[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
3558	202680_at	NM_002095	GTF2E2		general transcription factor IIE, polypeptide 2, beta 34kDa

Fetching correlation data, please wait...
Getting list of correlations for id 3558.
Getting list of p-values for id 3558.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.139 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	202680_at	204297_at	NM_002647	PIK3C3	0.689898	3.920880e-13	9.063899e-9	9.063899e-9
2	202680_at	238480_at	AI871745	TTC39C	0.651170	1.994656e-11	4.611047e-7	2.305524e-7
3	202680_at	226298_at	BE394201	RUNDC1	0.646516	3.080035e-11	7.120118e-7	2.373373e-7
4	202680_at	41329_at	AI458463	SCYL3	0.638121	6.619893e-11	1.530321e-6	3.825801e-7
5	202680_at	206583_at	NM_017776	ZNF673	0.632103	1.129489e-10	2.611039e-6	5.222078e-7
6	202680_at	229640_x_at	AW439242		0.627949	1.622397e-10	3.750495e-6	6.250824e-7
7	202680_at	218527_at	NM_017692	APTX	0.611412	6.510789e-10	1.505099e-5	2.150142e-6
8	202680_at	226957_x_at	BF433757	RALBP1	0.608495	8.251023e-10	1.907389e-5	2.384236e-6
9	202680_at	222759_at	BC002522	SUV420H1	0.607027	9.286492e-10	2.146758e-5	2.385287e-6
10	202680_at	213302_at	AL044326	PFAS	0.606379	9.782754e-10	2.261479e-5	2.261479e-6
11	202680_at	212910_at	W19873	THAP11	0.606160	9.955601e-10	2.301436e-5	2.092215e-6
12	202680_at	205527_s_at	NM_015487	GEMIN4	0.603807	1.201236e-9	2.776897e-5	2.314081e-6
13	202680_at	218882_s_at	NM_006784	WDR3	0.602489	1.333540e-9	3.082745e-5	2.371343e-6
14	202680_at	205607_s_at	NM_020423	SCYL3	0.601015	1.498050e-9	3.463042e-5	2.473601e-6
15	202680_at	211678_s_at	AF090934	RNF114	0.600867	1.515689e-9	3.503818e-5	2.335879e-6
16	202680_at	219258_at	NM_017858	TIPIN	0.599606	1.673422e-9	3.868451e-5	2.417782e-6
17	202680_at	218615_s_at	NM_018266	TMEM39A	0.595547	2.294618e-9	5.304468e-5	3.120275e-6
18	202680_at	215165_x_at	AL080099	UMPS	0.593207	2.747296e-9	6.350925e-5	3.528292e-6
19	202680_at	226562_at	BE622486	ZSCAN29	0.591382	3.158499e-9	7.301501e-5	3.842896e-6
20	202680_at	201323_at	NM_006824	EBNA1BP2	0.590164	3.464852e-9	8.009698e-5	4.004849e-6
21	202680_at	203721_s_at	NM_016001	UTP18	0.589632	3.607300e-9	8.338995e-5	3.970950e-6
22	202680_at	226619_at	AW665440	SENP1	0.589497	3.644343e-9	8.424628e-5	3.829377e-6
23	202680_at	225493_at	AI052701	LOC144438	0.587751	4.157341e-9	9.610526e-5	4.178490e-6
24	202680_at	229285_at	AI669749	RNASEL	0.587097	4.367047e-9	1.009530e-4	4.206376e-6
25	202680_at	226513_at	AW003222	ASB7	0.586072	4.715503e-9	1.090083e-4	4.360331e-6
26	202680_at	57516_at	AA746290	ZNF764	0.585950	4.758811e-9	1.100094e-4	4.231132e-6
27	202680_at	218470_at	NM_015936	YARS2	0.583829	5.573355e-9	1.288393e-4	4.771824e-6
28	202680_at	225343_at	AK025695	TMED8	0.583435	5.738716e-9	1.326619e-4	4.737925e-6
29	202680_at	226261_at	AI831561	ZNRF2	0.583327	5.784793e-9	1.337271e-4	4.611278e-6
30	202680_at	208940_at	AI885670	SEPHS1	0.582858	5.989238e-9	1.384532e-4	4.615107e-6
31	202680_at	213127_s_at	BG230758	MED8	0.582601	6.104356e-9	1.411144e-4	4.552077e-6
32	202680_at	208794_s_at	D26156	SMARCA4	0.581954	6.403058e-9	1.480195e-4	4.625609e-6
33	202680_at	219857_at	NM_024889	C10orf81	0.581051	6.843142e-9	1.581929e-4	4.793725e-6
34	202680_at	213145_at	BF001666	FBXL14	0.578454	8.276773e-9	1.913342e-4	5.627475e-6
35	202680_at	218646_at	NM_017867	C4orf27	0.578233	8.410623e-9	1.944284e-4	5.555096e-6
36	202680_at	204977_at	NM_004398	DDX10	0.578232	8.411605e-9	1.944511e-4	5.401419e-6
37	202680_at	209527_at	BC000747	EXOSC2	0.578218	8.420337e-9	1.946529e-4	5.260890e-6
38	202680_at	213625_at	AW190088	ZKSCAN4	0.575181	1.049341e-8	2.425763e-4	6.383586e-6
39	202680_at	219826_at	NM_024691	ZNF419	0.574461	1.105182e-8	2.554849e-4	6.550894e-6
40	202680_at	227211_at	BE544837	PHF19	0.574107	1.133660e-8	2.620682e-4	6.551704e-6
41	202680_at	200961_at	NM_012248	SEPHS2	0.573997	1.142624e-8	2.641403e-4	6.442446e-6
42	202680_at	222754_at	BE552215	TRNT1	0.573823	1.157055e-8	2.674764e-4	6.368487e-6
43	202680_at	202193_at	NM_005569	LIMK2	0.573696	1.167624e-8	2.699196e-4	6.277201e-6
44	202680_at	229968_at	AA504245		0.572841	1.241347e-8	2.869622e-4	6.521868e-6
45	202680_at	1729_at	L41690	TRADD	0.572495	1.272515e-8	2.941673e-4	6.537051e-6
46	202680_at	231878_at	AK026112	C16orf53	0.572463	1.275368e-8	2.948267e-4	6.409276e-6
47	202680_at	207513_s_at	NM_003452	ZNF189	0.571351	1.380644e-8	3.191636e-4	6.790715e-6
48	202680_at	227109_at	AV700558	CYP2R1	0.570889	1.426776e-8	3.298278e-4	6.871412e-6
49	202680_at	231763_at	BG330541	POLR3A	0.569281	1.599045e-8	3.696512e-4	7.543903e-6
50	202680_at	208715_at	BF002031	TMCO1	0.567036	1.873022e-8	4.329864e-4	8.659729e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation