[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
22555	39248_at	N74607	AQP3		aquaporin 3 (Gill blood group)
22556	39249_at	AB001325	AQP3		aquaporin 3 (Gill blood group)

Fetching correlation data, please wait...
Getting list of correlations for id 22555.
Getting list of p-values for id 22555.
1 of 2 done.
Getting list of correlations for id 22556.
Getting list of p-values for id 22556.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.262 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	39249_at	39248_at	N74607	AQP3	0.707617	5.259353e-14	2.431609e-9	2.431609e-9
2	39248_at	39249_at	AB001325	AQP3	0.707617	5.259353e-14	2.431609e-9	1.215805e-9
3	39248_at	209172_s_at	U30872	CENPF	0.668900	3.549369e-12	1.641015e-7	5.470051e-8
4	39248_at	208970_s_at	M14016	UROD	0.664981	5.251073e-12	2.427781e-7	6.069453e-8
5	39249_at	225156_at	AK001171	ELOF1	0.659500	8.992733e-12	4.157700e-7	8.315401e-8
6	39249_at	202290_at	NM_014891	PDAP1	0.646727	3.020649e-11	1.396567e-6	2.327612e-7
7	39248_at	201886_at	NM_025230	DCAF11	0.645507	3.381119e-11	1.563226e-6	2.233181e-7
8	39249_at	219257_s_at	NM_021972	SPHK1	0.638362	6.478144e-11	2.995105e-6	3.743881e-7
9	39249_at	215760_s_at	AC005390	SBNO2	0.637817	6.803278e-11	3.145427e-6	3.494919e-7
10	39249_at	1557749_at	AK092750	EHBP1L1	0.633933	9.612716e-11	4.444343e-6	4.444343e-7
11	39249_at	207824_s_at	NM_002383	MAZ	0.631988	1.140969e-10	5.275155e-6	4.795595e-7
12	39249_at	214484_s_at	AF226604	SIGMAR1	0.629851	1.375440e-10	6.359210e-6	5.299342e-7
13	39248_at	219110_at	NM_018983	GAR1	0.628421	1.557434e-10	7.200640e-6	5.538954e-7
14	39249_at	201551_s_at	J03263	LAMP1	0.628388	1.561805e-10	7.220851e-6	5.157751e-7
15	39248_at	225235_at	AW007710	TSPAN17	0.627459	1.692511e-10	7.825156e-6	5.216771e-7
16	39248_at	204767_s_at	BC000323	FEN1	0.626451	1.846143e-10	8.535458e-6	5.334661e-7
17	39248_at	206283_s_at	NM_003189	TAL1	0.626154	1.893959e-10	8.756531e-6	5.150901e-7
18	39248_at	1554522_at	BC021222	CNNM2	0.625715	1.966735e-10	9.093001e-6	5.051667e-7
19	39249_at	218045_x_at	NM_002824	PTMS	0.623227	2.432583e-10	1.124680e-5	5.919371e-7
20	39249_at	200642_at	NM_000454	SOD1	0.621643	2.782567e-10	1.286492e-5	6.432461e-7
21	39249_at	202416_at	NM_003315	DNAJC7	0.618480	3.630823e-10	1.678675e-5	7.993688e-7
22	39248_at	208476_s_at	NM_018027	FRMD4A	0.617370	3.983475e-10	1.841720e-5	8.371453e-7
23	39249_at	228123_s_at	AW303865	ABHD12	0.615493	4.655561e-10	2.152452e-5	9.358487e-7
24	39249_at	203511_s_at	AF041432	TRAPPC3	0.615079	4.817649e-10	2.227392e-5	9.280799e-7
25	39248_at	218350_s_at	NM_015895	GMNN	0.614524	5.043528e-10	2.331825e-5	9.327299e-7
26	39249_at	217876_at	NM_012087	GTF3C5	0.614249	5.159375e-10	2.385386e-5	9.174560e-7
27	39249_at	201043_s_at	NM_006305	ANP32A	0.613878	5.319452e-10	2.459396e-5	9.108873e-7
28	39248_at	213088_s_at	BE551340	DNAJC9	0.613749	5.376183e-10	2.485625e-5	8.877231e-7
29	39249_at	202692_s_at	NM_014233	UBTF	0.612849	5.788733e-10	2.676363e-5	9.228837e-7
30	39249_at	209440_at	BC001605	PRPS1	0.612215	6.097263e-10	2.819008e-5	9.396695e-7
31	39249_at	202779_s_at	NM_014501	UBE2S	0.612029	6.190786e-10	2.862248e-5	9.233059e-7
32	39248_at	217274_x_at	X52005	MYL4	0.610823	6.831287e-10	3.158377e-5	9.869929e-7
33	39249_at	217785_s_at	NM_006555	YKT6	0.609579	7.557584e-10	3.494174e-5	1.058840e-6
34	39249_at	209680_s_at	BC000712	KIFC1	0.609217	7.782935e-10	3.598362e-5	1.058342e-6
35	39249_at	211833_s_at	U19599	BAX	0.609071	7.875227e-10	3.641032e-5	1.040295e-6
36	39249_at	210240_s_at	U20498	CDKN2D	0.608464	8.271334e-10	3.824169e-5	1.062269e-6
37	39249_at	208917_x_at	BE674658	NADK	0.608119	8.505372e-10	3.932373e-5	1.062804e-6
38	39249_at	201684_s_at	BF001668	TOX4	0.607884	8.667486e-10	4.007325e-5	1.054559e-6
39	39249_at	213490_s_at	AI762811	MAP2K2	0.607853	8.689671e-10	4.017582e-5	1.030149e-6
40	39249_at	1552713_a_at	NM_000342	SLC4A1	0.606843	9.424923e-10	4.357519e-5	1.089380e-6
41	39249_at	224415_s_at	AF356515	HINT2	0.606452	9.725649e-10	4.496557e-5	1.096721e-6
42	39249_at	225235_at	AW007710	TSPAN17	0.605902	1.016385e-9	4.699153e-5	1.118846e-6
43	39248_at	235396_at	R24779	C22orf25	0.605755	1.028402e-9	4.754716e-5	1.105748e-6
44	39249_at	209208_at	AF059752	MPDU1	0.604631	1.124990e-9	5.201279e-5	1.182109e-6
45	39248_at	223133_at	BC001033	TMEM14B	0.604303	1.154727e-9	5.338764e-5	1.186392e-6
46	39249_at	221755_at	BG334196	EHBP1L1	0.603101	1.270441e-9	5.873757e-5	1.276904e-6
47	39249_at	224785_at	AI024869	FAM100B	0.602711	1.310391e-9	6.058461e-5	1.289034e-6
48	39248_at	226121_at	AI076793	DHRS13	0.602504	1.332019e-9	6.158457e-5	1.283012e-6
49	39249_at	213607_x_at	BE551347	NADK	0.601731	1.415905e-9	6.546294e-5	1.335978e-6
50	39248_at	201249_at	AI091047	SLC2A1	0.601710	1.418227e-9	6.557033e-5	1.311407e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation