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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 7 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
6382	208248_x_at	NM_001642	APLP2		amyloid beta (A4) precursor-like protein 2
6552	208702_x_at	AI525212	APLP2		amyloid beta (A4) precursor-like protein 2
6553	208703_s_at	BG427393	APLP2		amyloid beta (A4) precursor-like protein 2
6554	208704_x_at	BC000373	APLP2		amyloid beta (A4) precursor-like protein 2
8074	211404_s_at	BC004371	APLP2		amyloid beta (A4) precursor-like protein 2
10206	214875_x_at	AW001847	APLP2		amyloid beta (A4) precursor-like protein 2
17707	228520_s_at	AA022510	APLP2		amyloid beta (A4) precursor-like protein 2

Fetching correlation data, please wait...
Getting list of correlations for id 6382.
Getting list of p-values for id 6382.
1 of 7 done.
Getting list of correlations for id 6552.
Getting list of p-values for id 6552.
2 of 7 done.
Getting list of correlations for id 6553.
Getting list of p-values for id 6553.
3 of 7 done.
Getting list of correlations for id 6554.
Getting list of p-values for id 6554.
4 of 7 done.
Getting list of correlations for id 8074.
Getting list of p-values for id 8074.
5 of 7 done.
Getting list of correlations for id 10206.
Getting list of p-values for id 10206.
6 of 7 done.
Getting list of correlations for id 17707.
Getting list of p-values for id 17707.
7 of 7 done.
Calculating corrections for multiple testing (n=161819), please wait...
Done; whole program took 0.760 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	208248_x_at	208704_x_at	BC000373	APLP2	0.968942	1.583368e-51	2.562190e-46	2.562190e-46
2	208704_x_at	208248_x_at	NM_001642	APLP2	0.968942	1.583368e-51	2.562190e-46	1.281095e-46
3	214875_x_at	208702_x_at	AI525212	APLP2	0.943171	5.428500e-41	8.784345e-36	2.928115e-36
4	208702_x_at	214875_x_at	AW001847	APLP2	0.943171	5.428500e-41	8.784345e-36	2.196086e-36
5	228520_s_at	213350_at	BF680255	RPS11	0.903132	7.558202e-32	1.223061e-26	2.446121e-27
6	228520_s_at	207688_s_at	NM_005538	INHBC	0.894103	2.425452e-30	3.924842e-25	6.541404e-26
7	228520_s_at	213879_at	AV726646		0.889972	1.069671e-29	1.730931e-24	2.472758e-25
8	208702_x_at	210470_x_at	BC003129	NONO	0.887402	2.614289e-29	4.230416e-24	5.288020e-25
9	228520_s_at	213705_at	AW301861	MAT2A	0.886693	3.332696e-29	5.392935e-24	5.992150e-25
10	208703_s_at	217301_x_at	X71810	RBBP4	0.884640	6.669413e-29	1.079238e-23	1.079238e-24
11	208703_s_at	210470_x_at	BC003129	NONO	0.874405	1.760811e-27	2.849326e-22	2.590296e-23
12	228520_s_at	228477_at	R53084	ARGLU1	0.874276	1.831683e-27	2.964011e-22	2.470009e-23
13	208703_s_at	200672_x_at	NM_003128	SPTBN1	0.873849	2.085896e-27	3.375376e-22	2.596443e-23
14	208703_s_at	202730_s_at	NM_014456	PDCD4	0.873082	2.632316e-27	4.259587e-22	3.042562e-23
15	228520_s_at	213002_at	AA770596	MARCKS	0.872873	2.803981e-27	4.537374e-22	3.024916e-23
16	228520_s_at	213642_at	BE312027		0.871633	4.067877e-27	6.582597e-22	4.114123e-23
17	208703_s_at	222452_s_at	AA741071	GPBP1L1	0.870800	5.212846e-27	8.435375e-22	4.961985e-23
18	208702_x_at	211714_x_at	BC005838	TUBB	0.867560	1.345298e-26	2.176947e-21	1.209415e-22
19	228520_s_at	209972_s_at	AF116615	AIMP2	0.866692	1.726528e-26	2.793851e-21	1.470448e-22
20	214875_x_at	210470_x_at	BC003129	NONO	0.866405	1.874739e-26	3.033683e-21	1.516842e-22
21	208702_x_at	209026_x_at	AF141349	TUBB	0.865663	2.316432e-26	3.748427e-21	1.784965e-22
22	208248_x_at	201698_s_at	NM_003769	SRSF9	0.864239	3.464679e-26	5.606509e-21	2.548413e-22
23	208248_x_at	208703_s_at	BG427393	APLP2	0.863054	4.827240e-26	7.811391e-21	3.396257e-22
24	208703_s_at	208248_x_at	NM_001642	APLP2	0.863054	4.827240e-26	7.811391e-21	3.254746e-22
25	208703_s_at	208698_s_at	L14599	NONO	0.862647	5.406115e-26	8.748121e-21	3.499249e-22
26	208703_s_at	208622_s_at	AA670344	EZR	0.861426	7.573719e-26	1.225572e-20	4.713737e-22
27	208703_s_at	202731_at	NM_014456	PDCD4	0.859492	1.284117e-25	2.077945e-20	7.696091e-22
28	208703_s_at	200950_at	NM_006409	ARPC1A	0.859237	1.375623e-25	2.226019e-20	7.950069e-22
29	208702_x_at	201720_s_at	AI589086	LAPTM5	0.858420	1.714714e-25	2.774733e-20	9.568044e-22
30	228520_s_at	223577_x_at	AA827878	MALAT1	0.853408	6.426396e-25	1.039913e-19	3.466377e-21
31	214875_x_at	210337_s_at	U18197	ACLY	0.851233	1.123085e-24	1.817365e-19	5.862468e-21
32	208704_x_at	201698_s_at	NM_003769	SRSF9	0.851092	1.164171e-24	1.883850e-19	5.887031e-21
33	208703_s_at	214754_at	AB007861	TET3	0.847218	3.075182e-24	4.976229e-19	1.507948e-20
34	228520_s_at	213826_s_at	AA292281		0.845602	4.575832e-24	7.404566e-19	2.177813e-20
35	208703_s_at	200857_s_at	NM_006311	NCOR1	0.845096	5.177740e-24	8.378568e-19	2.393876e-20
36	208702_x_at	222460_s_at	AI655644	FAM192A	0.844494	5.992898e-24	9.697647e-19	2.693791e-20
37	208703_s_at	223160_s_at	AK024297	SMEK1	0.843992	6.768060e-24	1.095201e-18	2.960002e-20
38	208703_s_at	203482_at	AL133215	FAM178A	0.843842	7.017275e-24	1.135528e-18	2.988233e-20
39	208703_s_at	217960_s_at	NM_020243	TOMM22	0.842226	1.034403e-23	1.673860e-18	4.291949e-20
40	208702_x_at	223026_s_at	AF201946	VPS29	0.839830	1.824103e-23	2.951744e-18	7.379361e-20
41	228520_s_at	229076_s_at	AI808192		0.837910	2.855410e-23	4.620596e-18	1.126975e-19
42	208702_x_at	222452_s_at	AA741071	GPBP1L1	0.837101	3.442679e-23	5.570908e-18	1.326407e-19
43	214875_x_at	211919_s_at	AF348491	CXCR4	0.836755	3.728246e-23	6.033011e-18	1.403026e-19
44	214875_x_at	222452_s_at	AA741071	GPBP1L1	0.836407	4.037675e-23	6.533726e-18	1.484938e-19
45	208702_x_at	208703_s_at	BG427393	APLP2	0.835673	4.776754e-23	7.729696e-18	1.717710e-19
46	208703_s_at	208702_x_at	AI525212	APLP2	0.835673	4.776754e-23	7.729696e-18	1.680369e-19
47	208702_x_at	208698_s_at	L14599	NONO	0.833929	7.097670e-23	1.148538e-17	2.443698e-19
48	208702_x_at	201727_s_at	NM_001419	ELAVL1	0.833842	7.237158e-23	1.171110e-17	2.439812e-19
49	208703_s_at	AFFX-HSAC07/X00351_M_at	AFFX-HSAC07/X00351_M	ACTB	0.833561	7.711255e-23	1.247828e-17	2.546587e-19
50	228520_s_at	229204_at	BE218428		0.832881	8.984281e-23	1.453827e-17	2.907655e-19

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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