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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
6394	208306_x_at	NM_021983	HLA-DRB4		major histocompatibility complex, class II, DR beta 4

Fetching correlation data, please wait...
Getting list of correlations for id 6394.
Getting list of p-values for id 6394.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.125 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	208306_x_at	209312_x_at	U65585		0.877261	7.276145e-28	1.682026e-23	1.682026e-23
2	208306_x_at	204670_x_at	NM_002125		0.866138	2.023380e-26	4.677447e-22	2.338724e-22
3	208306_x_at	215193_x_at	AJ297586		0.841259	1.302049e-23	3.009946e-19	1.003315e-19
4	208306_x_at	210982_s_at	M60333	HLA-DRA	0.834086	6.849256e-23	1.583342e-18	3.958356e-19
5	208306_x_at	217478_s_at	X76775		0.754520	1.157082e-16	2.674828e-12	5.349655e-13
6	208306_x_at	208894_at	M60334	HLA-DRA	0.739879	8.992143e-16	2.078714e-11	3.464523e-12
7	208306_x_at	211991_s_at	M27487	HLA-DPA1	0.730234	3.225408e-15	7.456176e-11	1.065168e-11
8	208306_x_at	203932_at	NM_002118	HLA-DMB	0.728755	3.904662e-15	9.026406e-11	1.128301e-11
9	208306_x_at	201137_s_at	NM_002121	HLA-DPB1	0.698763	1.461543e-13	3.378650e-9	3.754056e-10
10	208306_x_at	223280_x_at	AF253977	MS4A6A	0.647364	2.847132e-11	6.581715e-7	6.581715e-8
11	208306_x_at	1557116_at	BM980001	APOL6	0.643933	3.907486e-11	9.032937e-7	8.211760e-8
12	208306_x_at	202953_at	NM_000491	C1QB	0.639650	5.768672e-11	1.333544e-6	1.111287e-7
13	208306_x_at	226841_at	BF590697	MPEG1	0.631175	1.225284e-10	2.832490e-6	2.178838e-7
14	208306_x_at	224356_x_at	AF237908	MS4A6A	0.616935	4.130339e-10	9.548104e-6	6.820074e-7
15	208306_x_at	203104_at	NM_005211	CSF1R	0.611283	6.579443e-10	1.520970e-5	1.013980e-6
16	208306_x_at	1567628_at	M28590	CD74	0.610147	7.217335e-10	1.668431e-5	1.042770e-6
17	208306_x_at	204787_at	NM_007268	VSIG4	0.602035	1.382370e-9	3.195624e-5	1.879779e-6
18	208306_x_at	209619_at	K01144	CD74	0.598619	1.807691e-9	4.178839e-5	2.321577e-6
19	208306_x_at	210592_s_at	M55580	SAT1	0.594285	2.529178e-9	5.846702e-5	3.077211e-6
20	208306_x_at	223922_x_at	AB013104	MS4A6A	0.594175	2.550632e-9	5.896296e-5	2.948148e-6
21	208306_x_at	204834_at	NM_006682	FGL2	0.591311	3.175642e-9	7.341131e-5	3.495777e-6
22	208306_x_at	211366_x_at	U13698	CASP1	0.586971	4.408268e-9	1.019059e-4	4.632087e-6
23	208306_x_at	203645_s_at	NM_004244	CD163	0.581017	6.860559e-9	1.585955e-4	6.895459e-6
24	208306_x_at	200887_s_at	NM_007315	STAT1	0.579724	7.543148e-9	1.743750e-4	7.265623e-6
25	208306_x_at	201847_at	NM_000235	LIPA	0.575150	1.051669e-8	2.431143e-4	9.724572e-6
26	208306_x_at	201422_at	NM_006332	IFI30	0.571237	1.391893e-8	3.217639e-4	1.237553e-5
27	208306_x_at	38241_at	U90548	BTN3A3	0.570140	1.504768e-8	3.478572e-4	1.288360e-5
28	208306_x_at	200904_at	X56841	HLA-E	0.570139	1.504841e-8	3.478741e-4	1.242407e-5
29	208306_x_at	218559_s_at	NM_005461	MAFB	0.569195	1.608875e-8	3.719235e-4	1.282495e-5
30	208306_x_at	229937_x_at	AI681260	LILRB1	0.569114	1.618032e-8	3.740405e-4	1.246802e-5
31	208306_x_at	209970_x_at	M87507	CASP1	0.564953	2.166848e-8	5.009103e-4	1.615840e-5
32	208306_x_at	AFFX-HUMISGF3A/M97935_3_at	AFFX-HUMISGF3A/M97935_3	STAT1	0.562722	2.529943e-8	5.848470e-4	1.827647e-5
33	208306_x_at	204912_at	NM_001558	IL10RA	0.561922	2.673551e-8	6.180449e-4	1.872863e-5
34	208306_x_at	218232_at	NM_015991	C1QA	0.561464	2.759339e-8	6.378765e-4	1.876107e-5
35	208306_x_at	AFFX-HUMISGF3A/M97935_MB_at	AFFX-HUMISGF3A/M97935_MB	STAT1	0.557387	3.647448e-8	8.431806e-4	2.409087e-5
36	208306_x_at	202270_at	NM_002053	GBP1	0.555712	4.085947e-8	9.445484e-4	2.623746e-5
37	208306_x_at	200905_x_at	NM_005516	HLA-E	0.552485	5.076279e-8	1.173483e-3	3.171577e-5
38	208306_x_at	229367_s_at	AW130536	GIMAP6	0.552398	5.105820e-8	1.180312e-3	3.106085e-5
39	208306_x_at	215049_x_at	Z22969	CD163	0.550958	5.620670e-8	1.299330e-3	3.331616e-5
40	208306_x_at	226818_at	T64884	MPEG1	0.550897	5.643699e-8	1.304654e-3	3.261635e-5
41	208306_x_at	1555728_a_at	AF354928	MS4A4A	0.549673	6.121398e-8	1.415084e-3	3.451424e-5
42	208306_x_at	204829_s_at	NM_000803	FOLR2	0.543341	9.273798e-8	2.143824e-3	5.104342e-5
43	208306_x_at	219243_at	NM_018326	GIMAP4	0.542728	9.649870e-8	2.230761e-3	5.187815e-5
44	208306_x_at	203473_at	NM_007256	SLCO2B1	0.539172	1.213461e-7	2.805157e-3	6.375358e-5
45	208306_x_at	217456_x_at	M31183	HLA-E	0.538397	1.275156e-7	2.947778e-3	6.550617e-5
46	208306_x_at	226436_at	N49935	RASSF4	0.536654	1.424883e-7	3.293902e-3	7.160656e-5
47	208306_x_at	209732_at	BC005254	CLEC2B	0.535416	1.541228e-7	3.562857e-3	7.580546e-5
48	208306_x_at	211367_s_at	U13699	CASP1	0.532490	1.853190e-7	4.284020e-3	8.925041e-5
49	208306_x_at	204588_s_at	NM_003982	SLC7A7	0.531965	1.915101e-7	4.427140e-3	9.034980e-5
50	208306_x_at	227265_at	AW135176	FGL2	0.531917	1.920817e-7	4.440353e-3	8.880706e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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