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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
5322	205147_x_at	NM_000631	NCF4		neutrophil cytosolic factor 4, 40kDa
6215	207677_s_at	NM_013416	NCF4		neutrophil cytosolic factor 4, 40kDa

Fetching correlation data, please wait...
Getting list of correlations for id 5322.
Getting list of p-values for id 5322.
1 of 2 done.
Getting list of correlations for id 6215.
Getting list of p-values for id 6215.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.211 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	205147_x_at	207677_s_at	NM_013416	NCF4	0.911657	2.058960e-33	9.519397e-29	9.519397e-29
2	207677_s_at	205147_x_at	NM_000631	NCF4	0.911657	2.058960e-33	9.519397e-29	4.759698e-29
3	207677_s_at	202545_at	NM_006254	PRKCD	0.887691	2.367539e-29	1.094608e-24	3.648694e-25
4	207677_s_at	209083_at	U34690	CORO1A	0.873438	2.363676e-27	1.092822e-22	2.732055e-23
5	207677_s_at	217977_at	NM_016332	SEPX1	0.861880	6.683652e-26	3.090120e-21	6.180239e-22
6	207677_s_at	206380_s_at	NM_002621	CFP	0.852732	7.650612e-25	3.537184e-20	5.895306e-21
7	207677_s_at	203591_s_at	NM_000760	CSF3R	0.849335	1.814878e-24	8.390905e-20	1.198701e-20
8	207677_s_at	214523_at	NM_001805	CEBPE	0.849073	1.937770e-24	8.959087e-20	1.119886e-20
9	207677_s_at	213733_at	BF740152	MYO1F	0.843138	8.313901e-24	3.843849e-19	4.270944e-20
10	207677_s_at	203402_at	AL520102	KCNAB2	0.842630	9.390866e-24	4.341773e-19	4.341773e-20
11	207677_s_at	210981_s_at	AF040751	GRK6	0.842393	9.940775e-24	4.596018e-19	4.178198e-20
12	205147_x_at	201118_at	NM_002631	PGD	0.841667	1.181679e-23	5.463374e-19	4.552812e-20
13	207677_s_at	201482_at	NM_002826	QSOX1	0.841362	1.270530e-23	5.874167e-19	4.518590e-20
14	207677_s_at	220023_at	NM_018690	APOB48R	0.839084	2.172735e-23	1.004542e-18	7.175302e-20
15	205147_x_at	209083_at	U34690	CORO1A	0.837446	3.178693e-23	1.469637e-18	9.797580e-20
16	205147_x_at	217977_at	NM_016332	SEPX1	0.831566	1.204687e-22	5.569752e-18	3.481095e-19
17	207677_s_at	243099_at	AW271350	NFAM1	0.830459	1.539140e-22	7.116059e-18	4.185917e-19
18	207677_s_at	241742_at	AW027174	PRAM1	0.830126	1.656554e-22	7.658910e-18	4.254950e-19
19	207677_s_at	204411_at	NM_017596	KIF21B	0.829332	1.972019e-22	9.117431e-18	4.798648e-19
20	207677_s_at	211178_s_at	AF038602	PSTPIP1	0.828671	2.278365e-22	1.053379e-17	5.266897e-19
21	207677_s_at	202848_s_at	BG423052	GRK6	0.826253	3.844042e-22	1.777254e-17	8.463116e-19
22	207677_s_at	222429_at	AF077353	DBNL	0.825523	4.494684e-22	2.078072e-17	9.445782e-19
23	207677_s_at	208438_s_at	NM_005248	FGR	0.824521	5.564498e-22	2.572690e-17	1.118561e-18
24	207677_s_at	205936_s_at	NM_002115	HK3	0.824257	5.884889e-22	2.720820e-17	1.133675e-18
25	207677_s_at	1553297_a_at	NM_172313	CSF3R	0.821647	1.018758e-21	4.710127e-17	1.884051e-18
26	207677_s_at	224612_s_at	AI935180	DNAJC5	0.818569	1.923983e-21	8.895344e-17	3.421286e-18
27	207677_s_at	207384_at	NM_005091	PGLYRP1	0.814053	4.787169e-21	2.213300e-16	8.197407e-18
28	207677_s_at	204034_at	NM_014297	ETHE1	0.813334	5.522454e-21	2.553251e-16	9.118754e-18
29	207677_s_at	208018_s_at	NM_002110	HCK	0.811185	8.431776e-21	3.898347e-16	1.344258e-17
30	207677_s_at	203047_at	NM_005990	STK10	0.810719	9.234995e-21	4.269708e-16	1.423236e-17
31	205147_x_at	203555_at	NM_014369	PTPN18	0.809942	1.074421e-20	4.967476e-16	1.602412e-17
32	207677_s_at	204164_at	NM_006747	SIPA1	0.809423	1.188122e-20	5.493163e-16	1.716614e-17
33	207677_s_at	226405_s_at	AK001822	ARRDC1	0.805952	2.311512e-20	1.068705e-15	3.238499e-17
34	205147_x_at	1553297_a_at	NM_172313	CSF3R	0.805194	2.668047e-20	1.233545e-15	3.628073e-17
35	205147_x_at	202545_at	NM_006254	PRKCD	0.804726	2.914439e-20	1.347462e-15	3.849891e-17
36	207677_s_at	201118_at	NM_002631	PGD	0.804515	3.032859e-20	1.402212e-15	3.895033e-17
37	207677_s_at	212443_at	AB011112	NBEAL2	0.803898	3.405206e-20	1.574363e-15	4.255035e-17
38	207677_s_at	225750_at	BE966748		0.803860	3.429790e-20	1.585729e-15	4.172972e-17
39	207677_s_at	218376_s_at	NM_022765	MICAL1	0.803733	3.512326e-20	1.623889e-15	4.163818e-17
40	207677_s_at	216026_s_at	AL080203	POLE	0.802991	4.035345e-20	1.865701e-15	4.664253e-17
41	207677_s_at	205418_at	NM_002005	FES	0.802716	4.247794e-20	1.963925e-15	4.790061e-17
42	207677_s_at	203175_at	NM_001665	RHOG	0.802476	4.441484e-20	2.053476e-15	4.889228e-17
43	205147_x_at	1555349_a_at	L78790	ITGB2	0.802472	4.445010e-20	2.055106e-15	4.779317e-17
44	207677_s_at	211100_x_at	U82278	LILRA2	0.802140	4.727688e-20	2.185799e-15	4.967725e-17
45	207677_s_at	211101_x_at	U82276	LILRA2	0.801733	5.097984e-20	2.357002e-15	5.237782e-17
46	207677_s_at	206687_s_at	NM_002831	PTPN6	0.801674	5.154325e-20	2.383051e-15	5.180545e-17
47	205147_x_at	212625_at	NM_003765	STX10	0.801614	5.211555e-20	2.409510e-15	5.126618e-17
48	207677_s_at	225059_at	BE875567	AGTRAP	0.799876	7.178405e-20	3.318864e-15	6.914299e-17
49	205147_x_at	202848_s_at	BG423052	GRK6	0.799755	7.339664e-20	3.393420e-15	6.925348e-17
50	207677_s_at	212748_at	AB037859	MKL1	0.798171	9.796922e-20	4.529509e-15	9.059018e-17

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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