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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 3 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
5580	205656_at	NM_014459	PCDH17		protocadherin 17
16982	227289_at	AU119437	PCDH17		protocadherin 17
17899	228863_at	N69091	PCDH17		protocadherin 17

Fetching correlation data, please wait...
Getting list of correlations for id 5580.
Getting list of p-values for id 5580.
1 of 3 done.
Getting list of correlations for id 16982.
Getting list of p-values for id 16982.
2 of 3 done.
Getting list of correlations for id 17899.
Getting list of p-values for id 17899.
3 of 3 done.
Calculating corrections for multiple testing (n=69351), please wait...
Done; whole program took 0.288 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	228863_at	227289_at	AU119437	PCDH17	0.658304	1.009762e-11	7.002802e-7	7.002802e-7
2	227289_at	228863_at	N69091	PCDH17	0.658304	1.009762e-11	7.002802e-7	3.501401e-7
3	228863_at	219091_s_at	NM_024756	MMRN2	0.646293	3.144209e-11	2.180540e-6	7.268467e-7
4	228863_at	209386_at	AI346835	TM4SF1	0.605270	1.069086e-9	7.414220e-5	1.853555e-5
5	228863_at	213069_at	AI148659	HEG1	0.598647	1.803746e-9	1.250916e-4	2.501832e-5
6	228863_at	215073_s_at	AL554245	NR2F2	0.596609	2.113597e-9	1.465801e-4	2.443001e-5
7	228863_at	213075_at	AL050002	OLFML2A	0.592518	2.896143e-9	2.008504e-4	2.869291e-5
8	228863_at	226342_at	AW593244	SPTBN1	0.588934	3.802914e-9	2.637359e-4	3.296699e-5
9	228863_at	227780_s_at	AI422211	ECSCR	0.588077	4.056723e-9	2.813378e-4	3.125975e-5
10	228863_at	201939_at	NM_006622	PLK2	0.587936	4.099975e-9	2.843374e-4	2.843374e-5
11	228863_at	226694_at	BG540494		0.584666	5.236973e-9	3.631893e-4	3.301721e-5
12	228863_at	1558828_s_at	AL703532	LOC728264	0.580334	7.213155e-9	5.002395e-4	4.168663e-5
13	228863_at	225525_at	AB051458	KIAA1671	0.579240	7.814714e-9	5.419582e-4	4.168909e-5
14	228863_at	202967_at	NM_001512	GSTA4	0.578562	8.211827e-9	5.694984e-4	4.067846e-5
15	228863_at	226625_at	AW193698	TGFBR3	0.571133	1.402289e-8	9.725014e-4	6.483343e-5
16	228863_at	218124_at	NM_017750	RETSAT	0.565512	2.083960e-8	1.445247e-3	9.032795e-5
17	228863_at	207076_s_at	NM_000050	ASS1	0.561357	2.779825e-8	1.927837e-3	1.134022e-4
18	228863_at	205656_at	NM_014459	PCDH17	0.559212	3.220696e-8	2.233585e-3	1.240880e-4
19	205656_at	228863_at	N69091	PCDH17	0.559212	3.220696e-8	2.233585e-3	1.175571e-4
20	228863_at	242868_at	T70087		0.559042	3.258243e-8	2.259624e-3	1.129812e-4
21	228863_at	209120_at	AL037401	NR2F2	0.558845	3.302464e-8	2.290291e-3	1.090615e-4
22	228863_at	202620_s_at	NM_000935	PLOD2	0.558487	3.384175e-8	2.346959e-3	1.066800e-4
23	228863_at	225308_s_at	AB051515	TANC1	0.558397	3.404950e-8	2.361367e-3	1.026681e-4
24	228863_at	225188_at	AA194149	RAPH1	0.555828	4.054068e-8	2.811537e-3	1.171474e-4
25	228863_at	202202_s_at	NM_002290	LAMA4	0.555146	4.245264e-8	2.944133e-3	1.177653e-4
26	228863_at	227792_at	AA490685	ITPRIPL2	0.554533	4.424331e-8	3.068318e-3	1.180122e-4
27	228863_at	209121_x_at	M64497	NR2F2	0.554429	4.455520e-8	3.089948e-3	1.144425e-4
28	228863_at	201215_at	NM_005032	PLS3	0.553817	4.642679e-8	3.219744e-3	1.149909e-4
29	228863_at	230061_at	AW338625	TM4SF18	0.553004	4.902870e-8	3.400189e-3	1.172479e-4
30	228863_at	204464_s_at	NM_001957	EDNRA	0.550862	5.656704e-8	3.922981e-3	1.307660e-4
31	228863_at	241359_at	AA729232	TLCD2	0.550041	5.973950e-8	4.142994e-3	1.336450e-4
32	228863_at	213348_at	N33167	CDKN1C	0.547957	6.856756e-8	4.755229e-3	1.486009e-4
33	228863_at	209487_at	D84109	RBPMS	0.547595	7.022023e-8	4.869843e-3	1.475710e-4
34	228863_at	203910_at	NM_004815	ARHGAP29	0.547492	7.070187e-8	4.903245e-3	1.442131e-4
35	228863_at	201325_s_at	NM_001423	EMP1	0.547032	7.287223e-8	5.053762e-3	1.443932e-4
36	228863_at	210519_s_at	BC000906	NQO1	0.545878	7.860120e-8	5.451072e-3	1.514187e-4
37	227289_at	213551_x_at	AI744229		0.545576	8.017040e-8	5.559897e-3	1.502675e-4
38	227289_at	205656_at	NM_014459	PCDH17	0.545277	8.175184e-8	5.669572e-3	1.491993e-4
39	205656_at	227289_at	AU119437	PCDH17	0.545277	8.175184e-8	5.669572e-3	1.453736e-4
40	228863_at	219440_at	NM_021785	RAI2	0.544750	8.461622e-8	5.868219e-3	1.467055e-4
41	228863_at	215314_at	AU146646	ANK3	0.543935	8.922452e-8	6.187810e-3	1.509222e-4
42	228863_at	211340_s_at	M28882	MCAM	0.543200	9.359367e-8	6.490815e-3	1.545432e-4
43	228863_at	201324_at	NM_001423	EMP1	0.542792	9.610242e-8	6.664799e-3	1.549953e-4
44	228863_at	201289_at	NM_001554	CYR61	0.541672	1.033248e-7	7.165681e-3	1.628564e-4
45	228863_at	222450_at	AL035541	PMEPA1	0.540967	1.081280e-7	7.498784e-3	1.666396e-4
46	228863_at	203038_at	NM_002844	PTPRK	0.540303	1.128475e-7	7.826090e-3	1.701324e-4
47	228863_at	204036_at	AW269335	LPAR1	0.539637	1.177817e-7	8.168276e-3	1.737931e-4
48	228863_at	201578_at	NM_005397	PODXL	0.539411	1.195017e-7	8.287565e-3	1.726576e-4
49	228863_at	236262_at	AA025351	MMRN2	0.539046	1.223301e-7	8.483715e-3	1.731370e-4
50	228863_at	214239_x_at	AI560455	PCGF2	0.538939	1.231727e-7	8.542150e-3	1.708430e-4

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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