[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
14519	223758_s_at	BC005345	GTF2H2		general transcription factor IIH, polypeptide 2, 44kDa

Fetching correlation data, please wait...
Getting list of correlations for id 14519.
Getting list of p-values for id 14519.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.121 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	223758_s_at	200712_s_at	AI633566	MAPRE1	0.693205	2.724640e-13	6.298551e-9	6.298551e-9
2	223758_s_at	222406_s_at	AV738970		0.691006	3.472639e-13	8.027700e-9	4.013850e-9
3	223758_s_at	208721_s_at	BF967271	ANAPC5	0.690306	3.749469e-13	8.667648e-9	2.889216e-9
4	223758_s_at	220800_s_at	NM_014547	TMOD3	0.677742	1.434885e-12	3.317023e-8	8.292557e-9
5	223758_s_at	200744_s_at	AI741124	GNB1	0.671802	2.645693e-12	6.116048e-8	1.223210e-8
6	223758_s_at	200751_s_at	BE898861	HNRNPC	0.667276	4.177770e-12	9.657751e-8	1.609625e-8
7	223758_s_at	211307_s_at	U43677	FCAR	0.665576	4.949690e-12	1.144220e-7	1.634600e-8
8	223758_s_at	200806_s_at	BE256479	HSPD1	0.665472	5.001054e-12	1.156094e-7	1.445117e-8
9	223758_s_at	208055_s_at	NM_015601	HERC4	0.663382	6.150254e-12	1.421754e-7	1.579727e-8
10	223758_s_at	208351_s_at	NM_002745	MAPK1	0.662982	6.397306e-12	1.478865e-7	1.478865e-8
11	223758_s_at	1554145_a_at	BC040721	KLRAQ1	0.662443	6.745408e-12	1.559336e-7	1.417578e-8
12	223758_s_at	1558015_s_at	BU175810	ACTR2	0.660843	7.890105e-12	1.823956e-7	1.519963e-8
13	223758_s_at	210178_x_at	AF047448	SRSF10	0.660566	8.106065e-12	1.873879e-7	1.441445e-8
14	223758_s_at	213548_s_at	BG257762	CDV3	0.656696	1.179130e-11	2.725794e-7	1.946996e-8
15	223758_s_at	1554441_a_at	AF479418	WAPAL	0.656562	1.194414e-11	2.761126e-7	1.840751e-8
16	223758_s_at	209772_s_at	X69397	CD24	0.654679	1.430304e-11	3.306435e-7	2.066522e-8
17	223758_s_at	241366_at	BE618393	RBAK	0.654456	1.461095e-11	3.377614e-7	1.986832e-8
18	223758_s_at	223584_s_at	BF000166	KBTBD2	0.652917	1.691300e-11	3.909778e-7	2.172099e-8
19	223758_s_at	1555467_a_at	AF267533	CELF1	0.652076	1.831300e-11	4.233416e-7	2.228114e-8
20	223758_s_at	201571_s_at	AI656493	DCTD	0.652004	1.843915e-11	4.262579e-7	2.131289e-8
21	223758_s_at	210156_s_at	D25547	PCMT1	0.651950	1.853264e-11	4.284190e-7	2.040090e-8
22	223758_s_at	218129_s_at	NM_006166	NFYB	0.651331	1.964615e-11	4.541601e-7	2.064364e-8
23	223758_s_at	203676_at	NM_002076	GNS	0.650742	2.076594e-11	4.800462e-7	2.087157e-8
24	223758_s_at	1555797_a_at	AF017807	ARPC5	0.647838	2.724465e-11	6.298146e-7	2.624227e-8
25	223758_s_at	221194_s_at	NM_016125	RNFT1	0.645319	3.439979e-11	7.952200e-7	3.180880e-8
26	223758_s_at	202816_s_at	AW292882	SS18	0.645263	3.457876e-11	7.993572e-7	3.074451e-8
27	223758_s_at	224046_s_at	U67932	PDE7A	0.644527	3.700214e-11	8.553785e-7	3.168069e-8
28	223758_s_at	201504_s_at	AI435302	TSN	0.644129	3.837776e-11	8.871787e-7	3.168495e-8
29	223758_s_at	200892_s_at	BC000451	TRA2B	0.643674	4.001478e-11	9.250216e-7	3.189730e-8
30	223758_s_at	228295_at	AI703131	WDR59	0.641705	4.788786e-11	1.107024e-6	3.690079e-8
31	223758_s_at	211450_s_at	D89646	MSH6	0.641325	4.957373e-11	1.145996e-6	3.696761e-8
32	223758_s_at	207782_s_at	NM_007319	PSEN1	0.640872	5.165100e-11	1.194016e-6	3.731301e-8
33	223758_s_at	200008_s_at	D13988	GDI2	0.640793	5.202274e-11	1.202610e-6	3.644272e-8
34	223758_s_at	214975_s_at	AK001816	MTMR1	0.640711	5.241264e-11	1.211623e-6	3.563597e-8
35	223758_s_at	1554747_a_at	BC033559	SEPT2	0.639864	5.658593e-11	1.308097e-6	3.737420e-8
36	223758_s_at	201946_s_at	AL545982	CCT2	0.639819	5.681728e-11	1.313445e-6	3.648458e-8
37	223758_s_at	212162_at	AK022873	KIDINS220	0.639692	5.747126e-11	1.328563e-6	3.590711e-8
38	223758_s_at	216985_s_at	AJ002077	STX3	0.639389	5.906548e-11	1.365417e-6	3.593202e-8
39	223758_s_at	242679_at	AU127120		0.639009	6.111913e-11	1.412891e-6	3.622797e-8
40	223758_s_at	201772_at	NM_015878	AZIN1	0.638150	6.602574e-11	1.526317e-6	3.815793e-8
41	223758_s_at	214544_s_at	NM_003825	SNAP23	0.637997	6.693865e-11	1.547421e-6	3.774197e-8
42	223758_s_at	201856_s_at	BC000376	ZFR	0.637493	7.003254e-11	1.618942e-6	3.854624e-8
43	223758_s_at	208840_s_at	AU149503	G3BP2	0.636598	7.586574e-11	1.753788e-6	4.078578e-8
44	223758_s_at	224311_s_at	AF151824	CAB39	0.636353	7.754397e-11	1.792584e-6	4.074055e-8
45	223758_s_at	208811_s_at	AF080569		0.635853	8.107853e-11	1.874292e-6	4.165094e-8
46	223758_s_at	209131_s_at	U55936	SNAP23	0.635729	8.197519e-11	1.895020e-6	4.119610e-8
47	223758_s_at	208852_s_at	AI761759	CANX	0.635355	8.474600e-11	1.959073e-6	4.168241e-8
48	223758_s_at	202199_s_at	AW082913	SRPK1	0.633997	9.559184e-11	2.209797e-6	4.603743e-8
49	223758_s_at	201686_x_at	AF229254	API5	0.633413	1.006523e-10	2.326779e-6	4.748530e-8
50	223758_s_at	216915_s_at	S69182	PTPN12	0.632871	1.055750e-10	2.440578e-6	4.881156e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation