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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4897	204416_x_at	NM_001645	APOC1		apolipoprotein C-I
9591	213553_x_at	W79394	APOC1		apolipoprotein C-I

Fetching correlation data, please wait...
Getting list of correlations for id 4897.
Getting list of p-values for id 4897.
1 of 2 done.
Getting list of correlations for id 9591.
Getting list of p-values for id 9591.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.150 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	213553_x_at	204416_x_at	NM_001645	APOC1	0.898376	4.893003e-31	2.262231e-26	2.262231e-26
2	204416_x_at	213553_x_at	W79394	APOC1	0.898376	4.893003e-31	2.262231e-26	1.131116e-26
3	204416_x_at	219952_s_at	NM_020533	MCOLN1	0.747608	3.099789e-16	1.433157e-11	4.777188e-12
4	204416_x_at	206680_at	NM_005894	CD5L	0.745840	3.968549e-16	1.834819e-11	4.587048e-12
5	204416_x_at	202953_at	NM_000491	C1QB	0.742295	6.472323e-16	2.992414e-11	5.984828e-12
6	213553_x_at	202953_at	NM_000491	C1QB	0.732825	2.301080e-15	1.063881e-10	1.773136e-11
7	204416_x_at	202838_at	NM_000147	FUCA1	0.710444	3.764978e-14	1.740700e-9	2.486714e-10
8	204416_x_at	218831_s_at	NM_004107	FCGRT	0.708326	4.838424e-14	2.236997e-9	2.796246e-10
9	204416_x_at	204829_s_at	NM_000803	FOLR2	0.708214	4.902566e-14	2.266653e-9	2.518503e-10
10	204416_x_at	1552280_at	NM_138379	TIMD4	0.696132	1.966007e-13	9.089638e-9	9.089638e-10
11	213553_x_at	1552280_at	NM_138379	TIMD4	0.695191	2.184393e-13	1.009932e-8	9.181202e-10
12	213553_x_at	204829_s_at	NM_000803	FOLR2	0.694218	2.434749e-13	1.125682e-8	9.380681e-10
13	204416_x_at	201050_at	NM_012268	PLD3	0.689986	3.883288e-13	1.795399e-8	1.381076e-9
14	204416_x_at	225353_s_at	AI184968	C1QC	0.684173	7.280155e-13	3.365907e-8	2.404219e-9
15	213553_x_at	204787_at	NM_007268	VSIG4	0.673269	2.277575e-12	1.053014e-7	7.020093e-9
16	204416_x_at	204787_at	NM_007268	VSIG4	0.670398	3.050962e-12	1.410582e-7	8.816137e-9
17	213553_x_at	218232_at	NM_015991	C1QA	0.667688	4.008690e-12	1.853378e-7	1.090222e-8
18	204416_x_at	203382_s_at	NM_000041	APOE	0.658080	1.031917e-11	4.770965e-7	2.650536e-8
19	204416_x_at	215049_x_at	Z22969	CD163	0.652959	1.684462e-11	7.787939e-7	4.098915e-8
20	204416_x_at	203665_at	NM_002133	HMOX1	0.651318	1.967029e-11	9.094363e-7	4.547182e-8
21	204416_x_at	203645_s_at	NM_004244	CD163	0.651141	2.000144e-11	9.247464e-7	4.403554e-8
22	204416_x_at	223454_at	AF275260	CXCL16	0.648812	2.488261e-11	1.150423e-6	5.229194e-8
23	204416_x_at	44673_at	N53555	SIGLEC1	0.647055	2.930160e-11	1.354730e-6	5.890132e-8
24	213553_x_at	200838_at	NM_001908	CTSB	0.646268	3.151526e-11	1.457077e-6	6.071153e-8
25	204416_x_at	219519_s_at	NM_023068	SIGLEC1	0.645009	3.539677e-11	1.636534e-6	6.546137e-8
26	204416_x_at	208146_s_at	NM_031311	CPVL	0.644361	3.757084e-11	1.737050e-6	6.680962e-8
27	204416_x_at	212884_x_at	AI358867	APOE	0.643850	3.937141e-11	1.820298e-6	6.741844e-8
28	204416_x_at	203473_at	NM_007256	SLCO2B1	0.641086	5.066077e-11	2.342250e-6	8.365179e-8
29	204416_x_at	1553851_at	NM_152323	SPIC	0.638770	6.244852e-11	2.887245e-6	9.956017e-8
30	204416_x_at	201141_at	NM_002510	GPNMB	0.634870	8.847616e-11	4.090607e-6	1.363536e-7
31	204416_x_at	218232_at	NM_015991	C1QA	0.634463	9.172942e-11	4.241018e-6	1.368070e-7
32	204416_x_at	228713_s_at	AI742586	HSD17B14	0.633839	9.693413e-11	4.481653e-6	1.400516e-7
33	204416_x_at	206214_at	NM_005084	PLA2G7	0.632577	1.083381e-10	5.008904e-6	1.517850e-7
34	204416_x_at	205098_at	AI421071	CCR1	0.631897	1.150087e-10	5.317312e-6	1.563915e-7
35	213553_x_at	203382_s_at	NM_000041	APOE	0.630588	1.289809e-10	5.963301e-6	1.703800e-7
36	204416_x_at	200838_at	NM_001908	CTSB	0.629767	1.385484e-10	6.405649e-6	1.779347e-7
37	213553_x_at	202838_at	NM_000147	FUCA1	0.626932	1.771340e-10	8.189612e-6	2.213409e-7
38	213553_x_at	222876_s_at	AI761520	ADAP2	0.620278	3.122231e-10	1.443532e-5	3.798769e-7
39	213553_x_at	203645_s_at	NM_004244	CD163	0.619481	3.338578e-10	1.543558e-5	3.957841e-7
40	204416_x_at	201847_at	NM_000235	LIPA	0.617079	4.081109e-10	1.886860e-5	4.717150e-7
41	213553_x_at	206680_at	NM_005894	CD5L	0.615685	4.582150e-10	2.118511e-5	5.167101e-7
42	213553_x_at	212788_x_at	BG537190	FTL	0.613859	5.327773e-10	2.463243e-5	5.864863e-7
43	213553_x_at	201050_at	NM_012268	PLD3	0.607843	8.696732e-10	4.020847e-5	9.350807e-7
44	204416_x_at	219622_at	NM_017817	RAB20	0.606428	9.744167e-10	4.505118e-5	1.023891e-6
45	213553_x_at	219519_s_at	NM_023068	SIGLEC1	0.605471	1.052006e-9	4.863843e-5	1.080854e-6
46	213553_x_at	228713_s_at	AI742586	HSD17B14	0.603508	1.230075e-9	5.687127e-5	1.236332e-6
47	204416_x_at	209264_s_at	AF054841	TSPAN4	0.600978	1.502465e-9	6.946497e-5	1.477978e-6
48	204416_x_at	201494_at	NM_005040	PRCP	0.600879	1.514158e-9	7.000560e-5	1.458450e-6
49	213553_x_at	219952_s_at	NM_020533	MCOLN1	0.597385	1.990081e-9	9.200942e-5	1.877743e-6
50	204416_x_at	204137_at	NM_003272	GPR137B	0.595014	2.390968e-9	1.105440e-4	2.210880e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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