[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
7296	209595_at	BC001771	GTF2F2		general transcription factor IIF, polypeptide 2, 30kDa

Fetching correlation data, please wait...
Getting list of correlations for id 7296.
Getting list of p-values for id 7296.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.159 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	209595_at	201705_at	NM_002811	PSMD7	0.704060	7.965283e-14	1.841334e-9	1.841334e-9
2	209595_at	206158_s_at	NM_003418	CNBP	0.672499	2.464260e-12	5.696630e-8	2.848315e-8
3	209595_at	221656_s_at	BC003073	ARHGEF10L	0.662653	6.607824e-12	1.527531e-7	5.091769e-8
4	209595_at	243_g_at	M64571	MAP4	0.662396	6.776968e-12	1.566632e-7	3.916579e-8
5	209595_at	203006_at	NM_005539	INPP5A	0.661857	7.144728e-12	1.651647e-7	3.303293e-8
6	209595_at	203230_at	AF006011	DVL1	0.658169	1.023032e-11	2.364943e-7	3.941571e-8
7	209595_at	223492_s_at	BC004958	LRRFIP1	0.657334	1.108887e-11	2.563413e-7	3.662019e-8
8	209595_at	217722_s_at	NM_016645	NGRN	0.656118	1.246409e-11	2.881324e-7	3.601655e-8
9	209595_at	219116_s_at	NM_018185	DCUN1D2	0.652563	1.748911e-11	4.042959e-7	4.492176e-8
10	209595_at	214475_x_at	AF127764	CAPN3	0.651535	1.927305e-11	4.455352e-7	4.455352e-8
11	209595_at	230029_x_at	AI708334	UBR3	0.649205	2.398479e-11	5.544564e-7	5.040513e-8
12	209595_at	202646_s_at	AA167775	CSDE1	0.648491	2.563795e-11	5.926725e-7	4.938938e-8
13	209595_at	202263_at	NM_016243	CYB5R1	0.647366	2.846650e-11	6.580601e-7	5.062001e-8
14	209595_at	225213_at	AW300598	PPTC7	0.647297	2.865120e-11	6.623299e-7	4.730928e-8
15	209595_at	210944_s_at	BC003169	CAPN3	0.644361	3.756983e-11	8.685017e-7	5.790012e-8
16	209595_at	204491_at	R40917	PDE4D	0.644035	3.871127e-11	8.948884e-7	5.593053e-8
17	209595_at	218003_s_at	NM_002013	FKBP3	0.643644	4.012450e-11	9.275580e-7	5.456224e-8
18	209595_at	204045_at	NM_004780	TCEAL1	0.642838	4.319332e-11	9.985001e-7	5.547223e-8
19	209595_at	209814_at	BC004421	ZNF330	0.642264	4.551409e-11	1.052149e-6	5.537628e-8
20	209595_at	217408_at	AL050361	MRPS18B	0.641954	4.681584e-11	1.082242e-6	5.411209e-8
21	209595_at	202565_s_at	NM_003174	SVIL	0.639265	5.972499e-11	1.380663e-6	6.574584e-8
22	209595_at	208767_s_at	AW149681	LAPTM4B	0.638626	6.326628e-11	1.462527e-6	6.647848e-8
23	209595_at	202761_s_at	NM_015180	SYNE2	0.636870	7.404947e-11	1.711802e-6	7.442616e-8
24	209595_at	205412_at	NM_000019	ACAT1	0.635038	8.716734e-11	2.015047e-6	8.396031e-8
25	209595_at	212038_s_at	AL515918	VDAC1	0.633256	1.020559e-10	2.359226e-6	9.436904e-8
26	209595_at	214179_s_at	H93013	NFE2L1	0.633014	1.042563e-10	2.410093e-6	9.269590e-8
27	209595_at	225570_at	AW439816	SLC41A1	0.633003	1.043511e-10	2.412284e-6	8.934385e-8
28	209595_at	217781_s_at	NM_022473	ZFP106	0.632012	1.138526e-10	2.631931e-6	9.399753e-8
29	209595_at	217908_s_at	NM_018442	DCAF6	0.629784	1.383461e-10	3.198147e-6	1.102809e-7
30	209595_at	225623_at	AI621225	KIAA1737	0.628847	1.500856e-10	3.469529e-6	1.156510e-7
31	209595_at	218536_at	AF052167	MRS2	0.626447	1.846867e-10	4.269402e-6	1.377226e-7
32	209595_at	212566_at	AL523310	MAP4	0.626075	1.906827e-10	4.408011e-6	1.377503e-7
33	209595_at	200759_x_at	NM_003204	NFE2L1	0.625750	1.960791e-10	4.532761e-6	1.373564e-7
34	209595_at	211890_x_at	AF127765	CAPN3	0.624067	2.264659e-10	5.235212e-6	1.539768e-7
35	209595_at	214039_s_at	T15777	LAPTM4B	0.623313	2.414997e-10	5.582750e-6	1.595071e-7
36	209595_at	212427_at	AB002366	KIAA0368	0.620662	3.022987e-10	6.988239e-6	1.941177e-7
37	209595_at	235072_s_at	BF594695		0.620469	3.072514e-10	7.102730e-6	1.919657e-7
38	209595_at	225030_at	AA824341	BOD1	0.618835	3.524600e-10	8.147818e-6	2.144163e-7
39	209595_at	202566_s_at	AF051851	SVIL	0.618345	3.672009e-10	8.488584e-6	2.176560e-7
40	209595_at	212428_at	AW001101	KIAA0368	0.617229	4.030540e-10	9.317400e-6	2.329350e-7
41	209595_at	212567_s_at	AL523310	MAP4	0.615232	4.757234e-10	1.099730e-5	2.682268e-7
42	209595_at	224281_s_at	AF225423	NGRN	0.615038	4.834077e-10	1.117493e-5	2.660699e-7
43	209595_at	227970_at	AK026883	GPR157	0.614994	4.851729e-10	1.121574e-5	2.608312e-7
44	209595_at	201975_at	NM_002956	CLIP1	0.612705	5.857600e-10	1.354101e-5	3.077503e-7
45	209595_at	211985_s_at	AI653730	CALM1	0.611995	6.208185e-10	1.435146e-5	3.189214e-7
46	209595_at	218168_s_at	NM_020247	CABC1	0.611647	6.386936e-10	1.476468e-5	3.209713e-7
47	209595_at	226607_at	AI498144	C20orf194	0.611062	6.699324e-10	1.548683e-5	3.295070e-7
48	209595_at	213150_at	BF792917	HOXA10	0.609583	7.555491e-10	1.746603e-5	3.638756e-7
49	209595_at	227870_at	AB046848	IGDCC4	0.609502	7.605240e-10	1.758103e-5	3.587966e-7
50	209595_at	200758_s_at	AI361227	NFE2L1	0.608397	8.316458e-10	1.922516e-5	3.845031e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation