[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 3 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
7698	210370_s_at	AF244129	LY9		lymphocyte antigen 9
10601	215967_s_at	AL582804	LY9		lymphocyte antigen 9
18759	231124_x_at	AI524095	LY9		lymphocyte antigen 9

Fetching correlation data, please wait...
Getting list of correlations for id 7698.
Getting list of p-values for id 7698.
1 of 3 done.
Getting list of correlations for id 10601.
Getting list of p-values for id 10601.
2 of 3 done.
Getting list of correlations for id 18759.
Getting list of p-values for id 18759.
3 of 3 done.
Calculating corrections for multiple testing (n=69351), please wait...
Done; whole program took 0.246 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	215967_s_at	223266_at	AB038950	STRADB	0.730738	3.021368e-15	2.095349e-10	2.095349e-10
2	210370_s_at	215967_s_at	AL582804	LY9	0.725366	6.020872e-15	4.175535e-10	2.087768e-10
3	215967_s_at	210370_s_at	AF244129	LY9	0.725366	6.020872e-15	4.175535e-10	1.391845e-10
4	215967_s_at	219672_at	NM_016633	AHSP	0.723246	7.868725e-15	5.457040e-10	1.364260e-10
5	215967_s_at	211434_s_at	AF015524	CCRL2	0.715370	2.082261e-14	1.444069e-9	2.888137e-10
6	215967_s_at	203554_x_at	NM_004219	PTTG1	0.701626	1.054562e-13	7.313493e-9	1.218916e-9
7	215967_s_at	221627_at	AF220123	TRIM10	0.700362	1.218605e-13	8.451149e-9	1.207307e-9
8	210370_s_at	217879_at	AL566824	CDC27	0.694739	2.297544e-13	1.593370e-8	1.991712e-9
9	210370_s_at	225133_at	AA130132	KLF3	0.691399	3.325828e-13	2.306495e-8	2.562772e-9
10	215967_s_at	213288_at	AI761250	MBOAT2	0.690316	3.745309e-13	2.597409e-8	2.597409e-9
11	215967_s_at	203966_s_at	NM_021003	PPM1A	0.686963	5.394192e-13	3.740926e-8	3.400842e-9
12	215967_s_at	218126_at	NM_018145	FAM82A2	0.686372	5.749656e-13	3.987444e-8	3.322870e-9
13	215967_s_at	239142_at	AI082852	RFESD	0.684027	7.394595e-13	5.128225e-8	3.944789e-9
14	210370_s_at	239142_at	AI082852	RFESD	0.681549	9.622404e-13	6.673233e-8	4.766595e-9
15	215967_s_at	201250_s_at	NM_006516	SLC2A1	0.680769	1.044822e-12	7.245943e-8	4.830629e-9
16	210370_s_at	213415_at	AI768628	CLIC2	0.679652	1.175068e-12	8.149215e-8	5.093260e-9
17	215967_s_at	208901_s_at	J03250	TOP1	0.679126	1.241760e-12	8.611732e-8	5.065725e-9
18	210370_s_at	203302_at	NM_000788	DCK	0.677881	1.414319e-12	9.808446e-8	5.449136e-9
19	210370_s_at	210681_s_at	AF153604	USP15	0.669979	3.183342e-12	2.207679e-7	1.161937e-8
20	215967_s_at	209714_s_at	AF213033	CDKN3	0.666793	4.384381e-12	3.040612e-7	1.520306e-8
21	210370_s_at	207220_at	NM_021071	ART4	0.666226	4.639544e-12	3.217570e-7	1.532176e-8
22	215967_s_at	236305_at	AI769245	RFESD	0.665673	4.901861e-12	3.399489e-7	1.545222e-8
23	210370_s_at	219672_at	NM_016633	AHSP	0.658857	9.571370e-12	6.637841e-7	2.886018e-8
24	215967_s_at	210638_s_at	AF176704	FBXO9	0.658744	9.676747e-12	6.710921e-7	2.796217e-8
25	215967_s_at	221479_s_at	AF060922	BNIP3L	0.657288	1.113853e-11	7.724683e-7	3.089873e-8
26	210370_s_at	205909_at	NM_002692	POLE2	0.656208	1.235693e-11	8.569656e-7	3.296022e-8
27	210370_s_at	222077_s_at	AU153848	RACGAP1	0.654807	1.413023e-11	9.799454e-7	3.629427e-8
28	215967_s_at	240336_at	AI242749	HBM	0.653531	1.595555e-11	1.106533e-6	3.951904e-8
29	231124_x_at	222838_at	AL121985	SLAMF7	0.649500	2.333342e-11	1.618196e-6	5.579986e-8
30	210370_s_at	203764_at	NM_014750	DLGAP5	0.647556	2.796830e-11	1.939629e-6	6.465431e-8
31	215967_s_at	205838_at	NM_002099		0.645355	3.428823e-11	2.377923e-6	7.670720e-8
32	210370_s_at	227801_at	N90779	TRIM59	0.645065	3.521638e-11	2.442291e-6	7.632160e-8
33	210370_s_at	223320_s_at	AF277184	ABCB10	0.639235	5.989069e-11	4.153479e-6	1.258630e-7
34	215967_s_at	226689_at	AI749451	CISD2	0.638563	6.362211e-11	4.412257e-6	1.297723e-7
35	215967_s_at	207220_at	NM_021071	ART4	0.637776	6.828257e-11	4.735464e-6	1.352990e-7
36	215967_s_at	223229_at	AB032931	UBE2T	0.637008	7.314153e-11	5.072438e-6	1.409011e-7
37	215967_s_at	218450_at	NM_015987	HEBP1	0.636333	7.768378e-11	5.387448e-6	1.456067e-7
38	215967_s_at	209735_at	AF098951	ABCG2	0.635064	8.697088e-11	6.031517e-6	1.587241e-7
39	215967_s_at	215819_s_at	N53959		0.627753	1.650013e-10	1.144301e-5	2.934105e-7
40	215967_s_at	229740_at	BF478120	LOC643008	0.627551	1.679164e-10	1.164517e-5	2.911292e-7
41	215967_s_at	1556283_s_at	W74643	FGFR1OP2	0.627430	1.696746e-10	1.176710e-5	2.870024e-7
42	215967_s_at	203436_at	NM_006413	RPP30	0.625579	1.989806e-10	1.379951e-5	3.285597e-7
43	210370_s_at	1554271_a_at	BC019022	CENPL	0.624358	2.209067e-10	1.532010e-5	3.562814e-7
44	215967_s_at	218864_at	AF116610	TNS1	0.623310	2.415556e-10	1.675212e-5	3.807301e-7
45	215967_s_at	218107_at	NM_025160	WDR26	0.621944	2.712673e-10	1.881266e-5	4.180591e-7
46	210370_s_at	208511_at	NM_021000	PTTG3P	0.621683	2.773155e-10	1.923211e-5	4.180893e-7
47	210370_s_at	225460_at	BG432489	SEC22C	0.620641	3.028321e-10	2.100171e-5	4.468449e-7
48	210370_s_at	218729_at	NM_020169	LXN	0.619327	3.382108e-10	2.345526e-5	4.886512e-7
49	215967_s_at	213115_at	AL031177	ATG4A	0.619142	3.434923e-10	2.382154e-5	4.861538e-7
50	215967_s_at	208335_s_at	NM_002036	DARC	0.618140	3.735626e-10	2.590694e-5	5.181388e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation