[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
3393	202474_s_at	NM_005334	HCFC1		host cell factor C1 (VP16-accessory protein)

Fetching correlation data, please wait...
Getting list of correlations for id 3393.
Getting list of p-values for id 3393.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.141 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	202474_s_at	45749_at	AA400206	FAM65A	0.836909	3.598465e-23	8.318573e-19	8.318573e-19
2	202474_s_at	225650_at	BF207100	SAMD1	0.833072	8.607258e-23	1.989740e-18	9.948700e-19
3	202474_s_at	224715_at	BG338983	WDR34	0.819480	1.596134e-21	3.689783e-17	1.229928e-17
4	202474_s_at	204767_s_at	BC000323	FEN1	0.814201	4.647649e-21	1.074397e-16	2.685992e-17
5	202474_s_at	202726_at	NM_000234	LIG1	0.810300	1.002183e-20	2.316747e-16	4.633493e-17
6	202474_s_at	203422_at	NM_002691	POLD1	0.807200	1.822495e-20	4.213062e-16	7.021770e-17
7	202474_s_at	205436_s_at	NM_002105	H2AFX	0.803967	3.361912e-20	7.771733e-16	1.110248e-16
8	202474_s_at	208117_s_at	NM_031206	LAS1L	0.803545	3.638049e-20	8.410078e-16	1.051260e-16
9	202474_s_at	216237_s_at	AA807529	MCM5	0.803457	3.698394e-20	8.549578e-16	9.499531e-17
10	202474_s_at	210446_at	M30601	GATA1	0.802719	4.244931e-20	9.813007e-16	9.813007e-17
11	202474_s_at	214426_x_at	BF062223	CHAF1A	0.796149	1.411418e-19	3.262775e-15	2.966159e-16
12	202474_s_at	212100_s_at	Z93241	POLDIP3	0.795382	1.619168e-19	3.743031e-15	3.119192e-16
13	202474_s_at	200960_x_at	NM_007096	CLTA	0.794617	1.855803e-19	4.290061e-15	3.300047e-16
14	202474_s_at	218308_at	NM_006342	TACC3	0.794446	1.913449e-19	4.423320e-15	3.159515e-16
15	202474_s_at	213360_s_at	AA514622		0.793998	2.071569e-19	4.788845e-15	3.192563e-16
16	202474_s_at	216306_x_at	X62006	PTBP1	0.793958	2.086630e-19	4.823662e-15	3.014789e-16
17	202474_s_at	203718_at	NM_006702	PNPLA6	0.793466	2.276565e-19	5.262736e-15	3.095727e-16
18	202474_s_at	200990_at	NM_005762	TRIM28	0.788292	5.612190e-19	1.297370e-14	7.207611e-16
19	202474_s_at	205423_at	NM_001127	AP1B1	0.786901	7.122929e-19	1.646607e-14	8.666355e-16
20	202474_s_at	207856_s_at	NM_017951		0.786817	7.225434e-19	1.670304e-14	8.351518e-16
21	202474_s_at	201715_s_at	NM_014977	ACIN1	0.786520	7.599760e-19	1.756836e-14	8.365888e-16
22	202474_s_at	206845_s_at	NM_014771	RNF40	0.785852	8.515212e-19	1.968462e-14	8.947553e-16
23	202474_s_at	209764_at	AL022312	MGAT3	0.783705	1.223159e-18	2.827577e-14	1.229381e-15
24	202474_s_at	212034_s_at	AB028990	EXOC7	0.782466	1.504970e-18	3.479039e-14	1.449600e-15
25	202474_s_at	218115_at	NM_018154	ASF1B	0.782387	1.524878e-18	3.525060e-14	1.410024e-15
26	202474_s_at	210719_s_at	BC002552	HMG20B	0.781330	1.817732e-18	4.202051e-14	1.616173e-15
27	202474_s_at	204817_at	NM_012291	ESPL1	0.778965	2.683495e-18	6.203435e-14	2.297568e-15
28	202474_s_at	201746_at	NM_000546	TP53	0.777020	3.683455e-18	8.515043e-14	3.041087e-15
29	202474_s_at	215089_s_at	AW409974	RBM10	0.776324	4.122334e-18	9.529600e-14	3.286069e-15
30	202474_s_at	203274_at	NM_012151		0.775347	4.824974e-18	1.115389e-13	3.717964e-15
31	202474_s_at	226569_s_at	AK024476	CHTF18	0.775134	4.992203e-18	1.154048e-13	3.722734e-15
32	202474_s_at	212015_x_at	BF690062	PTBP1	0.774810	5.258894e-18	1.215699e-13	3.799058e-15
33	202474_s_at	211168_s_at	D86988	UPF1	0.774455	5.566418e-18	1.286789e-13	3.899360e-15
34	202474_s_at	201755_at	NM_006739	MCM5	0.773721	6.258333e-18	1.446739e-13	4.255114e-15
35	202474_s_at	201710_at	NM_002466	MYBL2	0.773642	6.337270e-18	1.464987e-13	4.185676e-15
36	202474_s_at	202253_s_at	NM_004945	DNM2	0.767841	1.575105e-17	3.641170e-13	1.011436e-14
37	202474_s_at	1555590_a_at	BC009797	GATA1	0.765451	2.274490e-17	5.257938e-13	1.421064e-14
38	202474_s_at	202188_at	NM_014669	NUP93	0.764632	2.577121e-17	5.957531e-13	1.567771e-14
39	202474_s_at	201255_x_at	NM_004639	BAT3	0.763889	2.885116e-17	6.669523e-13	1.710134e-14
40	202474_s_at	207556_s_at	NM_003646	DGKZ	0.763694	2.971602e-17	6.869451e-13	1.717363e-14
41	202474_s_at	201419_at	NM_004656	BAP1	0.763533	3.045138e-17	7.039446e-13	1.716938e-14
42	202474_s_at	214080_x_at	AI815793	PRKCSH	0.763284	3.161842e-17	7.309231e-13	1.740293e-14
43	202474_s_at	200896_x_at	NM_004494	HDGF	0.763141	3.230955e-17	7.468999e-13	1.736976e-14
44	202474_s_at	201700_at	NM_001760	CCND3	0.762869	3.366611e-17	7.782594e-13	1.768771e-14
45	202474_s_at	204401_at	NM_002250	KCNN4	0.762494	3.562039e-17	8.234365e-13	1.829859e-14
46	202474_s_at	203379_at	NM_002953	RPS6KA1	0.761817	3.943877e-17	9.117061e-13	1.981970e-14
47	202474_s_at	208676_s_at	U87954	PA2G4	0.761394	4.202423e-17	9.714741e-13	2.066966e-14
48	202474_s_at	219862_s_at	NM_012336	NARF	0.761062	4.416099e-17	1.020870e-12	2.126812e-14
49	202474_s_at	91952_at	AI363375	DCAF15	0.761048	4.425343e-17	1.023007e-12	2.087769e-14
50	202474_s_at	210981_s_at	AF040751	GRK6	0.760967	4.479645e-17	1.035560e-12	2.071119e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation