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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 3 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
6185	207574_s_at	NM_015675	GADD45B		growth arrest and DNA-damage-inducible, beta
7084	209304_x_at	AF087853	GADD45B		growth arrest and DNA-damage-inducible, beta
7085	209305_s_at	AF078077	GADD45B		growth arrest and DNA-damage-inducible, beta

Fetching correlation data, please wait...
Getting list of correlations for id 6185.
Getting list of p-values for id 6185.
1 of 3 done.
Getting list of correlations for id 7084.
Getting list of p-values for id 7084.
2 of 3 done.
Getting list of correlations for id 7085.
Getting list of p-values for id 7085.
3 of 3 done.
Calculating corrections for multiple testing (n=69351), please wait...
Done; whole program took 0.343 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	207574_s_at	209304_x_at	AF087853	GADD45B	0.836481	3.970528e-23	2.753601e-18	2.753601e-18
2	209304_x_at	207574_s_at	NM_015675	GADD45B	0.836481	3.970528e-23	2.753601e-18	1.376800e-18
3	209304_x_at	1555889_a_at	BQ876971	CRTAP	0.763136	3.233567e-17	2.242511e-12	7.475036e-13
4	209305_s_at	1564494_s_at	AK075503	P4HB	0.749168	2.488545e-16	1.725831e-11	4.314577e-12
5	207574_s_at	218376_s_at	NM_022765	MICAL1	0.738733	1.049668e-15	7.279552e-11	1.455910e-11
6	207574_s_at	226267_at	AA716425	JDP2	0.724729	6.526566e-15	4.526239e-10	7.543731e-11
7	209305_s_at	211102_s_at	U82277	LILRA2	0.722519	8.620239e-15	5.978222e-10	8.540317e-11
8	207574_s_at	201206_s_at	NM_004587	RRBP1	0.716352	1.847757e-14	1.281438e-9	1.601797e-10
9	209305_s_at	1555407_s_at	BC032232	FGD3	0.715125	2.145199e-14	1.487717e-9	1.653019e-10
10	209305_s_at	211299_s_at	BC003683	FLOT2	0.713729	2.539824e-14	1.761394e-9	1.761394e-10
11	209304_x_at	203402_at	AL520102	KCNAB2	0.710581	3.703696e-14	2.568550e-9	2.335046e-10
12	209305_s_at	212016_s_at	AA679988	PTBP1	0.708464	4.760065e-14	3.301152e-9	2.750960e-10
13	209305_s_at	210514_x_at	AF226990	HLA-G	0.706910	5.714370e-14	3.962973e-9	3.048441e-10
14	209304_x_at	209040_s_at	U17496	PSMB8	0.703102	8.898554e-14	6.171236e-9	4.408026e-10
15	209305_s_at	208729_x_at	D83043	HLA-B	0.703049	8.952968e-14	6.208973e-9	4.139315e-10
16	209304_x_at	217977_at	NM_016332	SEPX1	0.700869	1.149969e-13	7.975149e-9	4.984468e-10
17	209304_x_at	213629_x_at	BF246115	MT1F	0.699484	1.346612e-13	9.338888e-9	5.493464e-10
18	207574_s_at	207809_s_at	NM_001183	ATP6AP1	0.698677	1.475824e-13	1.023499e-8	5.686104e-10
19	209305_s_at	202354_s_at	AW190445	GTF2F1	0.694950	2.244102e-13	1.556307e-8	8.191089e-10
20	209305_s_at	215984_s_at	AL121845	ARFRP1	0.694395	2.387276e-13	1.655600e-8	8.277999e-10
21	207574_s_at	209221_s_at	AI753638	OSBPL2	0.687587	5.042129e-13	3.496767e-8	1.665127e-9
22	207574_s_at	202545_at	NM_006254	PRKCD	0.687252	5.228006e-13	3.625675e-8	1.648034e-9
23	209305_s_at	212194_s_at	AI418892	TM9SF4	0.686751	5.518851e-13	3.827379e-8	1.664078e-9
24	209305_s_at	207419_s_at	NM_002872	RAC2	0.686319	5.782476e-13	4.010205e-8	1.670919e-9
25	209305_s_at	214040_s_at	BE675337	GSN	0.685696	6.183234e-13	4.288135e-8	1.715254e-9
26	207574_s_at	204949_at	NM_002162	ICAM3	0.684590	6.962149e-13	4.828320e-8	1.857046e-9
27	209304_x_at	212796_s_at	BF195608	TBC1D2B	0.683061	8.196576e-13	5.684408e-8	2.105336e-9
28	209304_x_at	204034_at	NM_014297	ETHE1	0.682183	8.997098e-13	6.239577e-8	2.228420e-9
29	209304_x_at	203155_at	NM_012432	SETDB1	0.681857	9.313260e-13	6.458839e-8	2.227186e-9
30	209304_x_at	218376_s_at	NM_022765	MICAL1	0.681152	1.003452e-12	6.959040e-8	2.319680e-9
31	209305_s_at	211797_s_at	U62296	NFYC	0.681083	1.010822e-12	7.010151e-8	2.261339e-9
32	209305_s_at	211672_s_at	AF019888		0.680542	1.070112e-12	7.421333e-8	2.319167e-9
33	209304_x_at	208018_s_at	NM_002110	HCK	0.679565	1.185892e-12	8.224277e-8	2.492205e-9
34	209305_s_at	201401_s_at	M80776	ADRBK1	0.679342	1.213913e-12	8.418609e-8	2.476061e-9
35	207574_s_at	210312_s_at	BC002640	IFT20	0.679210	1.230837e-12	8.535977e-8	2.438851e-9
36	207574_s_at	202957_at	NM_005335	HCLS1	0.678205	1.367319e-12	9.482494e-8	2.634026e-9
37	207574_s_at	34206_at	AB018325	ARAP1	0.677350	1.494698e-12	1.036588e-7	2.801590e-9
38	207574_s_at	225955_at	BG231494	METRNL	0.676307	1.665764e-12	1.155224e-7	3.040062e-9
39	209304_x_at	202659_at	NM_002801	PSMB10	0.674909	1.924622e-12	1.334745e-7	3.422423e-9
40	207574_s_at	1555889_a_at	BQ876971	CRTAP	0.674292	2.050764e-12	1.422226e-7	3.555564e-9
41	207574_s_at	212443_at	AB011112	NBEAL2	0.673711	2.176901e-12	1.509703e-7	3.682202e-9
42	209304_x_at	212156_at	AA812224	VPS39	0.673613	2.198892e-12	1.524953e-7	3.630841e-9
43	207574_s_at	203402_at	AL520102	KCNAB2	0.673593	2.203196e-12	1.527938e-7	3.553345e-9
44	207574_s_at	232543_x_at	BE675685	ARHGAP9	0.672208	2.538572e-12	1.760525e-7	4.001193e-9
45	207574_s_at	224583_at	AL565621	COTL1	0.672106	2.565128e-12	1.778942e-7	3.953204e-9
46	207574_s_at	208018_s_at	NM_002110	HCK	0.671612	2.697296e-12	1.870602e-7	4.066525e-9
47	209304_x_at	217990_at	NM_016576	GMPR2	0.670635	2.978754e-12	2.065796e-7	4.395310e-9
48	209305_s_at	222977_at	AL518882	SURF4	0.670566	2.999465e-12	2.080159e-7	4.333664e-9
49	209304_x_at	208749_x_at	AF085357	FLOT1	0.669829	3.231800e-12	2.241286e-7	4.574052e-9
50	209304_x_at	207677_s_at	NM_013416	NCF4	0.669702	3.273551e-12	2.270241e-7	4.540481e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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