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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
6147	207459_x_at	NM_002100	GYPB		glycophorin B (MNS blood group)
10004	214407_x_at	AI240545	GYPB		glycophorin B (MNS blood group)

Fetching correlation data, please wait...
Getting list of correlations for id 6147.
Getting list of p-values for id 6147.
1 of 2 done.
Getting list of correlations for id 10004.
Getting list of p-values for id 10004.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.219 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	214407_x_at	216833_x_at	U05255		0.969813	5.018546e-52	2.320275e-47	2.320275e-47
2	207459_x_at	216833_x_at	U05255		0.961617	8.077535e-48	3.734568e-43	1.867284e-43
3	214407_x_at	207459_x_at	NM_002100	GYPB	0.951291	1.147840e-43	5.306921e-39	1.768974e-39
4	207459_x_at	214407_x_at	AI240545	GYPB	0.951291	1.147840e-43	5.306921e-39	1.326730e-39
5	214407_x_at	207854_at	NM_002102	GYPE	0.729757	3.431115e-15	1.586342e-10	3.172684e-11
6	214407_x_at	211821_x_at	U00178	GYPA	0.706524	5.978900e-14	2.764285e-9	4.607141e-10
7	207459_x_at	207854_at	NM_002102	GYPE	0.658934	9.500171e-12	4.392309e-7	6.274727e-8
8	214407_x_at	1554423_a_at	AF233225	FBXO7	0.618191	3.719553e-10	1.719698e-5	2.149623e-6
9	214407_x_at	234980_at	AI004375	TMEM56	0.615791	4.541891e-10	2.099898e-5	2.333220e-6
10	214407_x_at	223084_s_at	AF246144	CCNDBP1	0.611230	6.608437e-10	3.055345e-5	3.055345e-6
11	214407_x_at	223670_s_at	AF322875	HEMGN	0.609784	7.432909e-10	3.436531e-5	3.124119e-6
12	214407_x_at	208901_s_at	J03250	TOP1	0.607330	9.063223e-10	4.190291e-5	3.491909e-6
13	214407_x_at	221627_at	AF220123	TRIM10	0.607150	9.195145e-10	4.251283e-5	3.270218e-6
14	214407_x_at	223266_at	AB038950	STRADB	0.606722	9.517204e-10	4.400184e-5	3.142989e-6
15	214407_x_at	212166_at	H38643	XPO7	0.604048	1.178439e-9	5.448396e-5	3.632264e-6
16	214407_x_at	216317_x_at	X63095	RHCE	0.599992	1.623455e-9	7.505882e-5	4.691176e-6
17	207459_x_at	216317_x_at	X63095	RHCE	0.598198	1.867955e-9	8.636302e-5	5.080178e-6
18	214407_x_at	215819_s_at	N53959		0.594487	2.490081e-9	1.151264e-4	6.395910e-6
19	214407_x_at	211546_x_at	L36674	SNCA	0.591138	3.217628e-9	1.487638e-4	7.829675e-6
20	214407_x_at	202459_s_at	U55968	LPIN2	0.589682	3.593690e-9	1.661507e-4	8.307533e-6
21	207459_x_at	211821_x_at	U00178	GYPA	0.589271	3.707212e-9	1.713992e-4	8.161868e-6
22	214407_x_at	202974_at	NM_002436	MPP1	0.585657	4.863992e-9	2.248818e-4	1.022190e-5
23	214407_x_at	208971_at	M14016	UROD	0.583585	5.675212e-9	2.623878e-4	1.140816e-5
24	214407_x_at	225388_at	AI928507	TSPAN5	0.583029	5.913739e-9	2.734158e-4	1.139233e-5
25	214407_x_at	201178_at	NM_012179	FBXO7	0.582802	6.013897e-9	2.780465e-4	1.112186e-5
26	214407_x_at	210586_x_at	AF312679	RHD	0.579063	7.916885e-9	3.660292e-4	1.407805e-5
27	214407_x_at	225387_at	AA059445	TSPAN5	0.578245	8.403627e-9	3.885333e-4	1.439012e-5
28	214407_x_at	207828_s_at	NM_005196	CENPF	0.578193	8.435148e-9	3.899906e-4	1.392824e-5
29	214407_x_at	221479_s_at	AF060922	BNIP3L	0.578142	8.466985e-9	3.914626e-4	1.349871e-5
30	214407_x_at	203554_x_at	NM_004219	PTTG1	0.577381	8.948992e-9	4.137477e-4	1.379159e-5
31	207459_x_at	234980_at	AI004375	TMEM56	0.576526	9.521278e-9	4.402068e-4	1.420022e-5
32	214407_x_at	217736_s_at	NM_014413	EIF2AK1	0.576460	9.566538e-9	4.422993e-4	1.382185e-5
33	214407_x_at	213288_at	AI761250	MBOAT2	0.575442	1.029771e-8	4.761042e-4	1.442740e-5
34	214407_x_at	204026_s_at	NM_007057	ZWINT	0.574136	1.131298e-8	5.230443e-4	1.538366e-5
35	214407_x_at	223229_at	AB032931	UBE2T	0.573625	1.173603e-8	5.426038e-4	1.550297e-5
36	214407_x_at	207827_x_at	L36675	SNCA	0.572402	1.280932e-8	5.922263e-4	1.645073e-5
37	214407_x_at	213256_at	AW593996	MARCH3	0.571748	1.342134e-8	6.205224e-4	1.677088e-5
38	207459_x_at	213256_at	AW593996	MARCH3	0.570461	1.470851e-8	6.800334e-4	1.789562e-5
39	214407_x_at	203966_s_at	NM_021003	PPM1A	0.569735	1.548568e-8	7.159650e-4	1.835808e-5
40	214407_x_at	205838_at	NM_002099		0.569719	1.550252e-8	7.167436e-4	1.791859e-5
41	214407_x_at	218107_at	NM_025160	WDR26	0.569075	1.622528e-8	7.501594e-4	1.829657e-5
42	207459_x_at	201178_at	NM_012179	FBXO7	0.566243	1.980070e-8	9.154657e-4	2.179680e-5
43	214407_x_at	204466_s_at	BG260394	SNCA	0.566161	1.991515e-8	9.207572e-4	2.141296e-5
44	207459_x_at	221627_at	AF220123	TRIM10	0.565230	2.125376e-8	9.826462e-4	2.233287e-5
45	207459_x_at	212166_at	H38643	XPO7	0.564215	2.281065e-8	1.054627e-3	2.343617e-5
46	207459_x_at	223266_at	AB038950	STRADB	0.563474	2.401395e-8	1.110261e-3	2.413610e-5
47	214407_x_at	216241_s_at	X57198	TCEA1	0.562928	2.493964e-8	1.153060e-3	2.453318e-5
48	214407_x_at	217879_at	AL566824	CDC27	0.562192	2.624298e-8	1.213318e-3	2.527745e-5
49	207459_x_at	223084_s_at	AF246144	CCNDBP1	0.562092	2.642521e-8	1.221743e-3	2.493354e-5
50	207459_x_at	208901_s_at	J03250	TOP1	0.561462	2.759811e-8	1.275971e-3	2.551942e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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