[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 3 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
370	1554600_s_at	BC033088	LMNA		lamin A/C
4166	203411_s_at	NM_005572	LMNA		lamin A/C
8430	212086_x_at	AK026584	LMNA		lamin A/C

Fetching correlation data, please wait...
Getting list of correlations for id 370.
Getting list of p-values for id 370.
1 of 3 done.
Getting list of correlations for id 4166.
Getting list of p-values for id 4166.
2 of 3 done.
Getting list of correlations for id 8430.
Getting list of p-values for id 8430.
3 of 3 done.
Calculating corrections for multiple testing (n=69351), please wait...
Done; whole program took 0.301 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	1554600_s_at	203411_s_at	NM_005572	LMNA	0.908607	7.781913e-33	5.396835e-28	5.396835e-28
2	203411_s_at	1554600_s_at	BC033088	LMNA	0.908607	7.781913e-33	5.396835e-28	2.698417e-28
3	212086_x_at	203411_s_at	NM_005572	LMNA	0.822595	8.354977e-22	5.794260e-17	1.931420e-17
4	203411_s_at	212086_x_at	AK026584	LMNA	0.822595	8.354977e-22	5.794260e-17	1.448565e-17
5	1554600_s_at	212563_at	BG491842		0.821898	9.668993e-22	6.705543e-17	1.341109e-17
6	1554600_s_at	208255_s_at	NM_012181	FKBP8	0.818031	2.147481e-21	1.489300e-16	2.482166e-17
7	1554600_s_at	213490_s_at	AI762811	MAP2K2	0.808373	1.455345e-20	1.009296e-15	1.441852e-16
8	1554600_s_at	40850_at	L37033	FKBP8	0.807774	1.632842e-20	1.132392e-15	1.415490e-16
9	203411_s_at	208824_x_at	BC001048	CDK16	0.800055	6.946122e-20	4.817205e-15	5.352450e-16
10	203411_s_at	201895_at	NM_001654	ARAF	0.798090	9.942583e-20	6.895281e-15	6.895281e-16
11	203411_s_at	213318_s_at	BG028844	BAT3	0.797304	1.146286e-19	7.949606e-15	7.226914e-16
12	203411_s_at	210125_s_at	AF044773	BANF1	0.795602	1.556762e-19	1.079630e-14	8.996918e-16
13	203411_s_at	201361_at	NM_024092	TMEM109	0.794734	1.817646e-19	1.260555e-14	9.696580e-16
14	1554600_s_at	203931_s_at	NM_002949	MRPL12	0.793358	2.320540e-19	1.609318e-14	1.149513e-15
15	203411_s_at	201115_at	NM_006230	POLD2	0.792165	2.862970e-19	1.985498e-14	1.323665e-15
16	1554600_s_at	218813_s_at	NM_020145	SH3GLB2	0.791921	2.988411e-19	2.072493e-14	1.295308e-15
17	1554600_s_at	210125_s_at	AF044773	BANF1	0.788089	5.811751e-19	4.030508e-14	2.370887e-15
18	1554600_s_at	212484_at	BF974389	FAM89B	0.787867	6.037125e-19	4.186807e-14	2.326004e-15
19	203411_s_at	210208_x_at	BC003133	BAT3	0.785208	9.496133e-19	6.585663e-14	3.466138e-15
20	203411_s_at	202492_at	NM_024085	ATG9A	0.784208	1.124120e-18	7.795882e-14	3.897941e-15
21	203411_s_at	208831_x_at	D79984	SUPT6H	0.783796	1.204741e-18	8.355000e-14	3.978572e-15
22	1554600_s_at	218045_x_at	NM_002824	PTMS	0.783404	1.286633e-18	8.922930e-14	4.055877e-15
23	203411_s_at	201255_x_at	NM_004639	BAT3	0.781043	1.905986e-18	1.321820e-13	5.747044e-15
24	203411_s_at	91952_at	AI363375	DCAF15	0.780176	2.199345e-18	1.525268e-13	6.355282e-15
25	203411_s_at	212891_s_at	BF972185	GADD45GIP1	0.779940	2.286625e-18	1.585798e-13	6.343190e-15
26	1554600_s_at	91952_at	AI363375	DCAF15	0.779413	2.493307e-18	1.729133e-13	6.650513e-15
27	203411_s_at	204505_s_at	NM_001978	EPB49	0.778001	3.140679e-18	2.178092e-13	8.067009e-15
28	203411_s_at	208420_x_at	NM_003170	SUPT6H	0.777225	3.562594e-18	2.470695e-13	8.823909e-15
29	203411_s_at	200964_at	NM_003334	UBA1	0.777187	3.585179e-18	2.486357e-13	8.573646e-15
30	203411_s_at	212563_at	BG491842		0.776906	3.752123e-18	2.602135e-13	8.673782e-15
31	203411_s_at	200721_s_at	NM_005736	ACTR1A	0.776591	3.948132e-18	2.738069e-13	8.832481e-15
32	203411_s_at	208255_s_at	NM_012181	FKBP8	0.775262	4.890908e-18	3.391894e-13	1.059967e-14
33	1554600_s_at	202692_s_at	NM_014233	UBTF	0.774900	5.183572e-18	3.594859e-13	1.089351e-14
34	1554600_s_at	91703_at	AA149545	EHBP1L1	0.772498	7.599572e-18	5.270379e-13	1.550111e-14
35	203411_s_at	40850_at	L37033	FKBP8	0.771784	8.506902e-18	5.899621e-13	1.685606e-14
36	1554600_s_at	41657_at	AF035625	STK11	0.769582	1.201726e-17	8.334089e-13	2.315025e-14
37	203411_s_at	201802_at	NM_004955	SLC29A1	0.769272	1.261321e-17	8.747387e-13	2.364159e-14
38	203411_s_at	216105_x_at	X86428	PPP2R4	0.768984	1.319186e-17	9.148689e-13	2.407550e-14
39	1554600_s_at	204505_s_at	NM_001978	EPB49	0.768574	1.405955e-17	9.750437e-13	2.500112e-14
40	1554600_s_at	208336_s_at	NM_004868	TECR	0.767931	1.553172e-17	1.077140e-12	2.692851e-14
41	1554600_s_at	216105_x_at	X86428	PPP2R4	0.766303	1.996302e-17	1.384456e-12	3.376721e-14
42	1554600_s_at	1555735_a_at	AB002534	BAP1	0.766232	2.017949e-17	1.399468e-12	3.332066e-14
43	203411_s_at	212064_x_at	AI471665	MAZ	0.765674	2.198236e-17	1.524499e-12	3.545346e-14
44	203411_s_at	200055_at	NM_006284	TAF10	0.765665	2.201064e-17	1.526460e-12	3.469228e-14
45	203411_s_at	206452_x_at	NM_021131	PPP2R4	0.763971	2.849313e-17	1.976027e-12	4.391171e-14
46	203411_s_at	208336_s_at	NM_004868	TECR	0.763780	2.933074e-17	2.034116e-12	4.421991e-14
47	1554600_s_at	212064_x_at	AI471665	MAZ	0.763444	3.086296e-17	2.140377e-12	4.553994e-14
48	1554600_s_at	201895_at	NM_001654	ARAF	0.763161	3.221347e-17	2.234036e-12	4.654242e-14
49	1554600_s_at	209899_s_at	AF217197	PUF60	0.762932	3.334392e-17	2.312434e-12	4.719254e-14
50	203411_s_at	211047_x_at	BC006337	AP2S1	0.762636	3.486538e-17	2.417949e-12	4.835898e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation