[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 5 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
1134	1560145_at	BQ942131	MKLN1		muskelin 1, intracellular mediator containing kelch motifs
4901	204423_at	NM_013255	MKLN1		muskelin 1, intracellular mediator containing kelch motifs
15617	225526_at	AW611917	MKLN1		muskelin 1, intracellular mediator containing kelch motifs
19679	235067_at	D81987	MKLN1		muskelin 1, intracellular mediator containing kelch motifs
21936	242984_at	BF723626	MKLN1		muskelin 1, intracellular mediator containing kelch motifs

Fetching correlation data, please wait...
Getting list of correlations for id 1134.
Getting list of p-values for id 1134.
1 of 5 done.
Getting list of correlations for id 4901.
Getting list of p-values for id 4901.
2 of 5 done.
Getting list of correlations for id 15617.
Getting list of p-values for id 15617.
3 of 5 done.
Getting list of correlations for id 19679.
Getting list of p-values for id 19679.
4 of 5 done.
Getting list of correlations for id 21936.
Getting list of p-values for id 21936.
5 of 5 done.
Calculating corrections for multiple testing (n=115585), please wait...
Done; whole program took 0.475 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	225526_at	1554471_a_at	BC028840	ANKRD13C	0.785211	9.490621e-19	1.096973e-13	1.096973e-13
2	225526_at	225998_at	AK022142	GAB1	0.763843	2.905404e-17	3.358211e-12	1.679106e-12
3	1560145_at	233037_at	AF138859		0.759950	5.212881e-17	6.025309e-12	2.008436e-12
4	235067_at	243338_at	AI674461	CSNK1A1	0.755887	9.484572e-17	1.096274e-11	2.740686e-12
5	225526_at	210768_x_at	AF274935	TMCO1	0.748092	2.896372e-16	3.347771e-11	6.695542e-12
6	1560145_at	214948_s_at	AL050136	TMF1	0.747109	3.324159e-16	3.842229e-11	6.403716e-12
7	235067_at	241458_at	AI868267	SETD2	0.745263	4.299476e-16	4.969549e-11	7.099356e-12
8	225526_at	205961_s_at	NM_004682	PSIP1	0.736830	1.354664e-15	1.565788e-10	1.957236e-11
9	1560145_at	226970_at	AI690694	FBXO33	0.736821	1.356232e-15	1.567601e-10	1.741779e-11
10	225526_at	202097_at	NM_005124	NUP153	0.733276	2.168801e-15	2.506808e-10	2.506808e-11
11	225526_at	202923_s_at	NM_001498	GCLC	0.732907	2.276374e-15	2.631147e-10	2.391951e-11
12	225526_at	223197_s_at	AI807204	SMARCAD1	0.732577	2.377142e-15	2.747619e-10	2.289683e-11
13	225526_at	218095_s_at	NM_018475	TMEM165	0.730382	3.164311e-15	3.657469e-10	2.813438e-11
14	225526_at	218379_at	NM_016090	RBM7	0.729711	3.451559e-15	3.989485e-10	2.849632e-11
15	225526_at	221751_at	AL565516	PANK3	0.728965	3.800432e-15	4.392730e-10	2.928487e-11
16	225526_at	212214_at	BF439570	OPA1	0.725743	5.739807e-15	6.634355e-10	4.146472e-11
17	225526_at	222467_s_at	AK023950	PPP6R3	0.723835	7.307035e-15	8.445836e-10	4.968139e-11
18	1560145_at	202682_s_at	NM_003363	USP4	0.722438	8.708753e-15	1.006601e-9	5.592229e-11
19	1560145_at	203943_at	NM_004798	KIF3B	0.719222	1.299041e-14	1.501496e-9	7.902611e-11
20	1560145_at	239516_at	AI806583		0.718761	1.375160e-14	1.589479e-9	7.947396e-11
21	1560145_at	231199_at	AA701676		0.716361	1.845599e-14	2.133236e-9	1.015827e-10
22	225526_at	234863_x_at	AK026197	FBXO5	0.715717	1.996296e-14	2.307419e-9	1.048827e-10
23	225526_at	235196_at	AA447464	CDC73	0.714255	2.383536e-14	2.755010e-9	1.197830e-10
24	235067_at	222726_s_at	BF696912	EXOC5	0.714017	2.453119e-14	2.835438e-9	1.181432e-10
25	235067_at	231989_s_at	AC003007	LOC641298	0.713785	2.522849e-14	2.916035e-9	1.166414e-10
26	225526_at	204887_s_at	NM_014264	PLK4	0.713706	2.547148e-14	2.944121e-9	1.132354e-10
27	225526_at	226002_at	AK022142	GAB1	0.713612	2.576039e-14	2.977515e-9	1.102783e-10
28	225526_at	211763_s_at	BC005979	UBE2B	0.713471	2.620267e-14	3.028635e-9	1.081655e-10
29	225526_at	226541_at	AI808182	FBXO30	0.712404	2.978724e-14	3.442958e-9	1.187227e-10
30	1560145_at	240128_at	H94876		0.712253	3.033286e-14	3.506023e-9	1.168674e-10
31	1560145_at	235035_at	BF342223	SLC35E1	0.711701	3.240524e-14	3.745560e-9	1.208245e-10
32	1560145_at	233019_at	AU145061	CNOT7	0.711291	3.403252e-14	3.933648e-9	1.229265e-10
33	235067_at	202886_s_at	M65254	PPP2R1B	0.709799	4.064439e-14	4.697882e-9	1.423601e-10
34	225526_at	213086_s_at	BF341845	CSNK1A1	0.709301	4.311976e-14	4.983997e-9	1.465882e-10
35	225526_at	223324_s_at	AF346629	TRPM7	0.707459	5.357929e-14	6.192962e-9	1.769418e-10
36	225526_at	203822_s_at	NM_006874	ELF2	0.707353	5.425326e-14	6.270863e-9	1.741906e-10
37	1560145_at	239264_at	AW973078		0.706319	6.124036e-14	7.078467e-9	1.913099e-10
38	235067_at	235484_at	BE892889	PTAR1	0.706109	6.276357e-14	7.254527e-9	1.909086e-10
39	1560145_at	212852_s_at	AL538601	TROVE2	0.706072	6.303573e-14	7.285985e-9	1.868201e-10
40	1560145_at	243170_at	AW291545		0.705956	6.389275e-14	7.385043e-9	1.846261e-10
41	225526_at	225644_at	BF060776	CCDC117	0.705892	6.437195e-14	7.440432e-9	1.814739e-10
42	1560145_at	221899_at	AI809961	N4BP2L2	0.705505	6.734611e-14	7.784200e-9	1.853381e-10
43	225526_at	209475_at	AF106069	USP15	0.703962	8.056675e-14	9.312307e-9	2.165653e-10
44	235067_at	213875_x_at	BG252842	C6orf62	0.703934	8.082256e-14	9.341876e-9	2.123154e-10
45	235067_at	244000_at	BF056209		0.703760	8.246893e-14	9.532171e-9	2.118260e-10
46	1560145_at	215191_at	AW836210		0.703238	8.760041e-14	1.012529e-8	2.201151e-10
47	1560145_at	236883_at	AI769104		0.702645	9.379509e-14	1.084130e-8	2.306661e-10
48	225526_at	209860_s_at	J04543	ANXA7	0.701914	1.020253e-13	1.179259e-8	2.456790e-10
49	225526_at	222574_s_at	BF431360	DHX40	0.701331	1.090729e-13	1.260720e-8	2.572897e-10
50	235067_at	1559881_s_at	BM463827	ZNF12	0.700558	1.191588e-13	1.377297e-8	2.754594e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation