[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5701	205930_at	NM_005513	GTF2E1		general transcription factor IIE, polypeptide 1, alpha 56kDa

Fetching correlation data, please wait...
Getting list of correlations for id 5701.
Getting list of p-values for id 5701.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.147 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	205930_at	1554014_at	BC007347	CHD2	0.757244	7.776880e-17	1.797781e-12	1.797781e-12
2	205930_at	1569679_at	BQ888257	CDH22	-0.725301	6.070883e-15	1.403406e-10	7.017030e-11
3	205930_at	218241_at	NM_005113	GOLGA5	0.715346	2.088404e-14	4.827765e-10	1.609255e-10
4	205930_at	223056_s_at	AF298880	XPO5	0.709655	4.134491e-14	9.557702e-10	2.389426e-10
5	205930_at	222216_s_at	AK026857	MRPL17	0.709460	4.231443e-14	9.781828e-10	1.956366e-10
6	205930_at	213571_s_at	BF516289	EIF4E2	0.709151	4.389114e-14	1.014632e-9	1.691053e-10
7	205930_at	222867_s_at	AV760596	MED31	0.708591	4.689444e-14	1.084059e-9	1.548656e-10
8	205930_at	1554572_a_at	BC029360	SUV39H2	0.701433	1.078088e-13	2.492216e-9	3.115269e-10
9	205930_at	208941_s_at	BC000941	SEPHS1	0.700589	1.187355e-13	2.744808e-9	3.049786e-10
10	205930_at	213440_at	AL530264	RAB1A	0.699170	1.395639e-13	3.226300e-9	3.226300e-10
11	205930_at	202522_at	AL031591	PITPNB	0.697548	1.676700e-13	3.876027e-9	3.523661e-10
12	205930_at	225695_at	BG497776	C2orf18	0.697136	1.756434e-13	4.060349e-9	3.383624e-10
13	205930_at	214733_s_at	AL031427	YIPF1	0.691415	3.319734e-13	7.674229e-9	5.903253e-10
14	205930_at	212861_at	BF690150	MFSD5	0.690212	3.788404e-13	8.757654e-9	6.255467e-10
15	205930_at	227254_at	N56956	POU2F1	0.688253	4.690450e-13	1.084291e-8	7.228609e-10
16	205930_at	219770_at	NM_024659	GTDC1	0.686961	5.395378e-13	1.247250e-8	7.795309e-10
17	205930_at	212880_at	AB011113	WDR7	0.685056	6.623396e-13	1.531130e-8	9.006649e-10
18	205930_at	214672_at	AB023215	TTLL5	0.684927	6.715722e-13	1.552474e-8	8.624853e-10
19	205930_at	206896_s_at	NM_005145	GNG7	0.684005	7.411568e-13	1.713332e-8	9.017537e-10
20	205930_at	223526_at	AF277189	C18orf21	0.683950	7.455647e-13	1.723522e-8	8.617610e-10
21	205930_at	223109_at	BC001457	TRUB2	0.682724	8.495417e-13	1.963886e-8	9.351836e-10
22	205930_at	219809_at	NM_017706	WDR55	0.682436	8.759034e-13	2.024826e-8	9.203754e-10
23	205930_at	219162_s_at	NM_016050	MRPL11	0.682397	8.795051e-13	2.033152e-8	8.839791e-10
24	205930_at	211724_x_at	BC005883	MIOS	0.680419	1.084043e-12	2.505982e-8	1.044159e-9
25	205930_at	218046_s_at	NM_016065	MRPS16	0.680325	1.094913e-12	2.531111e-8	1.012444e-9
26	205930_at	201594_s_at	NM_005134	PPP4R1	0.679771	1.160482e-12	2.682686e-8	1.031802e-9
27	205930_at	219539_at	NM_024775	GEMIN6	0.679543	1.188677e-12	2.747865e-8	1.017728e-9
28	205930_at	202868_s_at	NM_006627	POP4	0.678654	1.304691e-12	3.016054e-8	1.077162e-9
29	205930_at	225492_at	BG500396	TMEM33	0.678422	1.336645e-12	3.089921e-8	1.065490e-9
30	205930_at	209565_at	BC000832	RNF113A	0.678102	1.382034e-12	3.194847e-8	1.064949e-9
31	205930_at	223480_s_at	AI189156	MRPL47	0.675935	1.731144e-12	4.001887e-8	1.290931e-9
32	205930_at	219470_x_at	NM_019084	CCNJ	0.674235	2.062670e-12	4.768273e-8	1.490085e-9
33	205930_at	218735_s_at	AA349848	ZNF544	0.672606	2.437354e-12	5.634432e-8	1.707404e-9
34	205930_at	227493_s_at	AI863484	KIAA1143	0.672425	2.483014e-12	5.739983e-8	1.688230e-9
35	205930_at	211595_s_at	AB049944	MRPS11	0.670297	3.082522e-12	7.125866e-8	2.035962e-9
36	205930_at	228611_s_at	BF197274		0.669778	3.248628e-12	7.509854e-8	2.086071e-9
37	205930_at	223154_at	AF212225	MRPL1	0.668029	3.874068e-12	8.955684e-8	2.420455e-9
38	205930_at	232652_x_at	AF207829	SCAND1	0.667100	4.251826e-12	9.828947e-8	2.586565e-9
39	205930_at	1553978_at	BC010931	LOC729991	0.666142	4.678440e-12	1.081515e-7	2.773115e-9
40	205930_at	219286_s_at	NM_022768	RBM15	0.665788	4.846294e-12	1.120318e-7	2.800794e-9
41	205930_at	209509_s_at	BC000325	DPAGT1	0.665105	5.186479e-12	1.198958e-7	2.924289e-9
42	205930_at	221539_at	AB044548	EIF4EBP1	0.664383	5.571468e-12	1.287956e-7	3.066563e-9
43	205930_at	212108_at	AB020694	FAF2	0.661551	7.362701e-12	1.702036e-7	3.958222e-9
44	205930_at	215722_s_at	AJ130971	SNRPA1	0.661146	7.659748e-12	1.770704e-7	4.024327e-9
45	205930_at	214437_s_at	NM_005412	SHMT2	0.661144	7.661486e-12	1.771106e-7	3.935791e-9
46	205930_at	218575_at	NM_022662	ANAPC1	0.660588	8.088950e-12	1.869923e-7	4.065049e-9
47	205930_at	223110_at	BC003701	KIAA1429	0.660304	8.316225e-12	1.922462e-7	4.090344e-9
48	205930_at	224986_s_at	AL040394	PDPK1	0.660038	8.533996e-12	1.972804e-7	4.110008e-9
49	205930_at	223219_s_at	BC002931	CNOT10	0.660029	8.541614e-12	1.974565e-7	4.029724e-9
50	205930_at	221021_s_at	NM_030877	CTNNBL1	0.658972	9.465444e-12	2.188127e-7	4.376253e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation