[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 5 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
981	1558747_at	AA336502	SMCHD1		structural maintenance of chromosomes flexible hinge domain containing 1
8854	212569_at	AV699744	SMCHD1		structural maintenance of chromosomes flexible hinge domain containing 1
8860	212577_at	AA868754	SMCHD1		structural maintenance of chromosomes flexible hinge domain containing 1
8862	212579_at	AB014550	SMCHD1		structural maintenance of chromosomes flexible hinge domain containing 1
21456	241620_at	AA873021	SMCHD1		structural maintenance of chromosomes flexible hinge domain containing 1

Fetching correlation data, please wait...
Getting list of correlations for id 981.
Getting list of p-values for id 981.
1 of 5 done.
Getting list of correlations for id 8854.
Getting list of p-values for id 8854.
2 of 5 done.
Getting list of correlations for id 8860.
Getting list of p-values for id 8860.
3 of 5 done.
Getting list of correlations for id 8862.
Getting list of p-values for id 8862.
4 of 5 done.
Getting list of correlations for id 21456.
Getting list of p-values for id 21456.
5 of 5 done.
Calculating corrections for multiple testing (n=115585), please wait...
Done; whole program took 0.663 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	1558747_at	235435_at	BF433048	AASDH	0.963916	6.719920e-49	7.767219e-44	7.767219e-44
2	1558747_at	239571_at	AI123399		0.953191	2.333408e-44	2.697069e-39	1.348535e-39
3	1558747_at	209088_s_at	T70262	UBN1	0.948670	9.340281e-43	1.079596e-37	3.598655e-38
4	1558747_at	229586_at	AW300405	CHD9	0.943081	5.781700e-41	6.682778e-36	1.670694e-36
5	1558747_at	232238_at	AK001380	ASPM	0.932865	4.095922e-38	4.734271e-33	9.468542e-34
6	1558747_at	213328_at	AI936517	NEK1	0.930384	1.724501e-37	1.993264e-32	3.322107e-33
7	1558747_at	222540_s_at	BG286920	RSF1	0.929488	2.861271e-37	3.307200e-32	4.724572e-33
8	1558747_at	235425_at	AW965339	SGOL2	0.929264	3.244619e-37	3.750293e-32	4.687867e-33
9	1558747_at	208859_s_at	AI650257	ATRX	0.927018	1.117005e-36	1.291091e-31	1.434545e-32
10	1558747_at	235009_at	AI049791	BOD1L	0.923985	5.575940e-36	6.444950e-31	6.444950e-32
11	1558747_at	236620_at	AU150841	RIF1	0.922885	9.829006e-36	1.136086e-30	1.032805e-31
12	1558747_at	242197_x_at	W95035	CD36	0.921774	1.727064e-35	1.996227e-30	1.663522e-31
13	1558747_at	1558076_at	BF380051	ANKRD32	0.921297	2.195158e-35	2.537273e-30	1.951749e-31
14	1558747_at	202905_x_at	AI796269	NBN	0.920023	4.130584e-35	4.774336e-30	3.410240e-31
15	1558747_at	1555058_a_at	BC034621	LPGAT1	0.918073	1.066186e-34	1.232352e-29	8.215677e-31
16	1558747_at	242352_at	AW272262	NIPBL	0.917708	1.269966e-34	1.467890e-29	9.174312e-31
17	1558747_at	229982_at	AW195525	QSER1	0.914889	4.771350e-34	5.514964e-29	3.244097e-30
18	1558747_at	236533_at	AW236958	ASAP1	0.911789	1.942287e-33	2.244993e-28	1.247218e-29
19	1558747_at	1558678_s_at	BE708432	MALAT1	0.911272	2.441471e-33	2.821974e-28	1.485250e-29
20	1558747_at	214464_at	NM_003607	CDC42BPA	0.910887	2.893637e-33	3.344611e-28	1.672305e-29
21	212577_at	207549_x_at	NM_002389	CD46	0.910733	3.096051e-33	3.578571e-28	1.704081e-29
22	1558747_at	230180_at	AA521056		0.910571	3.324555e-33	3.842686e-28	1.746676e-29
23	212577_at	1554167_a_at	BC012032	GOLGA7	0.909414	5.497915e-33	6.354765e-28	2.762941e-29
24	212577_at	211574_s_at	D84105	CD46	0.908870	6.951308e-33	8.034670e-28	3.347779e-29
25	1558747_at	208993_s_at	AW340788	PPIG	0.907885	1.058579e-32	1.223558e-27	4.894233e-29
26	212577_at	212008_at	N29889	UBXN4	0.906790	1.680901e-32	1.942870e-27	7.472576e-29
27	1558747_at	238346_s_at	AW973003	TGS1	0.906057	2.283060e-32	2.638875e-27	9.773610e-29
28	1558747_at	219437_s_at	NM_013275	ANKRD11	0.903206	7.336822e-32	8.480265e-27	3.028666e-28
29	1558747_at	213850_s_at	AI984932	SRSF2IP	0.902877	8.373447e-32	9.678449e-27	3.337396e-28
30	1558747_at	209258_s_at	AI373676	SMC3	0.902192	1.101786e-31	1.273500e-26	4.244998e-28
31	212577_at	1554868_s_at	BC013916	PCNP	0.901987	1.195223e-31	1.381499e-26	4.456447e-28
32	212577_at	200722_s_at	BG258784	CAPRIN1	0.901236	1.609865e-31	1.860762e-26	5.814882e-28
33	212577_at	200776_s_at	AL518328		0.900772	1.931954e-31	2.233049e-26	6.766815e-28
34	1558747_at	236254_at	BE048857	VPS13B	0.900391	2.243140e-31	2.592734e-26	7.625688e-28
35	1558747_at	35436_at	L06147	GOLGA2	0.900157	2.457557e-31	2.840567e-26	8.115907e-28
36	1558747_at	235266_at	AI139629	ATAD2	0.899584	3.072206e-31	3.551009e-26	9.863914e-28
37	212577_at	202199_s_at	AW082913	SRPK1	0.898168	5.297342e-31	6.122933e-26	1.654847e-27
38	212577_at	1554508_at	BC029917	PIK3AP1	0.896123	1.147935e-30	1.326841e-25	3.491686e-27
39	212577_at	214544_s_at	NM_003825	SNAP23	0.894837	1.851767e-30	2.140365e-25	5.488116e-27
40	1558747_at	213311_s_at	BF000251	TCF25	0.894775	1.894630e-30	2.189908e-25	5.474770e-27
41	212577_at	1552610_a_at	NM_002227	JAK1	0.894034	2.487442e-30	2.875110e-25	7.012463e-27
42	212577_at	202654_x_at	NM_022826	MARCH7	0.893911	2.602488e-30	3.008086e-25	7.162110e-27
43	212577_at	224407_s_at	AF344882	MST4	0.893869	2.643032e-30	3.054948e-25	7.104530e-27
44	212577_at	205716_at	NM_018843	SLC25A40	0.892795	3.906262e-30	4.515053e-25	1.026148e-26
45	1558747_at	228986_at	AW978375	OSBPL8	0.892655	4.108114e-30	4.748363e-25	1.055192e-26
46	241620_at	235009_at	AI049791	BOD1L	0.891480	6.266610e-30	7.243261e-25	1.574622e-26
47	212577_at	211559_s_at	L49506	CCNG2	0.891296	6.691391e-30	7.734245e-25	1.645584e-26
48	241620_at	242352_at	AW272262	NIPBL	0.891138	7.079040e-30	8.182308e-25	1.704647e-26
49	212577_at	204312_x_at	AI655737	CREB1	0.890837	7.880110e-30	9.108225e-25	1.858821e-26
50	212577_at	1554606_at	BC040527	CEP120	0.890824	7.914861e-30	9.148392e-25	1.829678e-26

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation