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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 4 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
8231	211779_x_at	BC006155	AP2A2		adaptor-related protein complex 2, alpha 2 subunit
8489	212159_x_at	AI125280	AP2A2		adaptor-related protein complex 2, alpha 2 subunit
8491	212161_at	AA994666	AP2A2		adaptor-related protein complex 2, alpha 2 subunit
10547	215764_x_at	AA877641	AP2A2		adaptor-related protein complex 2, alpha 2 subunit

Fetching correlation data, please wait...
Getting list of correlations for id 8231.
Getting list of p-values for id 8231.
1 of 4 done.
Getting list of correlations for id 8489.
Getting list of p-values for id 8489.
2 of 4 done.
Getting list of correlations for id 8491.
Getting list of p-values for id 8491.
3 of 4 done.
Getting list of correlations for id 10547.
Getting list of p-values for id 10547.
4 of 4 done.
Calculating corrections for multiple testing (n=92468), please wait...
Done; whole program took 0.302 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	211779_x_at	212159_x_at	AI125280	AP2A2	0.872100	3.537151e-27	3.270733e-22	3.270733e-22
2	212159_x_at	211779_x_at	BC006155	AP2A2	0.872100	3.537151e-27	3.270733e-22	1.635366e-22
3	215764_x_at	211779_x_at	BC006155	AP2A2	0.820887	1.193274e-21	1.103397e-16	3.677989e-17
4	211779_x_at	215764_x_at	AA877641	AP2A2	0.820887	1.193274e-21	1.103397e-16	2.758492e-17
5	212159_x_at	215764_x_at	AA877641	AP2A2	0.762723	3.441554e-17	3.182336e-12	6.364673e-13
6	215764_x_at	212159_x_at	AI125280	AP2A2	0.762723	3.441554e-17	3.182336e-12	5.303894e-13
7	211779_x_at	48106_at	H14241	SLC48A1	0.702634	9.392101e-14	8.684688e-9	1.240670e-9
8	212159_x_at	48106_at	H14241	SLC48A1	0.701286	1.096357e-13	1.013779e-8	1.267224e-9
9	211779_x_at	218262_at	NM_022762	RMND5B	0.699014	1.420523e-13	1.313529e-8	1.459477e-9
10	212159_x_at	44673_at	N53555	SIGLEC1	0.694149	2.453549e-13	2.268748e-8	2.268748e-9
11	211779_x_at	203920_at	NM_005693	NR1H3	0.683255	8.029009e-13	7.424264e-8	6.749331e-9
12	212159_x_at	203718_at	NM_006702	PNPLA6	0.681266	9.914369e-13	9.167619e-8	7.639682e-9
13	211779_x_at	44673_at	N53555	SIGLEC1	0.672696	2.415022e-12	2.233123e-7	1.717787e-8
14	212159_x_at	203920_at	NM_005693	NR1H3	0.667487	4.090475e-12	3.782380e-7	2.701700e-8
15	212159_x_at	209729_at	BC001782	GAS2L1	0.667379	4.134646e-12	3.823225e-7	2.548816e-8
16	211779_x_at	203718_at	NM_006702	PNPLA6	0.665639	4.918657e-12	4.548184e-7	2.842615e-8
17	212159_x_at	200827_at	NM_000302	PLOD1	0.659873	8.672500e-12	8.019287e-7	4.717228e-8
18	211779_x_at	203508_at	NM_001066	TNFRSF1B	0.658105	1.029365e-11	9.518333e-7	5.287963e-8
19	212159_x_at	201809_s_at	NM_000118	ENG	0.657570	1.083942e-11	1.002299e-6	5.275260e-8
20	211779_x_at	219519_s_at	NM_023068	SIGLEC1	0.657300	1.112492e-11	1.028699e-6	5.143495e-8
21	212159_x_at	32502_at	AL041124	GDPD5	0.655278	1.350824e-11	1.249080e-6	5.948001e-8
22	212159_x_at	203508_at	NM_001066	TNFRSF1B	0.651130	2.002325e-11	1.851509e-6	8.415952e-8
23	211779_x_at	209216_at	BC000464	WDR45	0.649858	2.256361e-11	2.086412e-6	9.071358e-8
24	212159_x_at	205423_at	NM_001127	AP1B1	0.649116	2.418539e-11	2.236375e-6	9.318229e-8
25	212159_x_at	218855_at	NM_016372	TPRA1	0.648817	2.486969e-11	2.299651e-6	9.198602e-8
26	212159_x_at	201564_s_at	NM_003088	FSCN1	0.647818	2.729600e-11	2.524007e-6	9.707717e-8
27	212159_x_at	213043_s_at	AI023317	MED24	0.641575	4.846097e-11	4.481089e-6	1.659663e-7
28	212159_x_at	212155_at	AA085748	RNF187	0.641269	4.982385e-11	4.607112e-6	1.645397e-7
29	212159_x_at	212256_at	BE906572	GALNT10	0.641092	5.063312e-11	4.681943e-6	1.614463e-7
30	211779_x_at	218855_at	NM_016372	TPRA1	0.640407	5.387179e-11	4.981416e-6	1.660472e-7
31	211779_x_at	209729_at	BC001782	GAS2L1	0.640021	5.579009e-11	5.158798e-6	1.664128e-7
32	211779_x_at	201564_s_at	NM_003088	FSCN1	0.637222	7.175285e-11	6.634843e-6	2.073388e-7
33	211779_x_at	215049_x_at	Z22969	CD163	0.637083	7.265241e-11	6.718023e-6	2.035765e-7
34	212159_x_at	200802_at	NM_006513	SARS	0.636357	7.751983e-11	7.168104e-6	2.108266e-7
35	215764_x_at	44673_at	N53555	SIGLEC1	0.634872	8.846318e-11	8.180013e-6	2.337147e-7
36	211779_x_at	201809_s_at	NM_000118	ENG	0.634337	9.275225e-11	8.576615e-6	2.382393e-7
37	212159_x_at	218632_at	NM_024602	HECTD3	0.634178	9.406708e-11	8.698194e-6	2.350863e-7
38	212159_x_at	203547_at	U47924	CD4	0.633842	9.690769e-11	8.960861e-6	2.358121e-7
39	212159_x_at	218262_at	NM_022762	RMND5B	0.632669	1.074728e-10	9.937799e-6	2.548154e-7
40	212159_x_at	219519_s_at	NM_023068	SIGLEC1	0.632003	1.139456e-10	1.053632e-5	2.634080e-7
41	211779_x_at	219357_at	NM_014027	GTPBP1	0.630475	1.302556e-10	1.204447e-5	2.937677e-7
42	212159_x_at	209216_at	BC000464	WDR45	0.630379	1.313566e-10	1.214628e-5	2.891972e-7
43	212159_x_at	205392_s_at	NM_004166		0.630146	1.340489e-10	1.239523e-5	2.882613e-7
44	212159_x_at	207856_s_at	NM_017951		0.627884	1.631462e-10	1.508581e-5	3.428592e-7
45	212159_x_at	221708_s_at	BC006214	UNC45A	0.627645	1.665549e-10	1.540100e-5	3.422444e-7
46	212159_x_at	38269_at	AL050147	PRKD2	0.627053	1.752927e-10	1.620897e-5	3.523689e-7
47	212159_x_at	215049_x_at	Z22969	CD163	0.626236	1.880705e-10	1.739050e-5	3.700107e-7
48	211779_x_at	217841_s_at	NM_016147	PPME1	0.625119	2.069948e-10	1.914039e-5	3.987582e-7
49	212159_x_at	223290_at	BC000320	PDXP	0.625098	2.073595e-10	1.917412e-5	3.913085e-7
50	215764_x_at	203508_at	NM_001066	TNFRSF1B	0.624911	2.107104e-10	1.948397e-5	3.896795e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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