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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
9262	213058_at	AL033538	TTC28		tetratricopeptide repeat domain 28
10322	215146_s_at	AB028966	TTC28		tetratricopeptide repeat domain 28

Fetching correlation data, please wait...
Getting list of correlations for id 9262.
Getting list of p-values for id 9262.
1 of 2 done.
Getting list of correlations for id 10322.
Getting list of p-values for id 10322.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.278 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	215146_s_at	212761_at	AI949687	TCF7L2	0.745452	4.188186e-16	1.936366e-11	1.936366e-11
2	215146_s_at	235570_at	AW298235	RBMS3	0.739269	9.764793e-16	4.514655e-11	2.257327e-11
3	213058_at	224811_at	BF112093	LPP	0.737051	1.315179e-15	6.080596e-11	2.026865e-11
4	213058_at	205407_at	NM_021111	RECK	0.735321	1.655835e-15	7.655589e-11	1.913897e-11
5	213058_at	221045_s_at	NM_016831	PER3	0.732708	2.336494e-15	1.080255e-10	2.160509e-11
6	213058_at	212698_s_at	BF966021	SEPT10	0.731336	2.795181e-15	1.292324e-10	2.153873e-11
7	215146_s_at	227312_at	AI694536	SNTB2	0.729183	3.695183e-15	1.708431e-10	2.440616e-11
8	213058_at	226282_at	AW129783	PTPN14	0.725698	5.772815e-15	2.669003e-10	3.336254e-11
9	213058_at	203874_s_at	NM_003069	SMARCA1	0.721957	9.248555e-15	4.275977e-10	4.751086e-11
10	215146_s_at	222455_s_at	AF237771	PARVA	0.721168	1.020580e-14	4.718550e-10	4.718550e-11
11	213058_at	202011_at	NM_003257	TJP1	0.720374	1.126420e-14	5.207890e-10	4.734446e-11
12	213058_at	231940_at	AI369933	ZNF529	0.713519	2.604952e-14	1.204373e-9	1.003645e-10
13	215146_s_at	226225_at	BE967311	MCC	0.709200	4.363669e-14	2.017499e-9	1.551922e-10
14	213058_at	227261_at	AA020010	KLF12	0.709054	4.439430e-14	2.052526e-9	1.466090e-10
15	213058_at	226225_at	BE967311	MCC	0.708474	4.754572e-14	2.198229e-9	1.465486e-10
16	213058_at	225688_s_at	AK025444	PHLDB2	0.706444	6.034816e-14	2.790137e-9	1.743836e-10
17	215146_s_at	221045_s_at	NM_016831	PER3	0.705728	6.561416e-14	3.033605e-9	1.784474e-10
18	215146_s_at	41644_at	AB018333	SASH1	0.704692	7.402513e-14	3.422478e-9	1.901377e-10
19	213058_at	201215_at	NM_005032	PLS3	0.704050	7.974360e-14	3.686865e-9	1.940456e-10
20	215146_s_at	217890_s_at	NM_018222	PARVA	0.700033	1.265145e-13	5.849270e-9	2.924635e-10
21	213058_at	226184_at	AI123567	FMNL2	0.699915	1.282298e-13	5.928578e-9	2.823132e-10
22	215146_s_at	225339_at	BG290577	SPAG9	0.699672	1.318127e-13	6.094230e-9	2.770104e-10
23	213058_at	235078_at	AI393725		0.698951	1.430607e-13	6.614270e-9	2.875770e-10
24	213058_at	212149_at	AW470003	EFR3A	0.696943	1.795025e-13	8.299117e-9	3.457965e-10
25	213058_at	203216_s_at	NM_004999	MYO6	0.696503	1.886034e-13	8.719891e-9	3.487957e-10
26	215146_s_at	227692_at	AU153866	GNAI1	0.696249	1.940530e-13	8.971847e-9	3.450711e-10
27	213058_at	222885_at	AF205940	EMCN	0.696220	1.946739e-13	9.000551e-9	3.333537e-10
28	215146_s_at	213413_at	BG434174		0.694728	2.300157e-13	1.063455e-8	3.798053e-10
29	215146_s_at	244007_at	BE889301	ZNF462	0.693751	2.564501e-13	1.185671e-8	4.088522e-10
30	213058_at	225021_at	AA861416	ZNF532	0.693224	2.718797e-13	1.257009e-8	4.190029e-10
31	215146_s_at	241789_at	AW338699	RBMS3	0.693053	2.770737e-13	1.281023e-8	4.132331e-10
32	213058_at	209493_at	AF338650	PDZD2	0.693008	2.784782e-13	1.287516e-8	4.023488e-10
33	213058_at	213397_x_at	AI761728		0.692680	2.887570e-13	1.335039e-8	4.045573e-10
34	213058_at	225949_at	N21030	NRBP2	0.692621	2.906475e-13	1.343780e-8	3.952293e-10
35	215146_s_at	226000_at	AI423056	CTTNBP2NL	0.691522	3.281129e-13	1.516997e-8	4.334278e-10
36	213058_at	226721_at	AW517711	DPY19L4	0.690897	3.514247e-13	1.624777e-8	4.513270e-10
37	215146_s_at	226837_at	BE967019	SPRED1	0.690068	3.848478e-13	1.779305e-8	4.808933e-10
38	213058_at	226022_at	AU144882	SASH1	0.687970	4.836656e-13	2.236179e-8	5.884683e-10
39	213058_at	205357_s_at	NM_000685	AGTR1	0.687926	4.859943e-13	2.246946e-8	5.761400e-10
40	213058_at	226402_at	AK026498	CYP2U1	0.687090	5.320601e-13	2.459927e-8	6.149816e-10
41	213058_at	204400_at	NM_005864	EFS	0.686551	5.639586e-13	2.607406e-8	6.359528e-10
42	213058_at	217890_s_at	NM_018222	PARVA	0.686249	5.826038e-13	2.693610e-8	6.413358e-10
43	215146_s_at	225946_at	BG484552	RASSF8	0.685641	6.219779e-13	2.875653e-8	6.687564e-10
44	215146_s_at	218718_at	NM_016205	PDGFC	0.685241	6.492790e-13	3.001876e-8	6.822446e-10
45	215146_s_at	226402_at	AK026498	CYP2U1	0.685026	6.644950e-13	3.072226e-8	6.827169e-10
46	215146_s_at	212423_at	AK024784	ZCCHC24	0.684983	6.675645e-13	3.086418e-8	6.709603e-10
47	215146_s_at	202342_s_at	NM_015271	TRIM2	0.684235	7.231898e-13	3.343596e-8	7.114034e-10
48	213058_at	209656_s_at	AL136550	TMEM47	0.684229	7.236698e-13	3.345815e-8	6.970448e-10
49	215146_s_at	213058_at	AL033538	TTC28	0.683960	7.447213e-13	3.443144e-8	7.026825e-10
50	213058_at	215146_s_at	AB028966	TTC28	0.683960	7.447213e-13	3.443144e-8	6.886289e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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