[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
5065	204683_at	NM_000873	ICAM2		intercellular adhesion molecule 2
9630	213620_s_at	AA126728	ICAM2		intercellular adhesion molecule 2

Fetching correlation data, please wait...
Getting list of correlations for id 5065.
Getting list of p-values for id 5065.
1 of 2 done.
Getting list of correlations for id 9630.
Getting list of p-values for id 9630.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.223 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204683_at	213620_s_at	AA126728	ICAM2	0.704785	7.322589e-14	3.385526e-9	3.385526e-9
2	213620_s_at	204683_at	NM_000873	ICAM2	0.704785	7.322589e-14	3.385526e-9	1.692763e-9
3	204683_at	225695_at	BG497776	C2orf18	0.675161	1.875138e-12	8.669511e-8	2.889837e-8
4	204683_at	218028_at	NM_016031	ELOVL1	0.667755	3.981987e-12	1.841032e-7	4.602579e-8
5	204683_at	217872_at	NM_017916	PIH1D1	0.664117	5.719832e-12	2.644507e-7	5.289015e-8
6	204683_at	232652_x_at	AF207829	SCAND1	0.660702	7.999669e-12	3.698567e-7	6.164278e-8
7	204683_at	201763_s_at	NM_001350	DAXX	0.655957	1.265816e-11	5.852375e-7	8.360536e-8
8	204683_at	219622_at	NM_017817	RAB20	0.655607	1.308917e-11	6.051647e-7	7.564559e-8
9	204683_at	201459_at	NM_006666	RUVBL2	0.652437	1.769900e-11	8.182957e-7	9.092174e-8
10	204683_at	218206_x_at	NM_016558	SCAND1	0.649957	2.235535e-11	1.033577e-6	1.033577e-7
11	204683_at	222216_s_at	AK026857	MRPL17	0.647241	2.879864e-11	1.331476e-6	1.210433e-7
12	204683_at	221539_at	AB044548	EIF4EBP1	0.645630	3.342898e-11	1.545555e-6	1.287963e-7
13	204683_at	204698_at	NM_002201	ISG20	0.645598	3.352905e-11	1.550182e-6	1.192448e-7
14	204683_at	217871_s_at	NM_002415	MIF	0.639701	5.742543e-11	2.655007e-6	1.896434e-7
15	213620_s_at	213399_x_at	AI560720	RPN2	0.636966	7.341472e-11	3.394256e-6	2.262837e-7
16	204683_at	216033_s_at	S74774	FYN	0.634235	9.359727e-11	4.327376e-6	2.704610e-7
17	204683_at	223056_s_at	AF298880	XPO5	0.632584	1.082754e-10	5.006006e-6	2.944710e-7
18	204683_at	214096_s_at	AW190316		0.629417	1.428372e-10	6.603934e-6	3.668852e-7
19	204683_at	214437_s_at	NM_005412	SHMT2	0.628187	1.589216e-10	7.347580e-6	3.867147e-7
20	204683_at	221263_s_at	NM_031287	SF3B5	0.621032	2.930024e-10	1.354667e-5	6.773337e-7
21	204683_at	218317_x_at	NM_024044		0.620617	3.034270e-10	1.402865e-5	6.680307e-7
22	204683_at	210213_s_at	AF022229	EIF6	0.619060	3.458693e-10	1.599092e-5	7.268601e-7
23	204683_at	213892_s_at	AA927724	APRT	0.618771	3.543572e-10	1.638335e-5	7.123197e-7
24	204683_at	219952_s_at	NM_020533	MCOLN1	0.618457	3.637918e-10	1.681955e-5	7.008146e-7
25	204683_at	207769_s_at	NM_005710	PQBP1	0.618206	3.714947e-10	1.717569e-5	6.870275e-7
26	213620_s_at	213491_x_at	AL514285	RPN2	0.618188	3.720641e-10	1.720201e-5	6.616158e-7
27	204683_at	202264_s_at	NM_006114	TOMM40	0.617296	4.008138e-10	1.853122e-5	6.863416e-7
28	204683_at	212411_at	BE747342	IMP4	0.617180	4.046874e-10	1.871032e-5	6.682256e-7
29	204683_at	218220_at	NM_021640	C12orf10	0.615669	4.587945e-10	2.121191e-5	7.314450e-7
30	204683_at	226060_at	BF475369	RFT1	0.615469	4.664731e-10	2.156692e-5	7.188973e-7
31	204683_at	224615_x_at	AL110115	HM13	0.613019	5.708622e-10	2.639324e-5	8.513949e-7
32	204683_at	57163_at	H93026	ELOVL1	0.609801	7.422878e-10	3.431893e-5	1.072467e-6
33	204683_at	201755_at	NM_006739	MCM5	0.608970	7.939714e-10	3.670847e-5	1.112378e-6
34	204683_at	202926_at	NM_015909	NBAS	0.608920	7.972092e-10	3.685817e-5	1.084064e-6
35	204683_at	200603_at	AL050038	PRKAR1A	-0.608906	7.980927e-10	3.689902e-5	1.054258e-6
36	204683_at	217893_s_at	NM_024595	AKIRIN1	0.608834	8.027664e-10	3.711510e-5	1.030975e-6
37	204683_at	225304_s_at	BE741920	NDUFA11	0.608737	8.091008e-10	3.740797e-5	1.011026e-6
38	204683_at	204710_s_at	NM_016003	WIPI2	0.608563	8.205266e-10	3.793623e-5	9.983218e-7
39	204683_at	200805_at	NM_006816	LMAN2	0.606181	9.938999e-10	4.595197e-5	1.178256e-6
40	204683_at	201494_at	NM_005040	PRCP	0.605605	1.040785e-9	4.811965e-5	1.202991e-6
41	204683_at	202140_s_at	NM_003992	CLK3	0.604472	1.139362e-9	5.267725e-5	1.284811e-6
42	204683_at	208689_s_at	BC003560	RPN2	0.604349	1.150542e-9	5.319417e-5	1.266528e-6
43	204683_at	208926_at	U84246	NEU1	0.603160	1.264555e-9	5.846544e-5	1.359661e-6
44	204683_at	209836_x_at	AF060511		0.601646	1.425447e-9	6.590412e-5	1.497821e-6
45	204683_at	212571_at	U00955	CHD8	0.600675	1.538662e-9	7.113848e-5	1.580855e-6
46	204683_at	203236_s_at	NM_009587	LGALS9	0.599278	1.716855e-9	7.937710e-5	1.725589e-6
47	204683_at	209482_at	BC001430	POP7	0.598986	1.756554e-9	8.121250e-5	1.727925e-6
48	204683_at	222867_s_at	AV760596	MED31	0.597865	1.917056e-9	8.863317e-5	1.846524e-6
49	204683_at	221972_s_at	AL571362	SDF4	0.597828	1.922596e-9	8.888932e-5	1.814068e-6
50	204683_at	222395_s_at	BE544096	UBE2Z	0.597770	1.931271e-9	8.929039e-5	1.785808e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation