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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
10946	217436_x_at	M80469	HLA-J		major histocompatibility complex, class I, J (pseudogene)

Fetching correlation data, please wait...
Getting list of correlations for id 10946.
Getting list of p-values for id 10946.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.138 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	217436_x_at	211528_x_at	M90685	HLA-G	0.911447	2.260290e-33	5.225113e-29	5.225113e-29
2	217436_x_at	208729_x_at	D83043	HLA-B	0.887755	2.315597e-29	5.352965e-25	2.676483e-25
3	217436_x_at	211529_x_at	M90684	HLA-G	0.886788	3.225987e-29	7.457514e-25	2.485838e-25
4	217436_x_at	210514_x_at	AF226990	HLA-G	0.877268	7.258482e-28	1.677943e-23	4.194858e-24
5	217436_x_at	211911_x_at	L07950	HLA-B	0.843952	6.833327e-24	1.579660e-19	3.159320e-20
6	217436_x_at	211530_x_at	M90686	HLA-G	0.841073	1.360860e-23	3.145899e-19	5.243165e-20
7	217436_x_at	221875_x_at	AW514210	HLA-F	0.836310	4.128975e-23	9.544951e-19	1.363564e-19
8	217436_x_at	204806_x_at	NM_018950	HLA-F	0.821962	9.540658e-22	2.205514e-17	2.756893e-18
9	217436_x_at	211799_x_at	U62824	HLA-C	0.820698	1.241140e-21	2.869143e-17	3.187937e-18
10	217436_x_at	209140_x_at	L42024	HLA-B	0.748116	2.886306e-16	6.672273e-12	6.672273e-13
11	217436_x_at	201781_s_at	AL558532	AIP	0.730016	3.317981e-15	7.670178e-11	6.972889e-12
12	217436_x_at	214459_x_at	M12679	HLA-C	0.721663	9.594593e-15	2.217982e-10	1.848318e-11
13	217436_x_at	207419_s_at	NM_002872	RAC2	0.718461	1.426911e-14	3.298590e-10	2.537377e-11
14	217436_x_at	209880_s_at	U02297	SELPLG	0.718106	1.490505e-14	3.445601e-10	2.461144e-11
15	217436_x_at	211121_s_at	AF180527	DOK1	0.715566	2.033214e-14	4.700180e-10	3.133453e-11
16	217436_x_at	1552977_a_at	NM_006586	CNPY3	0.711329	3.387860e-14	7.831716e-10	4.894822e-11
17	217436_x_at	201118_at	NM_002631	PGD	0.709380	4.271804e-14	9.875130e-10	5.808900e-11
18	217436_x_at	209499_x_at	BF448647		0.703239	8.759142e-14	2.024851e-9	1.124917e-10
19	217436_x_at	202354_s_at	AW190445	GTF2F1	0.702752	9.264787e-14	2.141741e-9	1.127232e-10
20	217436_x_at	215984_s_at	AL121845	ARFRP1	0.698817	1.452568e-13	3.357902e-9	1.678951e-10
21	217436_x_at	1555407_s_at	BC032232	FGD3	0.698368	1.528451e-13	3.533320e-9	1.682533e-10
22	217436_x_at	223025_s_at	AF290613	AP1M1	0.695621	2.082033e-13	4.813035e-9	2.187743e-10
23	217436_x_at	218215_s_at	NM_007121	NR1H2	0.693494	2.638495e-13	6.099408e-9	2.651917e-10
24	217436_x_at	211543_s_at	AF040752	GRK6	0.690337	3.737063e-13	8.638970e-9	3.599571e-10
25	217436_x_at	211102_s_at	U82277	LILRA2	0.687893	4.877253e-13	1.127475e-8	4.509899e-10
26	217436_x_at	211284_s_at	BC000324	GRN	0.681713	9.456851e-13	2.186140e-8	8.408232e-10
27	217436_x_at	209037_s_at	AW182860	EHD1	0.680829	1.038219e-12	2.400050e-8	8.889074e-10
28	217436_x_at	201050_at	NM_012268	PLD3	0.677508	1.470383e-12	3.399085e-8	1.213959e-9
29	217436_x_at	211495_x_at	AF114011		0.676261	1.673551e-12	3.868749e-8	1.334051e-9
30	217436_x_at	225294_s_at	BG340967	TRAPPC1	0.675742	1.766016e-12	4.082499e-8	1.360833e-9
31	217436_x_at	215313_x_at	AA573862	HLA-A	0.675681	1.777135e-12	4.108202e-8	1.325227e-9
32	217436_x_at	211101_x_at	U82276	LILRA2	0.674596	1.987494e-12	4.594489e-8	1.435778e-9
33	217436_x_at	213887_s_at	AI554759	POLR2E	0.673527	2.218217e-12	5.127851e-8	1.553894e-9
34	217436_x_at	202855_s_at	AL513917	SLC16A3	0.672949	2.353503e-12	5.440593e-8	1.600174e-9
35	217436_x_at	212025_s_at	BG421186	FLII	0.671543	2.716502e-12	6.279737e-8	1.794211e-9
36	217436_x_at	216388_s_at	U33448	LTB4R	0.669749	3.258202e-12	7.531986e-8	2.092218e-9
37	217436_x_at	222165_x_at	AK022885	C9orf16	0.667233	4.195878e-12	9.699610e-8	2.621516e-9
38	217436_x_at	200660_at	NM_005620	S100A11	0.667061	4.268626e-12	9.867784e-8	2.596785e-9
39	217436_x_at	209350_s_at	AL157493		0.665843	4.819850e-12	1.114205e-7	2.856935e-9
40	217436_x_at	209083_at	U34690	CORO1A	0.665755	4.862429e-12	1.124048e-7	2.810119e-9
41	217436_x_at	203381_s_at	N33009	APOE	0.665015	5.233064e-12	1.209727e-7	2.950555e-9
42	217436_x_at	211100_x_at	U82278	LILRA2	0.664948	5.267888e-12	1.217778e-7	2.899471e-9
43	217436_x_at	208540_x_at	NM_021039	S100A11	0.663473	6.095639e-12	1.409129e-7	3.277044e-9
44	217436_x_at	201950_x_at	NM_004930	CAPZB	0.662794	6.517053e-12	1.506547e-7	3.423971e-9
45	217436_x_at	1564494_s_at	AK075503	P4HB	0.661999	7.046297e-12	1.628892e-7	3.619761e-9
46	217436_x_at	1555730_a_at	D00682	CFL1	0.661392	7.477827e-12	1.728649e-7	3.757933e-9
47	217436_x_at	200739_s_at	BG338532	SUMO3	0.660914	7.835582e-12	1.811352e-7	3.853939e-9
48	217436_x_at	222429_at	AF077353	DBNL	0.660212	8.390855e-12	1.939714e-7	4.041071e-9
49	217436_x_at	216526_x_at	AK024836	HLA-C	0.657267	1.116056e-11	2.579987e-7	5.265279e-9
50	217436_x_at	1552667_a_at	NM_005489	SH2D3C	0.656601	1.189937e-11	2.750776e-7	5.501553e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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