204604_at	NM_012395	CDK14	0.502121	1.136816e-6	5.255955e-2	1.420528e-3
38	204320_at	225664_at	AA788946	COL12A1	0.498998	1.356586e-6	6.272039e-2	1.650537e-3
39	204320_at	1568619_s_at	BC015343	ITPRIPL2	0.497730	1.456829e-6	6.735503e-2	1.727052e-3
40	204320_at	201185_at	NM_002775	HTRA1	0.496721	1.541484e-6	7.126898e-2	1.781724e-3
41	204320_at	204358_s_at	AF169676	FLRT2	0.496379	1.571280e-6	7.264654e-2	1.771867e-3
42	204320_at	204036_at	AW269335	LPAR1	0.494821	1.713804e-6	7.923603e-2	1.886572e-3
43	37892_at	226834_at	BG112263		0.494173	1.776565e-6	8.213772e-2	1.910180e-3
44	204320_at	222455_s_at	AF237771	PARVA	0.492211	1.980128e-6	9.154922e-2	2.080664e-3
45	37892_at	203903_s_at	NM_014799	HEPH	0.491567	2.051669e-6	9.485688e-2	2.107931e-3
46	37892_at	235956_at	AI797063	KIAA1377	0.489843	2.255169e-6	1.042655e-1	2.266641e-3
47	204320_at	225242_s_at	AW303375	CCDC80	0.489722	2.270134e-6	1.049574e-1	2.233136e-3
48	204320_at	241879_at	AW511222	LPP	0.487529	2.558400e-6	1.182851e-1	2.464272e-3
49	204320_at	201995_at	NM_000127	EXT1	0.486917	2.644816e-6	1.222804e-1	2.495519e-3
50	37892_at	226656_at	AW024741	CRTAP	0.484958	2.940192e-6	1.359368e-1	2.718736e-3

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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