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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
6726	208894_at	M60334	HLA-DRA		major histocompatibility complex, class II, DR alpha
7941	210982_s_at	M60333	HLA-DRA		major histocompatibility complex, class II, DR alpha

Fetching correlation data, please wait...
Getting list of correlations for id 6726.
Getting list of p-values for id 6726.
1 of 2 done.
Getting list of correlations for id 7941.
Getting list of p-values for id 7941.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.206 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	208894_at	210982_s_at	M60333	HLA-DRA	0.949057	6.906910e-43	3.193341e-38	3.193341e-38
2	210982_s_at	208894_at	M60334	HLA-DRA	0.949057	6.906910e-43	3.193341e-38	1.596670e-38
3	210982_s_at	208306_x_at	NM_021983	HLA-DRB4	0.834086	6.849256e-23	3.166685e-18	1.055562e-18
4	210982_s_at	209312_x_at	U65585		0.803564	3.625253e-20	1.676099e-15	4.190248e-16
5	210982_s_at	217478_s_at	X76775		0.793335	2.329707e-19	1.077117e-14	2.154234e-15
6	210982_s_at	215193_x_at	AJ297586		0.790249	4.001129e-19	1.849882e-14	3.083137e-15
7	208894_at	209312_x_at	U65585		0.781341	1.814233e-18	8.387926e-14	1.198275e-14
8	210982_s_at	211991_s_at	M27487	HLA-DPA1	0.741780	6.944169e-16	3.210567e-11	4.013209e-12
9	208894_at	208306_x_at	NM_021983	HLA-DRB4	0.739879	8.992143e-16	4.157427e-11	4.619364e-12
10	208894_at	215193_x_at	AJ297586		0.735668	1.581309e-15	7.311025e-11	7.311025e-12
11	210982_s_at	203932_at	NM_002118	HLA-DMB	0.733003	2.248093e-15	1.039384e-10	9.448941e-12
12	208894_at	217478_s_at	X76775		0.730040	3.307442e-15	1.529163e-10	1.274302e-11
13	210982_s_at	204670_x_at	NM_002125		0.727780	4.425492e-15	2.046082e-10	1.573909e-11
14	210982_s_at	223280_x_at	AF253977	MS4A6A	0.721547	9.734160e-15	4.500491e-10	3.214637e-11
15	210982_s_at	224356_x_at	AF237908	MS4A6A	0.708071	4.985833e-14	2.305150e-9	1.536767e-10
16	208894_at	204670_x_at	NM_002125		0.707879	5.099988e-14	2.357928e-9	1.473705e-10
17	210982_s_at	211367_s_at	U13699	CASP1	0.700936	1.141212e-13	5.276281e-9	3.103695e-10
18	210982_s_at	223922_x_at	AB013104	MS4A6A	0.694135	2.457416e-13	1.136162e-8	6.312009e-10
19	208894_at	211367_s_at	U13699	CASP1	0.692778	2.856536e-13	1.320691e-8	6.951005e-10
20	210982_s_at	AFFX-HUMISGF3A/M97935_MB_at	AFFX-HUMISGF3A/M97935_MB	STAT1	0.685932	6.028426e-13	2.787183e-8	1.393591e-9
21	208894_at	203932_at	NM_002118	HLA-DMB	0.685557	6.276620e-13	2.901933e-8	1.381873e-9
22	208894_at	AFFX-HUMISGF3A/M97935_MB_at	AFFX-HUMISGF3A/M97935_MB	STAT1	0.684924	6.717759e-13	3.105889e-8	1.411768e-9
23	210982_s_at	201137_s_at	NM_002121	HLA-DPB1	0.683102	8.160835e-13	3.773080e-8	1.640470e-9
24	208894_at	211991_s_at	M27487	HLA-DPA1	0.672891	2.367557e-12	1.094616e-7	4.560901e-9
25	208894_at	223280_x_at	AF253977	MS4A6A	0.667690	4.007968e-12	1.853044e-7	7.412175e-9
26	208894_at	224356_x_at	AF237908	MS4A6A	0.663881	5.854930e-12	2.706968e-7	1.041142e-8
27	210982_s_at	1555728_a_at	AF354928	MS4A4A	0.660018	8.550912e-12	3.953428e-7	1.464233e-8
28	208894_at	AFFX-HUMISGF3A/M97935_MA_at	AFFX-HUMISGF3A/M97935_MA	STAT1	0.657191	1.124264e-11	5.197922e-7	1.856401e-8
29	210982_s_at	1567628_at	M28590	CD74	0.656257	1.229896e-11	5.686301e-7	1.960793e-8
30	208894_at	223922_x_at	AB013104	MS4A6A	0.650404	2.143578e-11	9.910620e-7	3.303540e-8
31	210982_s_at	AFFX-HUMISGF3A/M97935_MA_at	AFFX-HUMISGF3A/M97935_MA	STAT1	0.649640	2.302944e-11	1.064743e-6	3.434655e-8
32	208894_at	1567628_at	M28590	CD74	0.643669	4.003286e-11	1.850879e-6	5.783997e-8
33	210982_s_at	201847_at	NM_000235	LIPA	0.642471	4.466228e-11	2.064916e-6	6.257321e-8
34	210982_s_at	203416_at	NM_000560	CD53	0.641782	4.755548e-11	2.198680e-6	6.466707e-8
35	208894_at	1555728_a_at	AF354928	MS4A4A	0.641318	4.960241e-11	2.293318e-6	6.552337e-8
36	208894_at	201137_s_at	NM_002121	HLA-DPB1	0.640930	5.138038e-11	2.375521e-6	6.598669e-8
37	208894_at	219924_s_at	NM_007167	ZMYM6	0.632894	1.053582e-10	4.871130e-6	1.316522e-7
38	208894_at	207238_s_at	NM_002838	PTPRC	0.627504	1.685954e-10	7.794840e-6	2.051274e-7
39	208894_at	227265_at	AW135176	FGL2	0.627371	1.705469e-10	7.885064e-6	2.021811e-7
40	208894_at	216231_s_at	AW188940	B2M	0.626334	1.864835e-10	8.621880e-6	2.155470e-7
41	208894_at	214971_s_at	AV695711	ST6GAL1	0.623136	2.451597e-10	1.133471e-5	2.764564e-7
42	210982_s_at	219924_s_at	NM_007167	ZMYM6	0.618443	3.641972e-10	1.683829e-5	4.009117e-7
43	210982_s_at	207238_s_at	NM_002838	PTPRC	0.616473	4.292216e-10	1.984463e-5	4.615031e-7
44	210982_s_at	211732_x_at	BC005907	HNMT	0.616412	4.313703e-10	1.994397e-5	4.532722e-7
45	208894_at	201988_s_at	BF438056	CREBL2	0.615718	4.569488e-10	2.112657e-5	4.694794e-7
46	210982_s_at	224430_s_at	BC005808	MTO1	0.615005	4.847132e-10	2.241023e-5	4.871789e-7
47	210982_s_at	227265_at	AW135176	FGL2	0.614513	5.048040e-10	2.333911e-5	4.965768e-7
48	210982_s_at	226841_at	BF590697	MPEG1	0.613444	5.512779e-10	2.548778e-5	5.309955e-7
49	210982_s_at	223002_s_at	AL136841	XRN2	0.612932	5.749349e-10	2.658154e-5	5.424804e-7
50	210982_s_at	211366_x_at	U13698	CASP1	0.612844	5.790810e-10	2.677323e-5	5.354647e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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